data_9DU9 # _model_server_result.job_id UYvwwElRkZQoh-laT9hBbw _model_server_result.datetime_utc '2025-03-24 23:17:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9du9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 9DU9 # _exptl.entry_id 9DU9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9DU9 _cell.length_a 57.437 _cell.length_b 79.552 _cell.length_c 91.796 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9DU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 104 A ALA 104 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc2 A OE1 GLU 120 A GLU 120 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc3 A OE2 GLU 124 A GLU 124 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc4 A OE2 GLU 124 A GLU 124 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc5 A OE2 GLU 172 A GLU 172 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc6 C O3B GDP . A GDP 301 1_555 D MG MG . A MG 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc7 C O3B GDP . A GDP 301 1_555 D MG MG . A MG 302 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc8 C O3B GDP . A GDP 301 1_555 E MG MG . A MG 303 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc9 D MG MG . A MG 302 1_555 I O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc10 D MG MG . A MG 302 1_555 I O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc11 D MG MG . A MG 302 1_555 I O HOH . A HOH 449 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.271 ? metalc ? metalc12 D MG MG . A MG 302 1_555 I O HOH . A HOH 519 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.088 ? metalc ? metalc13 E MG MG . A MG 303 1_555 I O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc14 E MG MG . A MG 303 1_555 I O HOH . A HOH 449 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.118 ? metalc ? metalc15 E MG MG . A MG 303 1_555 I O HOH . A HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc16 B O ALA 104 B ALA 104 1_555 H MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc17 B OE1 GLU 120 B GLU 120 1_555 G MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc18 B OE2 GLU 124 B GLU 124 1_555 G MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc19 B OE2 GLU 124 B GLU 124 1_555 H MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc20 B OE2 GLU 172 B GLU 172 1_555 G MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc21 F O3B GDP . B GDP 301 1_555 G MG MG . B MG 302 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc22 F O3B GDP . B GDP 301 1_555 H MG MG . B MG 303 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc23 F O3B GDP . B GDP 301 1_555 H MG MG . B MG 303 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc24 G MG MG . B MG 302 1_555 J O HOH . B HOH 411 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.01 ? metalc ? metalc25 G MG MG . B MG 302 1_555 J O HOH . B HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc26 G MG MG . B MG 302 1_555 J O HOH . B HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc27 H MG MG . B MG 303 1_555 J O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc28 H MG MG . B MG 303 1_555 J O HOH . B HOH 411 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.3 ? metalc ? metalc29 H MG MG . B MG 303 1_555 J O HOH . B HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc30 H MG MG . B MG 303 1_555 J O HOH . B HOH 433 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.116 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 70 n n PB O2B GDP sing 71 n n PB O3B GDP sing 72 n n PB O3A GDP sing 73 n n O2B HOB2 GDP sing 74 n n O3B HOB3 GDP sing 75 n n O3A PA GDP sing 76 n n PA O1A GDP doub 77 n n PA O2A GDP sing 78 n n PA O5' GDP sing 79 n n O2A HOA2 GDP sing 80 n n O5' C5' GDP sing 81 n n C5' C4' GDP sing 82 n n C5' H5' GDP sing 83 n n C5' "H5''" GDP sing 84 n n C4' O4' GDP sing 85 n n C4' C3' GDP sing 86 n n C4' H4' GDP sing 87 n n O4' C1' GDP sing 88 n n C3' O3' GDP sing 89 n n C3' C2' GDP sing 90 n n C3' H3' GDP sing 91 n n O3' HO3' GDP sing 92 n n C2' O2' GDP sing 93 n n C2' C1' GDP sing 94 n n C2' H2' GDP sing 95 n n O2' HO2' GDP sing 96 n n C1' N9 GDP sing 97 n n C1' H1' GDP sing 98 n n N9 C8 GDP sing 99 n y N9 C4 GDP sing 100 n y C8 N7 GDP doub 101 n y C8 H8 GDP sing 102 n n N7 C5 GDP sing 103 n y C5 C6 GDP sing 104 n n C5 C4 GDP doub 105 n y C6 O6 GDP doub 106 n n C6 N1 GDP sing 107 n n N1 C2 GDP sing 108 n n N1 HN1 GDP sing 109 n n C2 N2 GDP sing 110 n n C2 N3 GDP doub 111 n n N2 HN21 GDP sing 112 n n N2 HN22 GDP sing 113 n n N3 C4 GDP sing 114 n n # _atom_sites.entry_id 9DU9 _atom_sites.fract_transf_matrix[1][1] 0.01741 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01257 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP A 1 301 2 GDP GDP . D 3 MG A 1 302 2 MG MG . E 3 MG A 1 303 3 MG MG . F 2 GDP B 1 301 1 GDP GDP . G 3 MG B 1 302 1 MG MG . H 3 MG B 1 303 5 MG MG . I 4 HOH A 1 401 123 HOH HOH . I 4 HOH A 2 402 67 HOH HOH . I 4 HOH A 3 403 294 HOH HOH . I 4 HOH A 4 404 293 HOH HOH . I 4 HOH A 5 405 46 HOH HOH . I 4 HOH A 6 406 242 HOH HOH . I 4 HOH A 7 407 62 HOH HOH . I 4 HOH A 8 408 164 HOH HOH . I 4 HOH A 9 409 99 HOH HOH . I 4 HOH A 10 410 40 HOH HOH . I 4 HOH A 11 411 80 HOH HOH . I 4 HOH A 12 412 91 HOH HOH . I 4 HOH A 13 413 258 HOH HOH . I 4 HOH A 14 414 194 HOH HOH . I 4 HOH A 15 415 182 HOH HOH . I 4 HOH A 16 416 257 HOH HOH . I 4 HOH A 17 417 210 HOH HOH . I 4 HOH A 18 418 133 HOH HOH . I 4 HOH A 19 419 36 HOH HOH . I 4 HOH A 20 420 177 HOH HOH . I 4 HOH A 21 421 300 HOH HOH . I 4 HOH A 22 422 60 HOH HOH . I 4 HOH A 23 423 71 HOH HOH . I 4 HOH A 24 424 154 HOH HOH . I 4 HOH A 25 425 280 HOH HOH . I 4 HOH A 26 426 282 HOH HOH . I 4 HOH A 27 427 156 HOH HOH . I 4 HOH A 28 428 165 HOH HOH . I 4 HOH A 29 429 21 HOH HOH . I 4 HOH A 30 430 77 HOH HOH . I 4 HOH A 31 431 126 HOH HOH . I 4 HOH A 32 432 29 HOH HOH . I 4 HOH A 33 433 41 HOH HOH . I 4 HOH A 34 434 285 HOH HOH . I 4 HOH A 35 435 102 HOH HOH . I 4 HOH A 36 436 134 HOH HOH . I 4 HOH A 37 437 161 HOH HOH . I 4 HOH A 38 438 22 HOH HOH . I 4 HOH A 39 439 248 HOH HOH . I 4 HOH A 40 440 65 HOH HOH . I 4 HOH A 41 441 33 HOH HOH . I 4 HOH A 42 442 306 HOH HOH . I 4 HOH A 43 443 315 HOH HOH . I 4 HOH A 44 444 37 HOH HOH . I 4 HOH A 45 445 15 HOH HOH . I 4 HOH A 46 446 135 HOH HOH . I 4 HOH A 47 447 93 HOH HOH . I 4 HOH A 48 448 122 HOH HOH . I 4 HOH A 49 449 340 HOH HOH . I 4 HOH A 50 450 107 HOH HOH . I 4 HOH A 51 451 187 HOH HOH . I 4 HOH A 52 452 261 HOH HOH . I 4 HOH A 53 453 197 HOH HOH . I 4 HOH A 54 454 73 HOH HOH . I 4 HOH A 55 455 212 HOH HOH . I 4 HOH A 56 456 44 HOH HOH . I 4 HOH A 57 457 207 HOH HOH . I 4 HOH A 58 458 101 HOH HOH . I 4 HOH A 59 459 159 HOH HOH . I 4 HOH A 60 460 138 HOH HOH . I 4 HOH A 61 461 160 HOH HOH . I 4 HOH A 62 462 58 HOH HOH . I 4 HOH A 63 463 284 HOH HOH . I 4 HOH A 64 464 155 HOH HOH . I 4 HOH A 65 465 4 HOH HOH . I 4 HOH A 66 466 103 HOH HOH . I 4 HOH A 67 467 113 HOH HOH . I 4 HOH A 68 468 12 HOH HOH . I 4 HOH A 69 469 295 HOH HOH . I 4 HOH A 70 470 57 HOH HOH . I 4 HOH A 71 471 311 HOH HOH . I 4 HOH A 72 472 125 HOH HOH . I 4 HOH A 73 473 211 HOH HOH . I 4 HOH A 74 474 148 HOH HOH . I 4 HOH A 75 475 6 HOH HOH . I 4 HOH A 76 476 176 HOH HOH . I 4 HOH A 77 477 95 HOH HOH . I 4 HOH A 78 478 201 HOH HOH . I 4 HOH A 79 479 129 HOH HOH . I 4 HOH A 80 480 11 HOH HOH . I 4 HOH A 81 481 13 HOH HOH . I 4 HOH A 82 482 50 HOH HOH . I 4 HOH A 83 483 143 HOH HOH . I 4 HOH A 84 484 94 HOH HOH . I 4 HOH A 85 485 38 HOH HOH . I 4 HOH A 86 486 180 HOH HOH . I 4 HOH A 87 487 35 HOH HOH . I 4 HOH A 88 488 66 HOH HOH . I 4 HOH A 89 489 184 HOH HOH . I 4 HOH A 90 490 109 HOH HOH . I 4 HOH A 91 491 56 HOH HOH . I 4 HOH A 92 492 27 HOH HOH . I 4 HOH A 93 493 191 HOH HOH . I 4 HOH A 94 494 217 HOH HOH . I 4 HOH A 95 495 213 HOH HOH . I 4 HOH A 96 496 87 HOH HOH . I 4 HOH A 97 497 89 HOH HOH . I 4 HOH A 98 498 299 HOH HOH . I 4 HOH A 99 499 303 HOH HOH . I 4 HOH A 100 500 264 HOH HOH . I 4 HOH A 101 501 221 HOH HOH . I 4 HOH A 102 502 179 HOH HOH . I 4 HOH A 103 503 45 HOH HOH . I 4 HOH A 104 504 240 HOH HOH . I 4 HOH A 105 505 23 HOH HOH . I 4 HOH A 106 506 173 HOH HOH . I 4 HOH A 107 507 170 HOH HOH . I 4 HOH A 108 508 63 HOH HOH . I 4 HOH A 109 509 61 HOH HOH . I 4 HOH A 110 510 14 HOH HOH . I 4 HOH A 111 511 55 HOH HOH . I 4 HOH A 112 512 153 HOH HOH . I 4 HOH A 113 513 72 HOH HOH . I 4 HOH A 114 514 338 HOH HOH . I 4 HOH A 115 515 339 HOH HOH . I 4 HOH A 116 516 144 HOH HOH . I 4 HOH A 117 517 20 HOH HOH . I 4 HOH A 118 518 321 HOH HOH . I 4 HOH A 119 519 342 HOH HOH . I 4 HOH A 120 520 243 HOH HOH . I 4 HOH A 121 521 9 HOH HOH . I 4 HOH A 122 522 92 HOH HOH . I 4 HOH A 123 523 97 HOH HOH . I 4 HOH A 124 524 24 HOH HOH . I 4 HOH A 125 525 310 HOH HOH . I 4 HOH A 126 526 304 HOH HOH . I 4 HOH A 127 527 330 HOH HOH . I 4 HOH A 128 528 31 HOH HOH . I 4 HOH A 129 529 137 HOH HOH . I 4 HOH A 130 530 112 HOH HOH . I 4 HOH A 131 531 166 HOH HOH . I 4 HOH A 132 532 81 HOH HOH . I 4 HOH A 133 533 86 HOH HOH . I 4 HOH A 134 534 75 HOH HOH . I 4 HOH A 135 535 106 HOH HOH . I 4 HOH A 136 536 74 HOH HOH . I 4 HOH A 137 537 175 HOH HOH . I 4 HOH A 138 538 219 HOH HOH . I 4 HOH A 139 539 334 HOH HOH . I 4 HOH A 140 540 100 HOH HOH . I 4 HOH A 141 541 239 HOH HOH . I 4 HOH A 142 542 252 HOH HOH . I 4 HOH A 143 543 139 HOH HOH . I 4 HOH A 144 544 192 HOH HOH . I 4 HOH A 145 545 250 HOH HOH . I 4 HOH A 146 546 281 HOH HOH . I 4 HOH A 147 547 262 HOH HOH . I 4 HOH A 148 548 322 HOH HOH . I 4 HOH A 149 549 110 HOH HOH . I 4 HOH A 150 550 308 HOH HOH . I 4 HOH A 151 551 69 HOH HOH . I 4 HOH A 152 552 288 HOH HOH . I 4 HOH A 153 553 312 HOH HOH . I 4 HOH A 154 554 234 HOH HOH . I 4 HOH A 155 555 268 HOH HOH . I 4 HOH A 156 556 204 HOH HOH . I 4 HOH A 157 557 83 HOH HOH . I 4 HOH A 158 558 171 HOH HOH . I 4 HOH A 159 559 287 HOH HOH . I 4 HOH A 160 560 318 HOH HOH . I 4 HOH A 161 561 269 HOH HOH . I 4 HOH A 162 562 290 HOH HOH . I 4 HOH A 163 563 218 HOH HOH . I 4 HOH A 164 564 309 HOH HOH . I 4 HOH A 165 565 193 HOH HOH . I 4 HOH A 166 566 263 HOH HOH . I 4 HOH A 167 567 202 HOH HOH . I 4 HOH A 168 568 319 HOH HOH . I 4 HOH A 169 569 324 HOH HOH . I 4 HOH A 170 570 238 HOH HOH . I 4 HOH A 171 571 163 HOH HOH . I 4 HOH A 172 572 232 HOH HOH . I 4 HOH A 173 573 117 HOH HOH . I 4 HOH A 174 574 241 HOH HOH . I 4 HOH A 175 575 198 HOH HOH . I 4 HOH A 176 576 289 HOH HOH . I 4 HOH A 177 577 272 HOH HOH . J 4 HOH B 1 401 150 HOH HOH . J 4 HOH B 2 402 131 HOH HOH . J 4 HOH B 3 403 341 HOH HOH . J 4 HOH B 4 404 120 HOH HOH . J 4 HOH B 5 405 8 HOH HOH . J 4 HOH B 6 406 119 HOH HOH . J 4 HOH B 7 407 90 HOH HOH . J 4 HOH B 8 408 82 HOH HOH . J 4 HOH B 9 409 292 HOH HOH . J 4 HOH B 10 410 297 HOH HOH . J 4 HOH B 11 411 344 HOH HOH . J 4 HOH B 12 412 174 HOH HOH . J 4 HOH B 13 413 277 HOH HOH . J 4 HOH B 14 414 96 HOH HOH . J 4 HOH B 15 415 244 HOH HOH . J 4 HOH B 16 416 19 HOH HOH . J 4 HOH B 17 417 2 HOH HOH . J 4 HOH B 18 418 196 HOH HOH . J 4 HOH B 19 419 273 HOH HOH . J 4 HOH B 20 420 327 HOH HOH . J 4 HOH B 21 421 34 HOH HOH . J 4 HOH B 22 422 121 HOH HOH . J 4 HOH B 23 423 118 HOH HOH . J 4 HOH B 24 424 245 HOH HOH . J 4 HOH B 25 425 246 HOH HOH . J 4 HOH B 26 426 231 HOH HOH . J 4 HOH B 27 427 337 HOH HOH . J 4 HOH B 28 428 48 HOH HOH . J 4 HOH B 29 429 162 HOH HOH . J 4 HOH B 30 430 157 HOH HOH . J 4 HOH B 31 431 313 HOH HOH . J 4 HOH B 32 432 169 HOH HOH . J 4 HOH B 33 433 343 HOH HOH . J 4 HOH B 34 434 140 HOH HOH . J 4 HOH B 35 435 78 HOH HOH . J 4 HOH B 36 436 7 HOH HOH . J 4 HOH B 37 437 251 HOH HOH . J 4 HOH B 38 438 30 HOH HOH . J 4 HOH B 39 439 235 HOH HOH . J 4 HOH B 40 440 195 HOH HOH . J 4 HOH B 41 441 16 HOH HOH . J 4 HOH B 42 442 51 HOH HOH . J 4 HOH B 43 443 10 HOH HOH . J 4 HOH B 44 444 222 HOH HOH . J 4 HOH B 45 445 260 HOH HOH . J 4 HOH B 46 446 226 HOH HOH . J 4 HOH B 47 447 335 HOH HOH . J 4 HOH B 48 448 116 HOH HOH . J 4 HOH B 49 449 64 HOH HOH . J 4 HOH B 50 450 230 HOH HOH . J 4 HOH B 51 451 127 HOH HOH . J 4 HOH B 52 452 128 HOH HOH . J 4 HOH B 53 453 59 HOH HOH . J 4 HOH B 54 454 249 HOH HOH . J 4 HOH B 55 455 283 HOH HOH . J 4 HOH B 56 456 47 HOH HOH . J 4 HOH B 57 457 26 HOH HOH . J 4 HOH B 58 458 42 HOH HOH . J 4 HOH B 59 459 124 HOH HOH . J 4 HOH B 60 460 206 HOH HOH . J 4 HOH B 61 461 229 HOH HOH . J 4 HOH B 62 462 54 HOH HOH . J 4 HOH B 63 463 253 HOH HOH . J 4 HOH B 64 464 314 HOH HOH . J 4 HOH B 65 465 49 HOH HOH . J 4 HOH B 66 466 276 HOH HOH . J 4 HOH B 67 467 84 HOH HOH . J 4 HOH B 68 468 223 HOH HOH . J 4 HOH B 69 469 247 HOH HOH . J 4 HOH B 70 470 328 HOH HOH . J 4 HOH B 71 471 323 HOH HOH . J 4 HOH B 72 472 3 HOH HOH . J 4 HOH B 73 473 256 HOH HOH . J 4 HOH B 74 474 274 HOH HOH . J 4 HOH B 75 475 28 HOH HOH . J 4 HOH B 76 476 316 HOH HOH . J 4 HOH B 77 477 147 HOH HOH . J 4 HOH B 78 478 185 HOH HOH . J 4 HOH B 79 479 278 HOH HOH . J 4 HOH B 80 480 332 HOH HOH . J 4 HOH B 81 481 151 HOH HOH . J 4 HOH B 82 482 301 HOH HOH . J 4 HOH B 83 483 216 HOH HOH . J 4 HOH B 84 484 136 HOH HOH . J 4 HOH B 85 485 329 HOH HOH . J 4 HOH B 86 486 142 HOH HOH . J 4 HOH B 87 487 302 HOH HOH . J 4 HOH B 88 488 17 HOH HOH . J 4 HOH B 89 489 265 HOH HOH . J 4 HOH B 90 490 298 HOH HOH . J 4 HOH B 91 491 320 HOH HOH . J 4 HOH B 92 492 224 HOH HOH . J 4 HOH B 93 493 200 HOH HOH . J 4 HOH B 94 494 52 HOH HOH . J 4 HOH B 95 495 172 HOH HOH . J 4 HOH B 96 496 186 HOH HOH . J 4 HOH B 97 497 233 HOH HOH . J 4 HOH B 98 498 215 HOH HOH . J 4 HOH B 99 499 98 HOH HOH . J 4 HOH B 100 500 114 HOH HOH . J 4 HOH B 101 501 275 HOH HOH . J 4 HOH B 102 502 104 HOH HOH . J 4 HOH B 103 503 18 HOH HOH . J 4 HOH B 104 504 317 HOH HOH . J 4 HOH B 105 505 132 HOH HOH . J 4 HOH B 106 506 225 HOH HOH . J 4 HOH B 107 507 115 HOH HOH . J 4 HOH B 108 508 227 HOH HOH . J 4 HOH B 109 509 108 HOH HOH . J 4 HOH B 110 510 53 HOH HOH . J 4 HOH B 111 511 336 HOH HOH . J 4 HOH B 112 512 152 HOH HOH . J 4 HOH B 113 513 168 HOH HOH . J 4 HOH B 114 514 1 HOH HOH . J 4 HOH B 115 515 105 HOH HOH . J 4 HOH B 116 516 79 HOH HOH . J 4 HOH B 117 517 291 HOH HOH . J 4 HOH B 118 518 183 HOH HOH . J 4 HOH B 119 519 25 HOH HOH . J 4 HOH B 120 520 205 HOH HOH . J 4 HOH B 121 521 145 HOH HOH . J 4 HOH B 122 522 149 HOH HOH . J 4 HOH B 123 523 32 HOH HOH . J 4 HOH B 124 524 158 HOH HOH . J 4 HOH B 125 525 254 HOH HOH . J 4 HOH B 126 526 43 HOH HOH . J 4 HOH B 127 527 70 HOH HOH . J 4 HOH B 128 528 209 HOH HOH . J 4 HOH B 129 529 39 HOH HOH . J 4 HOH B 130 530 190 HOH HOH . J 4 HOH B 131 531 5 HOH HOH . J 4 HOH B 132 532 146 HOH HOH . J 4 HOH B 133 533 85 HOH HOH . J 4 HOH B 134 534 76 HOH HOH . J 4 HOH B 135 535 333 HOH HOH . J 4 HOH B 136 536 266 HOH HOH . J 4 HOH B 137 537 259 HOH HOH . J 4 HOH B 138 538 88 HOH HOH . J 4 HOH B 139 539 307 HOH HOH . J 4 HOH B 140 540 286 HOH HOH . J 4 HOH B 141 541 111 HOH HOH . J 4 HOH B 142 542 178 HOH HOH . J 4 HOH B 143 543 130 HOH HOH . J 4 HOH B 144 544 141 HOH HOH . J 4 HOH B 145 545 220 HOH HOH . J 4 HOH B 146 546 296 HOH HOH . J 4 HOH B 147 547 203 HOH HOH . J 4 HOH B 148 548 167 HOH HOH . J 4 HOH B 149 549 68 HOH HOH . J 4 HOH B 150 550 237 HOH HOH . J 4 HOH B 151 551 255 HOH HOH . J 4 HOH B 152 552 188 HOH HOH . J 4 HOH B 153 553 326 HOH HOH . J 4 HOH B 154 554 305 HOH HOH . J 4 HOH B 155 555 208 HOH HOH . J 4 HOH B 156 556 228 HOH HOH . J 4 HOH B 157 557 199 HOH HOH . J 4 HOH B 158 558 279 HOH HOH . J 4 HOH B 159 559 189 HOH HOH . J 4 HOH B 160 560 331 HOH HOH . J 4 HOH B 161 561 181 HOH HOH . J 4 HOH B 162 562 236 HOH HOH . J 4 HOH B 163 563 214 HOH HOH . J 4 HOH B 164 564 270 HOH HOH . J 4 HOH B 165 565 271 HOH HOH . J 4 HOH B 166 566 267 HOH HOH . J 4 HOH B 167 567 325 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . A . F 2 -13.316 10.283 -8.578 0.5 65.48 ? PB GDP 301 B 1 HETATM 2 P PB GDP . B . F 2 -14.251 12.672 -7.743 0.5 62.8 ? PB GDP 301 B 1 HETATM 3 O O1B GDP . A . F 2 -13.483 11.728 -8.178 0.5 65.79 ? O1B GDP 301 B 1 HETATM 4 O O1B GDP . B . F 2 -14.362 14.089 -7.233 0.5 62.55 ? O1B GDP 301 B 1 HETATM 5 O O2B GDP . A . F 2 -11.869 10.048 -8.925 0.5 65.49 ? O2B GDP 301 B 1 HETATM 6 O O2B GDP . B . F 2 -12.857 12.463 -8.279 0.5 63.8 ? O2B GDP 301 B 1 HETATM 7 O O3B GDP . A . F 2 -13.694 9.375 -7.434 0.5 65.42 ? O3B GDP 301 B 1 HETATM 8 O O3B GDP . B . F 2 -14.544 11.716 -6.612 0.5 63.46 ? O3B GDP 301 B 1 HETATM 9 O O3A GDP . A . F 2 -14.261 9.996 -9.851 0.5 65.43 ? O3A GDP 301 B 1 HETATM 10 O O3A GDP . B . F 2 -15.297 12.446 -8.945 0.5 63.9 ? O3A GDP 301 B 1 HETATM 11 P PA GDP . A . F 2 -15.841 10.311 -9.802 0.5 65.32 ? PA GDP 301 B 1 HETATM 12 P PA GDP . B . F 2 -16.044 11.039 -9.195 0.5 64.98 ? PA GDP 301 B 1 HETATM 13 O O1A GDP . A . F 2 -16.586 9.473 -10.814 0.5 65.33 ? O1A GDP 301 B 1 HETATM 14 O O1A GDP . B . F 2 -16.184 10.766 -10.674 0.5 65.79 ? O1A GDP 301 B 1 HETATM 15 O O2A GDP . A . F 2 -16.427 10.111 -8.43 0.5 65.46 ? O2A GDP 301 B 1 HETATM 16 O O2A GDP . B . F 2 -15.327 9.889 -8.54 0.5 65.82 ? O2A GDP 301 B 1 HETATM 17 O O5' GDP . A . F 2 -15.922 11.868 -10.195 0.5 64.95 ? O5' GDP 301 B 1 HETATM 18 O O5' GDP . B . F 2 -17.485 11.303 -8.531 0.5 63.83 ? O5' GDP 301 B 1 HETATM 19 C C5' GDP . A . F 2 -16.449 12.792 -9.243 0.5 64 ? C5' GDP 301 B 1 HETATM 20 C C5' GDP . B . F 2 -18.646 11.336 -9.351 0.5 61.76 ? C5' GDP 301 B 1 HETATM 21 C C4' GDP . A . F 2 -17.639 13.503 -9.861 0.5 62.84 ? C4' GDP 301 B 1 HETATM 22 C C4' GDP . B . F 2 -18.771 12.772 -9.842 0.5 59.68 ? C4' GDP 301 B 1 HETATM 23 O O4' GDP . A . F 2 -17.305 13.887 -11.194 0.5 61.59 ? O4' GDP 301 B 1 HETATM 24 O O4' GDP . B . F 2 -17.873 12.967 -10.938 0.5 57.83 ? O4' GDP 301 B 1 HETATM 25 C C3' GDP . A . F 2 -18.84 12.571 -9.933 0.5 62.68 ? C3' GDP 301 B 1 HETATM 26 C C3' GDP . B . F 2 -20.167 13.106 -10.332 0.5 58.77 ? C3' GDP 301 B 1 HETATM 27 O O3' GDP . A . F 2 -19.902 13.068 -9.112 0.5 63.06 ? O3' GDP 301 B 1 HETATM 28 O O3' GDP . B . F 2 -20.541 14.381 -9.814 0.5 59.36 ? O3' GDP 301 B 1 HETATM 29 C C2' GDP . A . F 2 -19.267 12.55 -11.386 0.5 61.68 ? C2' GDP 301 B 1 HETATM 30 C C2' GDP . B . F 2 -20.058 13.242 -11.829 0.5 57.26 ? C2' GDP 301 B 1 HETATM 31 O O2' GDP . A . F 2 -20.642 12.929 -11.507 0.5 61.89 ? O2' GDP 301 B 1 HETATM 32 O O2' GDP . B . F 2 -20.829 14.361 -12.276 0.5 57.34 ? O2' GDP 301 B 1 HETATM 33 C C1' GDP . A . F 2 -18.378 13.569 -12.082 0.5 60.24 ? C1' GDP 301 B 1 HETATM 34 C C1' GDP . B . F 2 -18.58 13.497 -12.061 0.5 55.28 ? C1' GDP 301 B 1 HETATM 35 N N9 GDP . A . F 2 -17.853 13.02 -13.355 0.5 57.04 ? N9 GDP 301 B 1 HETATM 36 N N9 GDP . B . F 2 -18.083 12.89 -13.322 0.5 50.36 ? N9 GDP 301 B 1 HETATM 37 C C8 GDP . A . F 2 -16.595 12.601 -13.594 0.5 55.7 ? C8 GDP 301 B 1 HETATM 38 C C8 GDP . B . F 2 -16.917 12.231 -13.462 0.5 48.29 ? C8 GDP 301 B 1 HETATM 39 N N7 GDP . A . F 2 -16.463 12.161 -14.872 0.5 54.74 ? N7 GDP 301 B 1 HETATM 40 N N7 GDP . B . F 2 -16.749 11.809 -14.739 0.5 46.76 ? N7 GDP 301 B 1 HETATM 41 C C5 GDP . A . F 2 -17.662 12.295 -15.469 0.5 53.79 ? C5 GDP 301 B 1 HETATM 42 C C5 GDP . B . F 2 -17.831 12.191 -15.437 0.5 45.71 ? C5 GDP 301 B 1 HETATM 43 C C6 GDP . A . F 2 -18.23 12.023 -16.806 0.5 51.88 ? C6 GDP 301 B 1 HETATM 44 C C6 GDP . B . F 2 -18.297 12.063 -16.832 0.5 42.92 ? C6 GDP 301 B 1 HETATM 45 O O6 GDP . A . F 2 -17.536 11.542 -17.726 0.5 50.31 ? O6 GDP 301 B 1 HETATM 46 O O6 GDP . B . F 2 -17.617 11.475 -17.696 0.5 39.1 ? O6 GDP 301 B 1 HETATM 47 N N1 GDP . A . F 2 -19.52 12.312 -16.997 0.5 51.79 ? N1 GDP 301 B 1 HETATM 48 N N1 GDP . B . F 2 -19.473 12.604 -17.144 0.5 42.6 ? N1 GDP 301 B 1 HETATM 49 C C2 GDP . A . F 2 -20.313 12.829 -16.043 0.5 52.03 ? C2 GDP 301 B 1 HETATM 50 C C2 GDP . B . F 2 -20.249 13.246 -16.255 0.5 44.04 ? C2 GDP 301 B 1 HETATM 51 N N2 GDP . A . F 2 -21.61 13.084 -16.339 0.5 51.51 ? N2 GDP 301 B 1 HETATM 52 N N2 GDP . B . F 2 -21.429 13.756 -16.678 0.5 44.67 ? N2 GDP 301 B 1 HETATM 53 N N3 GDP . A . F 2 -19.862 13.104 -14.797 0.5 53.06 ? N3 GDP 301 B 1 HETATM 54 N N3 GDP . B . F 2 -19.885 13.403 -14.962 0.5 44.95 ? N3 GDP 301 B 1 HETATM 55 C C4 GDP . A . F 2 -18.573 12.861 -14.463 0.5 54.69 ? C4 GDP 301 B 1 HETATM 56 C C4 GDP . B . F 2 -18.711 12.906 -14.501 0.5 47.14 ? C4 GDP 301 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 56 #