data_9DZC
#
_model_server_result.job_id            gWzlicrGS2RfictAt1hPUA 
_model_server_result.datetime_utc      '2025-02-27 10:01:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9dzc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":405}' 
#
_entry.id    9DZC 
#
_exptl.entry_id    9DZC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9DZC 
_cell.length_a            79.237 
_cell.length_b            92.828 
_cell.length_c            118.205 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9DZC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 100 A CYS 100 1_555 A SG CYS 144 A CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 A SG CYS 172 A CYS 172 1_555 A SG CYS 176 A CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 B SG CYS 100 B CYS 100 1_555 B SG CYS 144 B CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 B SG CYS 172 B CYS 172 1_555 B SG CYS 176 B CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     9DZC 
_atom_sites.fract_transf_matrix[1][1]    0.01262 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010773 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00846 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MPD A 1 401 401 MPD MPD . 
D 3 GOL A 1 402 403 GOL GOL . 
E 3 GOL A 1 403 404 GOL GOL . 
F 2 MPD A 1 404 405 MPD MPD . 
G 4 EPE A 1 405 406 EPE EPE . 
H 3 GOL A 1 406 407 GOL GOL . 
I 5 PEG B 1 401 401 PEG PEG . 
J 3 GOL B 1 402 402 GOL GOL . 
K 6 HOH A 1 501 171 HOH HOH . 
K 6 HOH A 2 502 35 HOH HOH . 
K 6 HOH A 3 503 169 HOH HOH . 
K 6 HOH A 4 504 184 HOH HOH . 
K 6 HOH A 5 505 75 HOH HOH . 
K 6 HOH A 6 506 204 HOH HOH . 
K 6 HOH A 7 507 68 HOH HOH . 
K 6 HOH A 8 508 87 HOH HOH . 
K 6 HOH A 9 509 96 HOH HOH . 
K 6 HOH A 10 510 195 HOH HOH . 
K 6 HOH A 11 511 69 HOH HOH . 
K 6 HOH A 12 512 86 HOH HOH . 
K 6 HOH A 13 513 53 HOH HOH . 
K 6 HOH A 14 514 124 HOH HOH . 
K 6 HOH A 15 515 12 HOH HOH . 
K 6 HOH A 16 516 38 HOH HOH . 
K 6 HOH A 17 517 27 HOH HOH . 
K 6 HOH A 18 518 15 HOH HOH . 
K 6 HOH A 19 519 61 HOH HOH . 
K 6 HOH A 20 520 137 HOH HOH . 
K 6 HOH A 21 521 182 HOH HOH . 
K 6 HOH A 22 522 51 HOH HOH . 
K 6 HOH A 23 523 119 HOH HOH . 
K 6 HOH A 24 524 21 HOH HOH . 
K 6 HOH A 25 525 142 HOH HOH . 
K 6 HOH A 26 526 9 HOH HOH . 
K 6 HOH A 27 527 161 HOH HOH . 
K 6 HOH A 28 528 43 HOH HOH . 
K 6 HOH A 29 529 201 HOH HOH . 
K 6 HOH A 30 530 138 HOH HOH . 
K 6 HOH A 31 531 203 HOH HOH . 
K 6 HOH A 32 532 44 HOH HOH . 
K 6 HOH A 33 533 155 HOH HOH . 
K 6 HOH A 34 534 85 HOH HOH . 
K 6 HOH A 35 535 47 HOH HOH . 
K 6 HOH A 36 536 17 HOH HOH . 
K 6 HOH A 37 537 20 HOH HOH . 
K 6 HOH A 38 538 37 HOH HOH . 
K 6 HOH A 39 539 8 HOH HOH . 
K 6 HOH A 40 540 67 HOH HOH . 
K 6 HOH A 41 541 19 HOH HOH . 
K 6 HOH A 42 542 33 HOH HOH . 
K 6 HOH A 43 543 140 HOH HOH . 
K 6 HOH A 44 544 143 HOH HOH . 
K 6 HOH A 45 545 194 HOH HOH . 
K 6 HOH A 46 546 26 HOH HOH . 
K 6 HOH A 47 547 42 HOH HOH . 
K 6 HOH A 48 548 144 HOH HOH . 
K 6 HOH A 49 549 63 HOH HOH . 
K 6 HOH A 50 550 190 HOH HOH . 
K 6 HOH A 51 551 154 HOH HOH . 
K 6 HOH A 52 552 153 HOH HOH . 
K 6 HOH A 53 553 74 HOH HOH . 
K 6 HOH A 54 554 165 HOH HOH . 
K 6 HOH A 55 555 14 HOH HOH . 
K 6 HOH A 56 556 49 HOH HOH . 
K 6 HOH A 57 557 57 HOH HOH . 
K 6 HOH A 58 558 146 HOH HOH . 
K 6 HOH A 59 559 189 HOH HOH . 
K 6 HOH A 60 560 45 HOH HOH . 
K 6 HOH A 61 561 145 HOH HOH . 
K 6 HOH A 62 562 176 HOH HOH . 
K 6 HOH A 63 563 149 HOH HOH . 
K 6 HOH A 64 564 179 HOH HOH . 
K 6 HOH A 65 565 126 HOH HOH . 
K 6 HOH A 66 566 54 HOH HOH . 
K 6 HOH A 67 567 148 HOH HOH . 
K 6 HOH A 68 568 202 HOH HOH . 
K 6 HOH A 69 569 40 HOH HOH . 
K 6 HOH A 70 570 208 HOH HOH . 
K 6 HOH A 71 571 191 HOH HOH . 
K 6 HOH A 72 572 205 HOH HOH . 
K 6 HOH A 73 573 156 HOH HOH . 
K 6 HOH A 74 574 164 HOH HOH . 
K 6 HOH A 75 575 125 HOH HOH . 
K 6 HOH A 76 576 10 HOH HOH . 
K 6 HOH A 77 577 104 HOH HOH . 
K 6 HOH A 78 578 56 HOH HOH . 
K 6 HOH A 79 579 39 HOH HOH . 
K 6 HOH A 80 580 90 HOH HOH . 
K 6 HOH A 81 581 193 HOH HOH . 
K 6 HOH A 82 582 159 HOH HOH . 
K 6 HOH A 83 583 16 HOH HOH . 
K 6 HOH A 84 584 196 HOH HOH . 
K 6 HOH A 85 585 198 HOH HOH . 
K 6 HOH A 86 586 213 HOH HOH . 
K 6 HOH A 87 587 60 HOH HOH . 
K 6 HOH A 88 588 76 HOH HOH . 
K 6 HOH A 89 589 186 HOH HOH . 
K 6 HOH A 90 590 180 HOH HOH . 
K 6 HOH A 91 591 183 HOH HOH . 
K 6 HOH A 92 592 192 HOH HOH . 
K 6 HOH A 93 593 181 HOH HOH . 
K 6 HOH A 94 594 188 HOH HOH . 
K 6 HOH A 95 595 197 HOH HOH . 
K 6 HOH A 96 596 128 HOH HOH . 
K 6 HOH A 97 597 129 HOH HOH . 
K 6 HOH A 98 598 127 HOH HOH . 
K 6 HOH A 99 599 59 HOH HOH . 
L 6 HOH B 1 501 84 HOH HOH . 
L 6 HOH B 2 502 168 HOH HOH . 
L 6 HOH B 3 503 199 HOH HOH . 
L 6 HOH B 4 504 115 HOH HOH . 
L 6 HOH B 5 505 46 HOH HOH . 
L 6 HOH B 6 506 94 HOH HOH . 
L 6 HOH B 7 507 106 HOH HOH . 
L 6 HOH B 8 508 34 HOH HOH . 
L 6 HOH B 9 509 28 HOH HOH . 
L 6 HOH B 10 510 25 HOH HOH . 
L 6 HOH B 11 511 105 HOH HOH . 
L 6 HOH B 12 512 91 HOH HOH . 
L 6 HOH B 13 513 157 HOH HOH . 
L 6 HOH B 14 514 30 HOH HOH . 
L 6 HOH B 15 515 18 HOH HOH . 
L 6 HOH B 16 516 207 HOH HOH . 
L 6 HOH B 17 517 163 HOH HOH . 
L 6 HOH B 18 518 3 HOH HOH . 
L 6 HOH B 19 519 178 HOH HOH . 
L 6 HOH B 20 520 11 HOH HOH . 
L 6 HOH B 21 521 82 HOH HOH . 
L 6 HOH B 22 522 132 HOH HOH . 
L 6 HOH B 23 523 99 HOH HOH . 
L 6 HOH B 24 524 48 HOH HOH . 
L 6 HOH B 25 525 36 HOH HOH . 
L 6 HOH B 26 526 92 HOH HOH . 
L 6 HOH B 27 527 152 HOH HOH . 
L 6 HOH B 28 528 110 HOH HOH . 
L 6 HOH B 29 529 139 HOH HOH . 
L 6 HOH B 30 530 83 HOH HOH . 
L 6 HOH B 31 531 77 HOH HOH . 
L 6 HOH B 32 532 133 HOH HOH . 
L 6 HOH B 33 533 109 HOH HOH . 
L 6 HOH B 34 534 141 HOH HOH . 
L 6 HOH B 35 535 172 HOH HOH . 
L 6 HOH B 36 536 118 HOH HOH . 
L 6 HOH B 37 537 52 HOH HOH . 
L 6 HOH B 38 538 111 HOH HOH . 
L 6 HOH B 39 539 151 HOH HOH . 
L 6 HOH B 40 540 93 HOH HOH . 
L 6 HOH B 41 541 209 HOH HOH . 
L 6 HOH B 42 542 31 HOH HOH . 
L 6 HOH B 43 543 114 HOH HOH . 
L 6 HOH B 44 544 160 HOH HOH . 
L 6 HOH B 45 545 50 HOH HOH . 
L 6 HOH B 46 546 211 HOH HOH . 
L 6 HOH B 47 547 41 HOH HOH . 
L 6 HOH B 48 548 212 HOH HOH . 
L 6 HOH B 49 549 32 HOH HOH . 
L 6 HOH B 50 550 200 HOH HOH . 
L 6 HOH B 51 551 13 HOH HOH . 
L 6 HOH B 52 552 29 HOH HOH . 
L 6 HOH B 53 553 113 HOH HOH . 
L 6 HOH B 54 554 24 HOH HOH . 
L 6 HOH B 55 555 78 HOH HOH . 
L 6 HOH B 56 556 98 HOH HOH . 
L 6 HOH B 57 557 81 HOH HOH . 
L 6 HOH B 58 558 210 HOH HOH . 
L 6 HOH B 59 559 55 HOH HOH . 
L 6 HOH B 60 560 79 HOH HOH . 
L 6 HOH B 61 561 206 HOH HOH . 
L 6 HOH B 62 562 117 HOH HOH . 
L 6 HOH B 63 563 173 HOH HOH . 
L 6 HOH B 64 564 58 HOH HOH . 
L 6 HOH B 65 565 80 HOH HOH . 
L 6 HOH B 66 566 102 HOH HOH . 
L 6 HOH B 67 567 162 HOH HOH . 
L 6 HOH B 68 568 101 HOH HOH . 
L 6 HOH B 69 569 97 HOH HOH . 
L 6 HOH B 70 570 100 HOH HOH . 
L 6 HOH B 71 571 134 HOH HOH . 
L 6 HOH B 72 572 167 HOH HOH . 
L 6 HOH B 73 573 112 HOH HOH . 
L 6 HOH B 74 574 177 HOH HOH . 
L 6 HOH B 75 575 185 HOH HOH . 
L 6 HOH B 76 576 158 HOH HOH . 
L 6 HOH B 77 577 130 HOH HOH . 
L 6 HOH B 78 578 131 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . G 4 7.7 13.382 10.503 1 77.94 ? N1 EPE 405 A 1 
HETATM 2 C C2 EPE . . . G 4 8.353 13.682 9.244 1 76.01 ? C2 EPE 405 A 1 
HETATM 3 C C3 EPE . . . G 4 8.629 12.404 8.471 1 82.87 ? C3 EPE 405 A 1 
HETATM 4 N N4 EPE . . . G 4 9.433 11.485 9.259 1 88.15 ? N4 EPE 405 A 1 
HETATM 5 C C5 EPE . . . G 4 8.774 11.2 10.517 1 75.7 ? C5 EPE 405 A 1 
HETATM 6 C C6 EPE . . . G 4 8.527 12.483 11.283 1 68.24 ? C6 EPE 405 A 1 
HETATM 7 C C7 EPE . . . G 4 9.753 10.255 8.558 1 86.53 ? C7 EPE 405 A 1 
HETATM 8 C C8 EPE . . . G 4 10.629 10.426 7.333 1 88.59 ? C8 EPE 405 A 1 
HETATM 9 O O8 EPE . . . G 4 10.77 9.187 6.676 1 97.17 ? O8 EPE 405 A 1 
HETATM 10 C C9 EPE . . . G 4 7.335 14.56 11.266 1 86.25 ? C9 EPE 405 A 1 
HETATM 11 C C10 EPE . . . G 4 6.069 15.222 10.74 1 80.98 ? C10 EPE 405 A 1 
HETATM 12 S S EPE . . . G 4 5.484 16.546 11.812 1 66.41 ? S EPE 405 A 1 
HETATM 13 O O1S EPE . . . G 4 5.101 15.899 13.08 1 65.27 ? O1S EPE 405 A 1 
HETATM 14 O O2S EPE . . . G 4 4.356 17.152 11.084 1 78.5 ? O2S EPE 405 A 1 
HETATM 15 O O3S EPE . . . G 4 6.641 17.467 11.969 1 68.74 ? O3S EPE 405 A 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           15 
#