data_9DWD
#
_model_server_result.job_id            SND379adDdRUjvm5PYvcuw 
_model_server_result.datetime_utc      '2024-11-28 07:54:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9dwd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":401}' 
#
_entry.id    9DWD 
#
_exptl.entry_id    9DWD 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              660.035 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'INOSITOL HEXAKISPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9DWD 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9DWD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             Y 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H18 O24 P6' 
_chem_comp.formula_weight    660.035 
_chem_comp.id                IHP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'INOSITOL HEXAKISPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 IHP sing 150 n n 
C1 C6 IHP sing 151 n n 
C1 O11 IHP sing 152 n n 
C1 H1 IHP sing 153 n n 
C2 C3 IHP sing 154 n n 
C2 O12 IHP sing 155 n n 
C2 H2 IHP sing 156 n n 
C3 C4 IHP sing 157 n n 
C3 O13 IHP sing 158 n n 
C3 H3 IHP sing 159 n n 
C4 C5 IHP sing 160 n n 
C4 O14 IHP sing 161 n n 
C4 H4 IHP sing 162 n n 
C5 C6 IHP sing 163 n n 
C5 O15 IHP sing 164 n n 
C5 H5 IHP sing 165 n n 
C6 O16 IHP sing 166 n n 
C6 H6 IHP sing 167 n n 
O11 P1 IHP sing 168 n n 
P1 O21 IHP doub 169 n n 
P1 O31 IHP sing 170 n n 
P1 O41 IHP sing 171 n n 
O31 H31 IHP sing 172 n n 
O41 H41 IHP sing 173 n n 
O12 P2 IHP sing 174 n n 
P2 O22 IHP doub 175 n n 
P2 O32 IHP sing 176 n n 
P2 O42 IHP sing 177 n n 
O32 H32 IHP sing 178 n n 
O42 H42 IHP sing 179 n n 
O13 P3 IHP sing 180 n n 
P3 O23 IHP doub 181 n n 
P3 O33 IHP sing 182 n n 
P3 O43 IHP sing 183 n n 
O33 H33 IHP sing 184 n n 
O43 H43 IHP sing 185 n n 
O14 P4 IHP sing 186 n n 
P4 O24 IHP doub 187 n n 
P4 O34 IHP sing 188 n n 
P4 O44 IHP sing 189 n n 
O34 H34 IHP sing 190 n n 
O44 H44 IHP sing 191 n n 
O15 P5 IHP sing 192 n n 
P5 O25 IHP doub 193 n n 
P5 O35 IHP sing 194 n n 
P5 O45 IHP sing 195 n n 
O35 H35 IHP sing 196 n n 
O45 H45 IHP sing 197 n n 
O16 P6 IHP sing 198 n n 
P6 O26 IHP doub 199 n n 
P6 O36 IHP sing 200 n n 
P6 O46 IHP sing 201 n n 
O36 H36 IHP sing 202 n n 
O46 H46 IHP sing 203 n n 
#
_atom_sites.entry_id                     9DWD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 2 QNG A 1 301 402 QNG QNG . 
T 2 QNG B 1 301 402 QNG QNG . 
U 2 QNG C 1 301 402 QNG QNG . 
V 2 QNG D 1 301 402 QNG QNG . 
W 2 QNG E 1 301 402 QNG QNG . 
X 2 QNG F 1 301 402 QNG QNG . 
Y 3 IHP G 1 401 401 IHP IHP . 
Z 2 QNG G 1 402 402 QNG QNG . 
AA 2 QNG H 1 301 402 QNG QNG . 
BA 2 QNG I 1 301 402 QNG QNG . 
CA 2 QNG J 1 301 402 QNG QNG . 
DA 2 QNG K 1 301 402 QNG QNG . 
EA 2 QNG L 1 301 402 QNG QNG . 
FA 2 QNG M 1 301 402 QNG QNG . 
GA 2 QNG N 1 301 402 QNG QNG . 
HA 2 QNG O 1 301 402 QNG QNG . 
IA 2 QNG P 1 301 402 QNG QNG . 
JA 2 QNG Q 1 301 402 QNG QNG . 
KA 2 QNG R 1 301 402 QNG QNG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IHP . . . Y 3 149.938 149.342 152.14 1 177.93 ? C1 IHP 401 G 1 
HETATM 2 C C2 IHP . . . Y 3 148.754 150.338 152.304 1 177.72 ? C2 IHP 401 G 1 
HETATM 3 C C3 IHP . . . Y 3 147.397 149.781 152.757 1 177.56 ? C3 IHP 401 G 1 
HETATM 4 C C4 IHP . . . Y 3 147.592 148.342 153.309 1 177.76 ? C4 IHP 401 G 1 
HETATM 5 C C5 IHP . . . Y 3 148.231 147.377 152.308 1 177.25 ? C5 IHP 401 G 1 
HETATM 6 C C6 IHP . . . Y 3 149.477 147.94 151.619 1 176.4 ? C6 IHP 401 G 1 
HETATM 7 O O11 IHP . . . Y 3 150.687 149.205 153.271 1 179.36 ? O11 IHP 401 G 1 
HETATM 8 P P1 IHP . . . Y 3 152.247 148.71 153.272 1 177.09 ? P1 IHP 401 G 1 
HETATM 9 O O21 IHP . . . Y 3 152.318 147.209 153.549 1 175.57 ? O21 IHP 401 G 1 
HETATM 10 O O31 IHP . . . Y 3 153.082 149.456 154.347 1 176.13 ? O31 IHP 401 G 1 
HETATM 11 O O41 IHP . . . Y 3 152.927 149.026 151.927 1 174.47 ? O41 IHP 401 G 1 
HETATM 12 O O12 IHP . . . Y 3 149.101 151.389 153.16 1 177.91 ? O12 IHP 401 G 1 
HETATM 13 P P2 IHP . . . Y 3 150.329 152.397 152.744 1 176.34 ? P2 IHP 401 G 1 
HETATM 14 O O22 IHP . . . Y 3 150.246 152.809 151.283 1 173.94 ? O22 IHP 401 G 1 
HETATM 15 O O32 IHP . . . Y 3 151.7 151.819 153.087 1 177.14 ? O32 IHP 401 G 1 
HETATM 16 O O42 IHP . . . Y 3 150.111 153.673 153.617 1 177.45 ? O42 IHP 401 G 1 
HETATM 17 O O13 IHP . . . Y 3 146.709 150.627 153.561 1 178.9 ? O13 IHP 401 G 1 
HETATM 18 P P3 IHP . . . Y 3 145.951 151.97 152.996 1 179.48 ? P3 IHP 401 G 1 
HETATM 19 O O23 IHP . . . Y 3 144.764 152.379 153.884 1 179.04 ? O23 IHP 401 G 1 
HETATM 20 O O33 IHP . . . Y 3 146.906 153.174 152.911 1 178.61 ? O33 IHP 401 G 1 
HETATM 21 O O43 IHP . . . Y 3 145.423 151.676 151.576 1 177.01 ? O43 IHP 401 G 1 
HETATM 22 O O14 IHP . . . Y 3 146.369 147.813 153.732 1 178.86 ? O14 IHP 401 G 1 
HETATM 23 P P4 IHP . . . Y 3 144.966 147.941 152.893 1 177.38 ? P4 IHP 401 G 1 
HETATM 24 O O24 IHP . . . Y 3 144.266 149.22 153.325 1 177.46 ? O24 IHP 401 G 1 
HETATM 25 O O34 IHP . . . Y 3 145.193 147.881 151.369 1 177.3 ? O34 IHP 401 G 1 
HETATM 26 O O44 IHP . . . Y 3 144.007 146.759 153.198 1 178.1 ? O44 IHP 401 G 1 
HETATM 27 O O15 IHP . . . Y 3 148.568 146.173 152.89 1 177.16 ? O15 IHP 401 G 1 
HETATM 28 P P5 IHP . . . Y 3 147.541 144.921 153.075 1 179.37 ? P5 IHP 401 G 1 
HETATM 29 O O25 IHP . . . Y 3 148.276 143.589 153.134 1 178.49 ? O25 IHP 401 G 1 
HETATM 30 O O35 IHP . . . Y 3 146.591 144.963 151.862 1 177.24 ? O35 IHP 401 G 1 
HETATM 31 O O45 IHP . . . Y 3 146.646 145.051 154.333 1 179.9 ? O45 IHP 401 G 1 
HETATM 32 O O16 IHP . . . Y 3 149.355 147.847 150.211 1 177.53 ? O16 IHP 401 G 1 
HETATM 33 P P6 IHP . . . Y 3 148.617 148.889 149.196 1 177.3 ? P6 IHP 401 G 1 
HETATM 34 O O26 IHP . . . Y 3 149.297 150.248 149.144 1 177.56 ? O26 IHP 401 G 1 
HETATM 35 O O36 IHP . . . Y 3 148.582 148.301 147.764 1 178.09 ? O36 IHP 401 G 1 
HETATM 36 O O46 IHP . . . Y 3 147.156 149.071 149.661 1 177.34 ? O46 IHP 401 G 1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           36 
#