data_9E8O # _model_server_result.job_id xf7rDmhs_tPEAp5-SXA_Jw _model_server_result.datetime_utc '2024-12-20 14:39:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9e8o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":502}' # _entry.id 9E8O # _exptl.entry_id 9E8O _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 36 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9E8O _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9E8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 34-meric _pdbx_struct_assembly.oligomeric_count 34 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 36 JA N N ? 36 LA N N ? 36 NA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 DA SG CYS 396 F CYS 396 1_555 DA SG CYS 400 F CYS 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf2 FA SG CYS 633 U CYS 633 1_555 FA SG CYS 659 U CYS 659 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 GA C PHE 226 g PHE 226 1_555 GA N1 CR8 227 g CR8 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale2 GA C3 CR8 227 g CR8 228 1_555 GA N ASN 228 g ASN 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? metalc ? metalc1 A OG1 THR 233 B THR 233 1_555 JA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 IA O1G ATP . B ATP 501 1_555 JA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc3 IA O2G ATP . B ATP 501 1_555 JA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc4 IA O1B ATP . B ATP 501 1_555 JA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc5 IA O3B ATP . B ATP 501 1_555 JA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc6 B OG1 THR 197 C THR 197 1_555 LA MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc7 KA O1G ATP . C ATP 501 1_555 LA MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? metalc ? metalc8 KA O2G ATP . C ATP 501 1_555 LA MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? metalc ? metalc9 C OG1 THR 213 D THR 213 1_555 NA MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc10 MA O2B ADP . D ADP 501 1_555 NA MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc11 D NE2 HIS 113 c HIS 113 1_555 OA ZN ZN . c ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc12 D NE2 HIS 115 c HIS 115 1_555 OA ZN ZN . c ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc13 D OD1 ASP 126 c ASP 126 1_555 OA ZN ZN . c ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc14 D OD2 ASP 126 c ASP 126 1_555 OA ZN ZN . c ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9E8O _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code IA 35 ATP B 1 501 501 ATP ATP . JA 36 MG B 1 502 502 MG MG . KA 35 ATP C 1 501 501 ATP ATP . LA 36 MG C 1 502 502 MG MG . MA 37 ADP D 1 501 501 ADP ADP . NA 36 MG D 1 502 502 MG MG . OA 38 ZN c 1 501 401 ZN ZN . PA 37 ADP A 1 501 501 ADP ADP . QA 37 ADP F 1 501 501 ADP ADP . RA 37 ADP E 1 501 501 ADP ADP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id JA _atom_site.label_entity_id 36 _atom_site.Cartn_x 196.387 _atom_site.Cartn_y 177.616 _atom_site.Cartn_z 212.23 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 100.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 481 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #