data_9ELX # _model_server_result.job_id dOsi4IUEE3SsxEmfle5u9w _model_server_result.datetime_utc '2025-07-14 01:44:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9elx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":905}' # _entry.id 9ELX # _exptl.entry_id 9ELX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9ELX _cell.length_a 128.246 _cell.length_b 51.233 _cell.length_c 59.953 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9ELX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 69 A GLU 225 1_555 E MN MN . A MN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc2 A OE1 GLU 69 A GLU 225 1_555 F MN MN . A MN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc3 A OD1 ASP 71 A ASP 227 1_555 E MN MN . A MN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc4 A OD2 ASP 71 A ASP 227 1_555 F MN MN . A MN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc5 A OD2 ASP 163 A ASP 319 1_555 E MN MN . A MN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc6 A NE2 HIS 234 A HIS 390 1_555 D ZN ZN . A ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc7 A SG CYS 240 A CYS 396 1_555 D ZN ZN . A ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc8 A SG CYS 241 A CYS 397 1_555 D ZN ZN . A ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc9 A SG CYS 248 A CYS 404 1_555 D ZN ZN . A ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc10 B O2A ANP . A ANP 901 1_555 E MN MN . A MN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc11 B O3G ANP . A ANP 901 1_555 F MN MN . A MN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc12 B O2B ANP . A ANP 901 1_555 F MN MN . A MN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc13 B O2A ANP . A ANP 901 1_555 F MN MN . A MN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc14 C N18 A1BJH . A A1BJH 902 1_555 E MN MN . A MN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc15 C O21 A1BJH . A A1BJH 902 1_555 E MN MN . A MN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc16 F MN MN . A MN 905 1_555 G O HOH . A HOH 1029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9ELX _atom_sites.fract_transf_matrix[1][1] 0.007798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019519 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01668 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 901 901 ANP ANP . C 3 A1BJH A 1 902 902 A1BJH LIG . D 4 ZN A 1 903 1 ZN ZN . E 5 MN A 1 904 1 MN MN . F 5 MN A 1 905 2 MN MN . G 6 HOH A 1 1001 78 HOH HOH . G 6 HOH A 2 1002 69 HOH HOH . G 6 HOH A 3 1003 127 HOH HOH . G 6 HOH A 4 1004 81 HOH HOH . G 6 HOH A 5 1005 252 HOH HOH . G 6 HOH A 6 1006 171 HOH HOH . G 6 HOH A 7 1007 129 HOH HOH . G 6 HOH A 8 1008 277 HOH HOH . G 6 HOH A 9 1009 101 HOH HOH . G 6 HOH A 10 1010 143 HOH HOH . G 6 HOH A 11 1011 147 HOH HOH . G 6 HOH A 12 1012 218 HOH HOH . G 6 HOH A 13 1013 14 HOH HOH . G 6 HOH A 14 1014 26 HOH HOH . G 6 HOH A 15 1015 136 HOH HOH . G 6 HOH A 16 1016 102 HOH HOH . G 6 HOH A 17 1017 20 HOH HOH . G 6 HOH A 18 1018 103 HOH HOH . G 6 HOH A 19 1019 245 HOH HOH . G 6 HOH A 20 1020 10 HOH HOH . G 6 HOH A 21 1021 240 HOH HOH . G 6 HOH A 22 1022 121 HOH HOH . G 6 HOH A 23 1023 50 HOH HOH . G 6 HOH A 24 1024 97 HOH HOH . G 6 HOH A 25 1025 161 HOH HOH . G 6 HOH A 26 1026 80 HOH HOH . G 6 HOH A 27 1027 76 HOH HOH . G 6 HOH A 28 1028 40 HOH HOH . G 6 HOH A 29 1029 1 HOH HOH . G 6 HOH A 30 1030 125 HOH HOH . G 6 HOH A 31 1031 32 HOH HOH . G 6 HOH A 32 1032 120 HOH HOH . G 6 HOH A 33 1033 90 HOH HOH . G 6 HOH A 34 1034 3 HOH HOH . G 6 HOH A 35 1035 2 HOH HOH . G 6 HOH A 36 1036 48 HOH HOH . G 6 HOH A 37 1037 276 HOH HOH . G 6 HOH A 38 1038 72 HOH HOH . G 6 HOH A 39 1039 98 HOH HOH . G 6 HOH A 40 1040 185 HOH HOH . G 6 HOH A 41 1041 12 HOH HOH . G 6 HOH A 42 1042 112 HOH HOH . G 6 HOH A 43 1043 29 HOH HOH . G 6 HOH A 44 1044 34 HOH HOH . G 6 HOH A 45 1045 122 HOH HOH . G 6 HOH A 46 1046 130 HOH HOH . G 6 HOH A 47 1047 17 HOH HOH . G 6 HOH A 48 1048 44 HOH HOH . G 6 HOH A 49 1049 73 HOH HOH . G 6 HOH A 50 1050 60 HOH HOH . G 6 HOH A 51 1051 117 HOH HOH . G 6 HOH A 52 1052 37 HOH HOH . G 6 HOH A 53 1053 55 HOH HOH . G 6 HOH A 54 1054 96 HOH HOH . G 6 HOH A 55 1055 131 HOH HOH . G 6 HOH A 56 1056 272 HOH HOH . G 6 HOH A 57 1057 176 HOH HOH . G 6 HOH A 58 1058 24 HOH HOH . G 6 HOH A 59 1059 94 HOH HOH . G 6 HOH A 60 1060 6 HOH HOH . G 6 HOH A 61 1061 188 HOH HOH . G 6 HOH A 62 1062 47 HOH HOH . G 6 HOH A 63 1063 35 HOH HOH . G 6 HOH A 64 1064 74 HOH HOH . G 6 HOH A 65 1065 114 HOH HOH . G 6 HOH A 66 1066 115 HOH HOH . G 6 HOH A 67 1067 53 HOH HOH . G 6 HOH A 68 1068 113 HOH HOH . G 6 HOH A 69 1069 99 HOH HOH . G 6 HOH A 70 1070 11 HOH HOH . G 6 HOH A 71 1071 118 HOH HOH . G 6 HOH A 72 1072 71 HOH HOH . G 6 HOH A 73 1073 19 HOH HOH . G 6 HOH A 74 1074 105 HOH HOH . G 6 HOH A 75 1075 25 HOH HOH . G 6 HOH A 76 1076 67 HOH HOH . G 6 HOH A 77 1077 38 HOH HOH . G 6 HOH A 78 1078 65 HOH HOH . G 6 HOH A 79 1079 82 HOH HOH . G 6 HOH A 80 1080 54 HOH HOH . G 6 HOH A 81 1081 259 HOH HOH . G 6 HOH A 82 1082 61 HOH HOH . G 6 HOH A 83 1083 174 HOH HOH . G 6 HOH A 84 1084 83 HOH HOH . G 6 HOH A 85 1085 56 HOH HOH . G 6 HOH A 86 1086 21 HOH HOH . G 6 HOH A 87 1087 15 HOH HOH . G 6 HOH A 88 1088 30 HOH HOH . G 6 HOH A 89 1089 89 HOH HOH . G 6 HOH A 90 1090 51 HOH HOH . G 6 HOH A 91 1091 271 HOH HOH . G 6 HOH A 92 1092 275 HOH HOH . G 6 HOH A 93 1093 108 HOH HOH . G 6 HOH A 94 1094 214 HOH HOH . G 6 HOH A 95 1095 155 HOH HOH . G 6 HOH A 96 1096 18 HOH HOH . G 6 HOH A 97 1097 226 HOH HOH . G 6 HOH A 98 1098 123 HOH HOH . G 6 HOH A 99 1099 36 HOH HOH . G 6 HOH A 100 1100 41 HOH HOH . G 6 HOH A 101 1101 279 HOH HOH . G 6 HOH A 102 1102 243 HOH HOH . G 6 HOH A 103 1103 7 HOH HOH . G 6 HOH A 104 1104 46 HOH HOH . G 6 HOH A 105 1105 159 HOH HOH . G 6 HOH A 106 1106 16 HOH HOH . G 6 HOH A 107 1107 107 HOH HOH . G 6 HOH A 108 1108 286 HOH HOH . G 6 HOH A 109 1109 45 HOH HOH . G 6 HOH A 110 1110 62 HOH HOH . G 6 HOH A 111 1111 238 HOH HOH . G 6 HOH A 112 1112 22 HOH HOH . G 6 HOH A 113 1113 31 HOH HOH . G 6 HOH A 114 1114 237 HOH HOH . G 6 HOH A 115 1115 173 HOH HOH . G 6 HOH A 116 1116 8 HOH HOH . G 6 HOH A 117 1117 85 HOH HOH . G 6 HOH A 118 1118 278 HOH HOH . G 6 HOH A 119 1119 194 HOH HOH . G 6 HOH A 120 1120 156 HOH HOH . G 6 HOH A 121 1121 5 HOH HOH . G 6 HOH A 122 1122 169 HOH HOH . G 6 HOH A 123 1123 92 HOH HOH . G 6 HOH A 124 1124 4 HOH HOH . G 6 HOH A 125 1125 256 HOH HOH . G 6 HOH A 126 1126 126 HOH HOH . G 6 HOH A 127 1127 157 HOH HOH . G 6 HOH A 128 1128 166 HOH HOH . G 6 HOH A 129 1129 42 HOH HOH . G 6 HOH A 130 1130 13 HOH HOH . G 6 HOH A 131 1131 141 HOH HOH . G 6 HOH A 132 1132 23 HOH HOH . G 6 HOH A 133 1133 284 HOH HOH . G 6 HOH A 134 1134 116 HOH HOH . G 6 HOH A 135 1135 145 HOH HOH . G 6 HOH A 136 1136 222 HOH HOH . G 6 HOH A 137 1137 59 HOH HOH . G 6 HOH A 138 1138 142 HOH HOH . G 6 HOH A 139 1139 128 HOH HOH . G 6 HOH A 140 1140 66 HOH HOH . G 6 HOH A 141 1141 180 HOH HOH . G 6 HOH A 142 1142 151 HOH HOH . G 6 HOH A 143 1143 149 HOH HOH . G 6 HOH A 144 1144 132 HOH HOH . G 6 HOH A 145 1145 282 HOH HOH . G 6 HOH A 146 1146 138 HOH HOH . G 6 HOH A 147 1147 68 HOH HOH . G 6 HOH A 148 1148 33 HOH HOH . G 6 HOH A 149 1149 225 HOH HOH . G 6 HOH A 150 1150 168 HOH HOH . G 6 HOH A 151 1151 58 HOH HOH . G 6 HOH A 152 1152 70 HOH HOH . G 6 HOH A 153 1153 148 HOH HOH . G 6 HOH A 154 1154 64 HOH HOH . G 6 HOH A 155 1155 106 HOH HOH . G 6 HOH A 156 1156 179 HOH HOH . G 6 HOH A 157 1157 95 HOH HOH . G 6 HOH A 158 1158 221 HOH HOH . G 6 HOH A 159 1159 111 HOH HOH . G 6 HOH A 160 1160 154 HOH HOH . G 6 HOH A 161 1161 285 HOH HOH . G 6 HOH A 162 1162 100 HOH HOH . G 6 HOH A 163 1163 104 HOH HOH . G 6 HOH A 164 1164 93 HOH HOH . G 6 HOH A 165 1165 77 HOH HOH . G 6 HOH A 166 1166 84 HOH HOH . G 6 HOH A 167 1167 231 HOH HOH . G 6 HOH A 168 1168 39 HOH HOH . G 6 HOH A 169 1169 202 HOH HOH . G 6 HOH A 170 1170 109 HOH HOH . G 6 HOH A 171 1171 43 HOH HOH . G 6 HOH A 172 1172 236 HOH HOH . G 6 HOH A 173 1173 233 HOH HOH . G 6 HOH A 174 1174 160 HOH HOH . G 6 HOH A 175 1175 274 HOH HOH . G 6 HOH A 176 1176 146 HOH HOH . G 6 HOH A 177 1177 268 HOH HOH . G 6 HOH A 178 1178 28 HOH HOH . G 6 HOH A 179 1179 241 HOH HOH . G 6 HOH A 180 1180 162 HOH HOH . G 6 HOH A 181 1181 270 HOH HOH . G 6 HOH A 182 1182 186 HOH HOH . G 6 HOH A 183 1183 265 HOH HOH . G 6 HOH A 184 1184 269 HOH HOH . G 6 HOH A 185 1185 184 HOH HOH . G 6 HOH A 186 1186 281 HOH HOH . G 6 HOH A 187 1187 273 HOH HOH . G 6 HOH A 188 1188 87 HOH HOH . G 6 HOH A 189 1189 209 HOH HOH . G 6 HOH A 190 1190 57 HOH HOH . G 6 HOH A 191 1191 133 HOH HOH . G 6 HOH A 192 1192 216 HOH HOH . G 6 HOH A 193 1193 228 HOH HOH . G 6 HOH A 194 1194 79 HOH HOH . G 6 HOH A 195 1195 235 HOH HOH . G 6 HOH A 196 1196 124 HOH HOH . G 6 HOH A 197 1197 283 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x -15.256 _atom_site.Cartn_y 19.263 _atom_site.Cartn_z -14.687 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 905 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #