data_9EIZ
#
_model_server_result.job_id            ZC6foyFdVoioZAKNHc_h4A 
_model_server_result.datetime_utc      '2025-07-08 06:11:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9eiz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":705}' 
#
_entry.id    9EIZ 
#
_exptl.entry_id    9EIZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.37 
_cell.angle_gamma         90 
_cell.entry_id            9EIZ 
_cell.length_a            45.216 
_cell.length_b            120.165 
_cell.length_c            60.639 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9EIZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 63 A GLU 63 1_555 D MN MN . A MN 703 2_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? 
metalc ? metalc2 A NZ LYS 244 A LYS 244 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc3 A NE2 HIS 264 A HIS 264 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc4 A OG1 THR 291 A THR 291 1_555 B MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc5 A OD1 ASP 311 A ASP 311 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc6 A NE2 HIS 502 A HIS 502 1_555 D MN MN . A MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? 
metalc ? metalc7 A OE1 GLU 607 A GLU 607 1_555 D MN MN . A MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? 
metalc ? metalc8 A OE2 GLU 607 A GLU 607 1_555 D MN MN . A MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? 
metalc ? metalc9 B MN MN . A MN 701 1_555 F O1G GTP . A GTP 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc10 B MN MN . A MN 701 1_555 F O1B GTP . A GTP 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc11 B MN MN . A MN 701 1_555 H O HOH . A HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc12 B MN MN . A MN 701 1_555 H O HOH . A HOH 826 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc13 C MN MN . A MN 702 1_555 E O1 OXL . A OXL 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc14 C MN MN . A MN 702 1_555 E O2 OXL . A OXL 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc15 C MN MN . A MN 702 1_555 F O3G GTP . A GTP 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 129 n n 
PG O2G GTP sing 130 n n 
PG O3G GTP sing 131 n n 
PG O3B GTP sing 132 n n 
O2G HOG2 GTP sing 133 n n 
O3G HOG3 GTP sing 134 n n 
O3B PB GTP sing 135 n n 
PB O1B GTP doub 136 n n 
PB O2B GTP sing 137 n n 
PB O3A GTP sing 138 n n 
O2B HOB2 GTP sing 139 n n 
O3A PA GTP sing 140 n n 
PA O1A GTP doub 141 n n 
PA O2A GTP sing 142 n n 
PA O5' GTP sing 143 n n 
O2A HOA2 GTP sing 144 n n 
O5' C5' GTP sing 145 n n 
C5' C4' GTP sing 146 n n 
C5' H5' GTP sing 147 n n 
C5' "H5''" GTP sing 148 n n 
C4' O4' GTP sing 149 n n 
C4' C3' GTP sing 150 n n 
C4' H4' GTP sing 151 n n 
O4' C1' GTP sing 152 n n 
C3' O3' GTP sing 153 n n 
C3' C2' GTP sing 154 n n 
C3' H3' GTP sing 155 n n 
O3' HO3' GTP sing 156 n n 
C2' O2' GTP sing 157 n n 
C2' C1' GTP sing 158 n n 
C2' H2' GTP sing 159 n n 
O2' HO2' GTP sing 160 n n 
C1' N9 GTP sing 161 n n 
C1' H1' GTP sing 162 n n 
N9 C8 GTP sing 163 n y 
N9 C4 GTP sing 164 n y 
C8 N7 GTP doub 165 n y 
C8 H8 GTP sing 166 n n 
N7 C5 GTP sing 167 n y 
C5 C6 GTP sing 168 n n 
C5 C4 GTP doub 169 n y 
C6 O6 GTP doub 170 n n 
C6 N1 GTP sing 171 n n 
N1 C2 GTP sing 172 n n 
N1 HN1 GTP sing 173 n n 
C2 N2 GTP sing 174 n n 
C2 N3 GTP doub 175 n n 
N2 HN21 GTP sing 176 n n 
N2 HN22 GTP sing 177 n n 
N3 C4 GTP sing 178 n n 
#
_atom_sites.entry_id                     9EIZ 
_atom_sites.fract_transf_matrix[1][1]    0.022116 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008654 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008322 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017709 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 701 700 MN MN . 
C 2 MN A 1 702 701 MN MN . 
D 2 MN A 1 703 702 MN MN . 
E 3 OXL A 1 704 800 OXL OXL . 
F 4 GTP A 1 705 900 GTP GTP . 
G 5 PGE A 1 706 1100 PGE 1PE . 
H 6 HOH A 1 801 42 HOH HOH . 
H 6 HOH A 2 802 44 HOH HOH . 
H 6 HOH A 3 803 56 HOH HOH . 
H 6 HOH A 4 804 1 HOH HOH . 
H 6 HOH A 5 805 49 HOH HOH . 
H 6 HOH A 6 806 12 HOH HOH . 
H 6 HOH A 7 807 82 HOH HOH . 
H 6 HOH A 8 808 58 HOH HOH . 
H 6 HOH A 9 809 52 HOH HOH . 
H 6 HOH A 10 810 70 HOH HOH . 
H 6 HOH A 11 811 54 HOH HOH . 
H 6 HOH A 12 812 77 HOH HOH . 
H 6 HOH A 13 813 59 HOH HOH . 
H 6 HOH A 14 814 83 HOH HOH . 
H 6 HOH A 15 815 75 HOH HOH . 
H 6 HOH A 16 816 67 HOH HOH . 
H 6 HOH A 17 817 81 HOH HOH . 
H 6 HOH A 18 818 62 HOH HOH . 
H 6 HOH A 19 819 76 HOH HOH . 
H 6 HOH A 20 820 51 HOH HOH . 
H 6 HOH A 21 821 17 HOH HOH . 
H 6 HOH A 22 822 11 HOH HOH . 
H 6 HOH A 23 823 10 HOH HOH . 
H 6 HOH A 24 824 68 HOH HOH . 
H 6 HOH A 25 825 34 HOH HOH . 
H 6 HOH A 26 826 41 HOH HOH . 
H 6 HOH A 27 827 43 HOH HOH . 
H 6 HOH A 28 828 45 HOH HOH . 
H 6 HOH A 29 829 13 HOH HOH . 
H 6 HOH A 30 830 66 HOH HOH . 
H 6 HOH A 31 831 39 HOH HOH . 
H 6 HOH A 32 832 4 HOH HOH . 
H 6 HOH A 33 833 55 HOH HOH . 
H 6 HOH A 34 834 84 HOH HOH . 
H 6 HOH A 35 835 60 HOH HOH . 
H 6 HOH A 36 836 29 HOH HOH . 
H 6 HOH A 37 837 50 HOH HOH . 
H 6 HOH A 38 838 9 HOH HOH . 
H 6 HOH A 39 839 69 HOH HOH . 
H 6 HOH A 40 840 30 HOH HOH . 
H 6 HOH A 41 841 80 HOH HOH . 
H 6 HOH A 42 842 57 HOH HOH . 
H 6 HOH A 43 843 79 HOH HOH . 
H 6 HOH A 44 844 48 HOH HOH . 
H 6 HOH A 45 845 63 HOH HOH . 
H 6 HOH A 46 846 28 HOH HOH . 
H 6 HOH A 47 847 85 HOH HOH . 
H 6 HOH A 48 848 8 HOH HOH . 
H 6 HOH A 49 849 21 HOH HOH . 
H 6 HOH A 50 850 18 HOH HOH . 
H 6 HOH A 51 851 23 HOH HOH . 
H 6 HOH A 52 852 40 HOH HOH . 
H 6 HOH A 53 853 6 HOH HOH . 
H 6 HOH A 54 854 16 HOH HOH . 
H 6 HOH A 55 855 7 HOH HOH . 
H 6 HOH A 56 856 19 HOH HOH . 
H 6 HOH A 57 857 2 HOH HOH . 
H 6 HOH A 58 858 38 HOH HOH . 
H 6 HOH A 59 859 53 HOH HOH . 
H 6 HOH A 60 860 33 HOH HOH . 
H 6 HOH A 61 861 24 HOH HOH . 
H 6 HOH A 62 862 37 HOH HOH . 
H 6 HOH A 63 863 65 HOH HOH . 
H 6 HOH A 64 864 27 HOH HOH . 
H 6 HOH A 65 865 5 HOH HOH . 
H 6 HOH A 66 866 64 HOH HOH . 
H 6 HOH A 67 867 20 HOH HOH . 
H 6 HOH A 68 868 46 HOH HOH . 
H 6 HOH A 69 869 3 HOH HOH . 
H 6 HOH A 70 870 72 HOH HOH . 
H 6 HOH A 71 871 22 HOH HOH . 
H 6 HOH A 72 872 78 HOH HOH . 
H 6 HOH A 73 873 15 HOH HOH . 
H 6 HOH A 74 874 26 HOH HOH . 
H 6 HOH A 75 875 35 HOH HOH . 
H 6 HOH A 76 876 36 HOH HOH . 
H 6 HOH A 77 877 71 HOH HOH . 
H 6 HOH A 78 878 73 HOH HOH . 
H 6 HOH A 79 879 14 HOH HOH . 
H 6 HOH A 80 880 25 HOH HOH . 
H 6 HOH A 81 881 74 HOH HOH . 
H 6 HOH A 82 882 47 HOH HOH . 
H 6 HOH A 83 883 31 HOH HOH . 
H 6 HOH A 84 884 86 HOH HOH . 
H 6 HOH A 85 885 61 HOH HOH . 
H 6 HOH A 86 886 32 HOH HOH . 
H 6 HOH A 87 887 87 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . F 4 20.039 -1.717 12.783 1 43.95 ? PG GTP 705 A 1 
HETATM 2 O O1G GTP . . . F 4 18.945 -2.752 12.674 1 45.58 ? O1G GTP 705 A 1 
HETATM 3 O O2G GTP . . . F 4 21.387 -2.367 12.612 1 39.33 ? O2G GTP 705 A 1 
HETATM 4 O O3G GTP . . . F 4 19.854 -0.66 11.718 1 36.7 ? O3G GTP 705 A 1 
HETATM 5 O O3B GTP . . . F 4 19.985 -1.035 14.254 1 54.77 ? O3B GTP 705 A 1 
HETATM 6 P PB GTP . . . F 4 18.639 -0.718 15.099 1 46.23 ? PB GTP 705 A 1 
HETATM 7 O O1B GTP . . . F 4 17.407 -1.246 14.404 1 39.87 ? O1B GTP 705 A 1 
HETATM 8 O O2B GTP . . . F 4 18.519 0.769 15.342 1 49.9 ? O2B GTP 705 A 1 
HETATM 9 O O3A GTP . . . F 4 18.868 -1.478 16.506 1 52.76 ? O3A GTP 705 A 1 
HETATM 10 P PA GTP . . . F 4 17.718 -2.379 17.192 1 52.72 ? PA GTP 705 A 1 
HETATM 11 O O1A GTP . . . F 4 17.638 -3.691 16.437 1 53.54 ? O1A GTP 705 A 1 
HETATM 12 O O2A GTP . . . F 4 16.372 -1.695 17.198 1 43.99 ? O2A GTP 705 A 1 
HETATM 13 O O5' GTP . . . F 4 18.264 -2.661 18.682 1 51.32 ? O5' GTP 705 A 1 
HETATM 14 C C5' GTP . . . F 4 19.611 -2.415 19.019 1 47.98 ? C5' GTP 705 A 1 
HETATM 15 C C4' GTP . . . F 4 19.866 -2.804 20.472 1 49.3 ? C4' GTP 705 A 1 
HETATM 16 O O4' GTP . . . F 4 19.663 -1.66 21.278 1 55.93 ? O4' GTP 705 A 1 
HETATM 17 C C3' GTP . . . F 4 18.902 -3.867 20.973 1 56.35 ? C3' GTP 705 A 1 
HETATM 18 O O3' GTP . . . F 4 19.527 -5.131 21.038 1 57.45 ? O3' GTP 705 A 1 
HETATM 19 C C2' GTP . . . F 4 18.49 -3.408 22.359 1 57.77 ? C2' GTP 705 A 1 
HETATM 20 O O2' GTP . . . F 4 19.082 -4.206 23.36 1 63.12 ? O2' GTP 705 A 1 
HETATM 21 C C1' GTP . . . F 4 18.979 -1.969 22.476 1 56 ? C1' GTP 705 A 1 
HETATM 22 N N9 GTP . . . F 4 17.813 -1.079 22.648 1 45.71 ? N9 GTP 705 A 1 
HETATM 23 C C8 GTP . . . F 4 16.769 -0.916 21.773 1 49.35 ? C8 GTP 705 A 1 
HETATM 24 N N7 GTP . . . F 4 15.9 -0.019 22.293 1 44.79 ? N7 GTP 705 A 1 
HETATM 25 C C5 GTP . . . F 4 16.373 0.395 23.491 1 45.86 ? C5 GTP 705 A 1 
HETATM 26 C C6 GTP . . . F 4 15.885 1.292 24.434 1 42.55 ? C6 GTP 705 A 1 
HETATM 27 O O6 GTP . . . F 4 14.82 1.88 24.241 1 42.8 ? O6 GTP 705 A 1 
HETATM 28 N N1 GTP . . . F 4 16.606 1.515 25.589 1 41.39 ? N1 GTP 705 A 1 
HETATM 29 C C2 GTP . . . F 4 17.797 0.849 25.802 1 41.76 ? C2 GTP 705 A 1 
HETATM 30 N N2 GTP . . . F 4 18.5 1.059 26.911 1 44.21 ? N2 GTP 705 A 1 
HETATM 31 N N3 GTP . . . F 4 18.27 -0.039 24.86 1 49.84 ? N3 GTP 705 A 1 
HETATM 32 C C4 GTP . . . F 4 17.572 -0.265 23.724 1 44.62 ? C4 GTP 705 A 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           32 
#