data_9E62
#
_model_server_result.job_id            59zDYhrDBehIBnFeT8ub4Q 
_model_server_result.datetime_utc      '2025-09-03 22:12:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9e62 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":403}' 
#
_entry.id    9E62 
#
_exptl.entry_id    9E62 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              734.039 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHOSPHATIDYLETHANOLAMINE 
_entity.pdbx_number_of_molecules    35 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9E62 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9E62 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 CA N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
? 2 GA N N 
? 2 HA N N 
? 2 IA N N 
? 2 JA N N 
? 2 KA N N 
? 2 LA N N 
? 2 MA N N 
? 2 NA N N 
? 2 OA N N 
? 2 PA N N 
#
_chem_comp.formula           'C40 H80 N O8 P' 
_chem_comp.formula_weight    734.039 
_chem_comp.id                PTY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHOSPHATIDYLETHANOLAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O4 PTY sing 275 n n 
C1 C6 PTY sing 276 n n 
C1 HC11 PTY sing 277 n n 
C1 HC12 PTY sing 278 n n 
C2 C3 PTY sing 279 n n 
C2 N1 PTY sing 280 n n 
C2 HC21 PTY sing 281 n n 
C2 HC22 PTY sing 282 n n 
C3 O11 PTY sing 283 n n 
C3 HC31 PTY sing 284 n n 
C3 HC32 PTY sing 285 n n 
O4 C30 PTY sing 286 n n 
C5 C6 PTY sing 287 n n 
C5 O14 PTY sing 288 n n 
C5 HC51 PTY sing 289 n n 
C5 HC52 PTY sing 290 n n 
C6 O7 PTY sing 291 n n 
C6 HC6 PTY sing 292 n n 
O7 C8 PTY sing 293 n n 
C8 O10 PTY doub 294 n n 
C8 C11 PTY sing 295 n n 
C11 C12 PTY sing 296 n n 
C11 H111 PTY sing 297 n n 
C11 H112 PTY sing 298 n n 
C12 C13 PTY sing 299 n n 
C12 H121 PTY sing 300 n n 
C12 H122 PTY sing 301 n n 
C13 C14 PTY sing 302 n n 
C13 H131 PTY sing 303 n n 
C13 H132 PTY sing 304 n n 
C14 C15 PTY sing 305 n n 
C14 H141 PTY sing 306 n n 
C14 H142 PTY sing 307 n n 
C15 C16 PTY sing 308 n n 
C15 H151 PTY sing 309 n n 
C15 H152 PTY sing 310 n n 
C16 C17 PTY sing 311 n n 
C16 H161 PTY sing 312 n n 
C16 H162 PTY sing 313 n n 
C17 C18 PTY sing 314 n n 
C17 H171 PTY sing 315 n n 
C17 H172 PTY sing 316 n n 
C18 C19 PTY sing 317 n n 
C18 H181 PTY sing 318 n n 
C18 H182 PTY sing 319 n n 
C19 C20 PTY sing 320 n n 
C19 H191 PTY sing 321 n n 
C19 H192 PTY sing 322 n n 
C20 C21 PTY sing 323 n n 
C20 H201 PTY sing 324 n n 
C20 H202 PTY sing 325 n n 
C21 C22 PTY sing 326 n n 
C21 H211 PTY sing 327 n n 
C21 H212 PTY sing 328 n n 
C22 C23 PTY sing 329 n n 
C22 H221 PTY sing 330 n n 
C22 H222 PTY sing 331 n n 
C23 C24 PTY sing 332 n n 
C23 H231 PTY sing 333 n n 
C23 H232 PTY sing 334 n n 
C24 C25 PTY sing 335 n n 
C24 H241 PTY sing 336 n n 
C24 H242 PTY sing 337 n n 
C25 C26 PTY sing 338 n n 
C25 H251 PTY sing 339 n n 
C25 H252 PTY sing 340 n n 
C26 C27 PTY sing 341 n n 
C26 H261 PTY sing 342 n n 
C26 H262 PTY sing 343 n n 
C27 C28 PTY sing 344 n n 
C27 H271 PTY sing 345 n n 
C27 H272 PTY sing 346 n n 
C28 C29 PTY sing 347 n n 
C28 H281 PTY sing 348 n n 
C28 H282 PTY sing 349 n n 
C29 H291 PTY sing 350 n n 
C29 H292 PTY sing 351 n n 
C29 H293 PTY sing 352 n n 
C30 C31 PTY sing 353 n n 
C30 O30 PTY doub 354 n n 
C31 C32 PTY sing 355 n n 
C31 H311 PTY sing 356 n n 
C31 H312 PTY sing 357 n n 
C32 C33 PTY sing 358 n n 
C32 H321 PTY sing 359 n n 
C32 H322 PTY sing 360 n n 
C33 C34 PTY sing 361 n n 
C33 H331 PTY sing 362 n n 
C33 H332 PTY sing 363 n n 
C34 C35 PTY sing 364 n n 
C34 H341 PTY sing 365 n n 
C34 H342 PTY sing 366 n n 
C35 C36 PTY sing 367 n n 
C35 H351 PTY sing 368 n n 
C35 H352 PTY sing 369 n n 
C36 C37 PTY sing 370 n n 
C36 H361 PTY sing 371 n n 
C36 H362 PTY sing 372 n n 
C37 C38 PTY sing 373 n n 
C37 H371 PTY sing 374 n n 
C37 H372 PTY sing 375 n n 
C38 C39 PTY sing 376 n n 
C38 H381 PTY sing 377 n n 
C38 H382 PTY sing 378 n n 
C39 C40 PTY sing 379 n n 
C39 H391 PTY sing 380 n n 
C39 H392 PTY sing 381 n n 
C40 C41 PTY sing 382 n n 
C40 H401 PTY sing 383 n n 
C40 H402 PTY sing 384 n n 
C41 C42 PTY sing 385 n n 
C41 H411 PTY sing 386 n n 
C41 H412 PTY sing 387 n n 
C42 C43 PTY sing 388 n n 
C42 H421 PTY sing 389 n n 
C42 H422 PTY sing 390 n n 
C43 C44 PTY sing 391 n n 
C43 H431 PTY sing 392 n n 
C43 H432 PTY sing 393 n n 
C44 H441 PTY sing 394 n n 
C44 H442 PTY sing 395 n n 
C44 H443 PTY sing 396 n n 
P1 O11 PTY sing 397 n n 
P1 O12 PTY sing 398 n n 
P1 O13 PTY doub 399 n n 
P1 O14 PTY sing 400 n n 
O12 H12O PTY sing 401 n n 
N1 HN11 PTY sing 402 n n 
N1 HN12 PTY sing 403 n n 
#
_atom_sites.entry_id                     9E62 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 2 PTY A 1 401 401 PTY PEB . 
I 2 PTY A 1 402 403 PTY PED . 
J 2 PTY A 1 403 400 PTY PEA . 
K 2 PTY A 1 404 402 PTY PEC . 
L 2 PTY A 1 405 404 PTY PEE . 
M 2 PTY B 1 401 401 PTY PEB . 
N 2 PTY B 1 402 403 PTY PED . 
O 2 PTY B 1 403 400 PTY PEA . 
P 2 PTY B 1 404 402 PTY PEC . 
Q 2 PTY B 1 405 404 PTY PEE . 
R 2 PTY C 1 401 401 PTY PEB . 
S 2 PTY C 1 402 403 PTY PED . 
T 2 PTY C 1 403 400 PTY PEA . 
U 2 PTY C 1 404 402 PTY PEC . 
V 2 PTY C 1 405 404 PTY PEE . 
W 2 PTY D 1 401 401 PTY PEB . 
X 2 PTY D 1 402 403 PTY PED . 
Y 2 PTY D 1 403 400 PTY PEA . 
Z 2 PTY D 1 404 402 PTY PEC . 
AA 2 PTY D 1 405 404 PTY PEE . 
BA 2 PTY E 1 401 401 PTY PEB . 
CA 2 PTY E 1 402 403 PTY PED . 
DA 2 PTY E 1 403 400 PTY PEA . 
EA 2 PTY E 1 404 402 PTY PEC . 
FA 2 PTY E 1 405 404 PTY PEE . 
GA 2 PTY F 1 401 401 PTY PEB . 
HA 2 PTY F 1 402 403 PTY PED . 
IA 2 PTY F 1 403 400 PTY PEA . 
JA 2 PTY F 1 404 402 PTY PEC . 
KA 2 PTY F 1 405 404 PTY PEE . 
LA 2 PTY G 1 401 400 PTY PEA . 
MA 2 PTY G 1 402 402 PTY PEC . 
NA 2 PTY G 1 403 404 PTY PEE . 
OA 2 PTY G 1 404 401 PTY PEB . 
PA 2 PTY G 1 405 403 PTY PED . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PTY . . . J 2 164.104 128.944 160.328 1 137.68 ? C1 PTY 403 A 1 
HETATM 2 C C2 PTY . . . J 2 164.626 130.115 153.727 1 139.9 ? C2 PTY 403 A 1 
HETATM 3 C C3 PTY . . . J 2 164.468 129.076 154.834 1 139.88 ? C3 PTY 403 A 1 
HETATM 4 O O4 PTY . . . J 2 163.318 129.833 161.113 1 139.12 ? O4 PTY 403 A 1 
HETATM 5 C C5 PTY . . . J 2 166.297 128.707 159.184 1 143.83 ? C5 PTY 403 A 1 
HETATM 6 C C6 PTY . . . J 2 165.476 129.571 160.128 1 141.45 ? C6 PTY 403 A 1 
HETATM 7 O O7 PTY . . . J 2 166.124 129.656 161.393 1 146.08 ? O7 PTY 403 A 1 
HETATM 8 C C8 PTY . . . J 2 166.355 131.035 161.79 1 146.3 ? C8 PTY 403 A 1 
HETATM 9 O O10 PTY . . . J 2 167.501 131.417 161.955 1 146.09 ? O10 PTY 403 A 1 
HETATM 10 C C11 PTY . . . J 2 165.195 131.978 162 1 142.18 ? C11 PTY 403 A 1 
HETATM 11 C C12 PTY . . . J 2 165.748 133.353 162.351 1 140.56 ? C12 PTY 403 A 1 
HETATM 12 C C13 PTY . . . J 2 164.63 134.351 162.618 1 137.33 ? C13 PTY 403 A 1 
HETATM 13 C C14 PTY . . . J 2 164.975 135.698 161.997 1 136.62 ? C14 PTY 403 A 1 
HETATM 14 C C15 PTY . . . J 2 164.529 136.851 162.883 1 139.26 ? C15 PTY 403 A 1 
HETATM 15 C C16 PTY . . . J 2 164.972 138.178 162.283 1 140.91 ? C16 PTY 403 A 1 
HETATM 16 C C17 PTY . . . J 2 164.887 139.302 163.305 1 142.67 ? C17 PTY 403 A 1 
HETATM 17 C C18 PTY . . . J 2 165.457 140.598 162.735 1 142.19 ? C18 PTY 403 A 1 
HETATM 18 C C19 PTY . . . J 2 165.486 141.68 163.806 1 140.97 ? C19 PTY 403 A 1 
HETATM 19 C C20 PTY . . . J 2 164.101 141.851 164.414 1 140.09 ? C20 PTY 403 A 1 
HETATM 20 C C21 PTY . . . J 2 164.183 142.417 165.824 1 141.66 ? C21 PTY 403 A 1 
HETATM 21 C C22 PTY . . . J 2 162.831 142.3 166.515 1 140.93 ? C22 PTY 403 A 1 
HETATM 22 C C23 PTY . . . J 2 162.909 142.738 167.972 1 141.63 ? C23 PTY 403 A 1 
HETATM 23 C C24 PTY . . . J 2 163.954 141.926 168.726 1 143.21 ? C24 PTY 403 A 1 
HETATM 24 C C25 PTY . . . J 2 163.749 142.047 170.231 1 144.07 ? C25 PTY 403 A 1 
HETATM 25 C C26 PTY . . . J 2 165.034 141.714 170.977 1 143.79 ? C26 PTY 403 A 1 
HETATM 26 C C27 PTY . . . J 2 166.104 142.765 170.706 1 144.34 ? C27 PTY 403 A 1 
HETATM 27 C C30 PTY . . . J 2 161.962 129.467 161.471 1 143.7 ? C30 PTY 403 A 1 
HETATM 28 C C31 PTY . . . J 2 160.838 130.46 161.317 1 141.86 ? C31 PTY 403 A 1 
HETATM 29 O O30 PTY . . . J 2 161.751 128.345 161.895 1 144.28 ? O30 PTY 403 A 1 
HETATM 30 C C32 PTY . . . J 2 161.075 131.637 162.254 1 140.42 ? C32 PTY 403 A 1 
HETATM 31 C C33 PTY . . . J 2 160.03 132.718 162.027 1 136.58 ? C33 PTY 403 A 1 
HETATM 32 C C34 PTY . . . J 2 160.487 134.035 162.636 1 137.37 ? C34 PTY 403 A 1 
HETATM 33 C C35 PTY . . . J 2 160.586 133.925 164.15 1 140.64 ? C35 PTY 403 A 1 
HETATM 34 C C36 PTY . . . J 2 159.205 133.986 164.789 1 141.37 ? C36 PTY 403 A 1 
HETATM 35 C C37 PTY . . . J 2 159.276 134.541 166.205 1 140.69 ? C37 PTY 403 A 1 
HETATM 36 C C38 PTY . . . J 2 159.78 135.979 166.214 1 143.93 ? C38 PTY 403 A 1 
HETATM 37 C C39 PTY . . . J 2 161.301 136.04 166.313 1 143.2 ? C39 PTY 403 A 1 
HETATM 38 C C40 PTY . . . J 2 161.771 137.473 166.531 1 141.39 ? C40 PTY 403 A 1 
HETATM 39 C C41 PTY . . . J 2 161.026 138.107 167.699 1 141.57 ? C41 PTY 403 A 1 
HETATM 40 C C42 PTY . . . J 2 161.45 139.555 167.904 1 139.71 ? C42 PTY 403 A 1 
HETATM 41 P P1 PTY . . . J 2 166.294 129.54 156.683 1 159.89 ? P1 PTY 403 A 1 
HETATM 42 O O11 PTY . . . J 2 165.737 128.752 155.392 1 146.27 ? O11 PTY 403 A 1 
HETATM 43 O O12 PTY . . . J 2 167.794 129.381 156.719 1 145.05 ? O12 PTY 403 A 1 
HETATM 44 O O13 PTY . . . J 2 165.689 130.922 156.705 1 143.19 ? O13 PTY 403 A 1 
HETATM 45 O O14 PTY . . . J 2 165.672 128.696 157.903 1 148.57 ? O14 PTY 403 A 1 
HETATM 46 N N1 PTY . . . J 2 165.077 129.471 152.512 1 141.51 ? N1 PTY 403 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           46 
#