data_9EM1 # _model_server_result.job_id 7EmzzuOsusyK0f6BBUcLKA _model_server_result.datetime_utc '2024-10-26 14:21:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9em1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 9EM1 # _exptl.entry_id 9EM1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9EM1 _cell.length_a 53.963 _cell.length_b 53.963 _cell.length_c 211.752 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EM1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 105.876 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 91 A CYS 91 1_555 A SG CYS 221 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc1 A OD2 ASP 25 A ASP 25 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc2 A O ASP 27 A ASP 27 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc3 A OD1 ASP 238 A ASP 238 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc4 B MG MG . A MG 301 1_555 E O4 PO4 . A PO4 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc5 B MG MG . A MG 301 1_555 G O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc6 B MG MG . A MG 301 1_555 G O HOH . A HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 273 n n P O2 PO4 sing 274 n n P O3 PO4 sing 275 n n P O4 PO4 sing 276 n n # _atom_sites.entry_id 9EM1 _atom_sites.fract_transf_matrix[1][1] 0.018531 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004723 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 305 MG MG . C 3 UK9 A 1 302 306 UK9 78F . D 4 GOL A 1 303 309 GOL GOL . E 5 PO4 A 1 304 1 PO4 PO4 . F 5 PO4 A 1 305 2 PO4 PO4 . G 6 HOH A 1 401 192 HOH HOH . G 6 HOH A 2 402 140 HOH HOH . G 6 HOH A 3 403 156 HOH HOH . G 6 HOH A 4 404 122 HOH HOH . G 6 HOH A 5 405 49 HOH HOH . G 6 HOH A 6 406 100 HOH HOH . G 6 HOH A 7 407 259 HOH HOH . G 6 HOH A 8 408 222 HOH HOH . G 6 HOH A 9 409 188 HOH HOH . G 6 HOH A 10 410 223 HOH HOH . G 6 HOH A 11 411 87 HOH HOH . G 6 HOH A 12 412 60 HOH HOH . G 6 HOH A 13 413 268 HOH HOH . G 6 HOH A 14 414 208 HOH HOH . G 6 HOH A 15 415 20 HOH HOH . G 6 HOH A 16 416 153 HOH HOH . G 6 HOH A 17 417 227 HOH HOH . G 6 HOH A 18 418 266 HOH HOH . G 6 HOH A 19 419 271 HOH HOH . G 6 HOH A 20 420 126 HOH HOH . G 6 HOH A 21 421 125 HOH HOH . G 6 HOH A 22 422 31 HOH HOH . G 6 HOH A 23 423 78 HOH HOH . G 6 HOH A 24 424 11 HOH HOH . G 6 HOH A 25 425 79 HOH HOH . G 6 HOH A 26 426 169 HOH HOH . G 6 HOH A 27 427 130 HOH HOH . G 6 HOH A 28 428 80 HOH HOH . G 6 HOH A 29 429 142 HOH HOH . G 6 HOH A 30 430 6 HOH HOH . G 6 HOH A 31 431 241 HOH HOH . G 6 HOH A 32 432 50 HOH HOH . G 6 HOH A 33 433 176 HOH HOH . G 6 HOH A 34 434 27 HOH HOH . G 6 HOH A 35 435 102 HOH HOH . G 6 HOH A 36 436 119 HOH HOH . G 6 HOH A 37 437 170 HOH HOH . G 6 HOH A 38 438 242 HOH HOH . G 6 HOH A 39 439 38 HOH HOH . G 6 HOH A 40 440 51 HOH HOH . G 6 HOH A 41 441 93 HOH HOH . G 6 HOH A 42 442 217 HOH HOH . G 6 HOH A 43 443 265 HOH HOH . G 6 HOH A 44 444 85 HOH HOH . G 6 HOH A 45 445 111 HOH HOH . G 6 HOH A 46 446 54 HOH HOH . G 6 HOH A 47 447 23 HOH HOH . G 6 HOH A 48 448 73 HOH HOH . G 6 HOH A 49 449 5 HOH HOH . G 6 HOH A 50 450 33 HOH HOH . G 6 HOH A 51 451 21 HOH HOH . G 6 HOH A 52 452 221 HOH HOH . G 6 HOH A 53 453 72 HOH HOH . G 6 HOH A 54 454 14 HOH HOH . G 6 HOH A 55 455 46 HOH HOH . G 6 HOH A 56 456 25 HOH HOH . G 6 HOH A 57 457 24 HOH HOH . G 6 HOH A 58 458 10 HOH HOH . G 6 HOH A 59 459 113 HOH HOH . G 6 HOH A 60 460 22 HOH HOH . G 6 HOH A 61 461 103 HOH HOH . G 6 HOH A 62 462 173 HOH HOH . G 6 HOH A 63 463 68 HOH HOH . G 6 HOH A 64 464 66 HOH HOH . G 6 HOH A 65 465 98 HOH HOH . G 6 HOH A 66 466 181 HOH HOH . G 6 HOH A 67 467 69 HOH HOH . G 6 HOH A 68 468 252 HOH HOH . G 6 HOH A 69 469 114 HOH HOH . G 6 HOH A 70 470 108 HOH HOH . G 6 HOH A 71 471 189 HOH HOH . G 6 HOH A 72 472 28 HOH HOH . G 6 HOH A 73 473 32 HOH HOH . G 6 HOH A 74 474 76 HOH HOH . G 6 HOH A 75 475 83 HOH HOH . G 6 HOH A 76 476 88 HOH HOH . G 6 HOH A 77 477 185 HOH HOH . G 6 HOH A 78 478 29 HOH HOH . G 6 HOH A 79 479 210 HOH HOH . G 6 HOH A 80 480 135 HOH HOH . G 6 HOH A 81 481 15 HOH HOH . G 6 HOH A 82 482 92 HOH HOH . G 6 HOH A 83 483 58 HOH HOH . G 6 HOH A 84 484 180 HOH HOH . G 6 HOH A 85 485 4 HOH HOH . G 6 HOH A 86 486 178 HOH HOH . G 6 HOH A 87 487 44 HOH HOH . G 6 HOH A 88 488 3 HOH HOH . G 6 HOH A 89 489 129 HOH HOH . G 6 HOH A 90 490 128 HOH HOH . G 6 HOH A 91 491 151 HOH HOH . G 6 HOH A 92 492 155 HOH HOH . G 6 HOH A 93 493 12 HOH HOH . G 6 HOH A 94 494 36 HOH HOH . G 6 HOH A 95 495 1 HOH HOH . G 6 HOH A 96 496 7 HOH HOH . G 6 HOH A 97 497 57 HOH HOH . G 6 HOH A 98 498 104 HOH HOH . G 6 HOH A 99 499 195 HOH HOH . G 6 HOH A 100 500 52 HOH HOH . G 6 HOH A 101 501 16 HOH HOH . G 6 HOH A 102 502 39 HOH HOH . G 6 HOH A 103 503 196 HOH HOH . G 6 HOH A 104 504 118 HOH HOH . G 6 HOH A 105 505 134 HOH HOH . G 6 HOH A 106 506 190 HOH HOH . G 6 HOH A 107 507 53 HOH HOH . G 6 HOH A 108 508 41 HOH HOH . G 6 HOH A 109 509 99 HOH HOH . G 6 HOH A 110 510 47 HOH HOH . G 6 HOH A 111 511 205 HOH HOH . G 6 HOH A 112 512 43 HOH HOH . G 6 HOH A 113 513 13 HOH HOH . G 6 HOH A 114 514 17 HOH HOH . G 6 HOH A 115 515 37 HOH HOH . G 6 HOH A 116 516 262 HOH HOH . G 6 HOH A 117 517 91 HOH HOH . G 6 HOH A 118 518 211 HOH HOH . G 6 HOH A 119 519 236 HOH HOH . G 6 HOH A 120 520 77 HOH HOH . G 6 HOH A 121 521 177 HOH HOH . G 6 HOH A 122 522 231 HOH HOH . G 6 HOH A 123 523 40 HOH HOH . G 6 HOH A 124 524 158 HOH HOH . G 6 HOH A 125 525 168 HOH HOH . G 6 HOH A 126 526 65 HOH HOH . G 6 HOH A 127 527 35 HOH HOH . G 6 HOH A 128 528 42 HOH HOH . G 6 HOH A 129 529 34 HOH HOH . G 6 HOH A 130 530 270 HOH HOH . G 6 HOH A 131 531 84 HOH HOH . G 6 HOH A 132 532 164 HOH HOH . G 6 HOH A 133 533 96 HOH HOH . G 6 HOH A 134 534 89 HOH HOH . G 6 HOH A 135 535 229 HOH HOH . G 6 HOH A 136 536 90 HOH HOH . G 6 HOH A 137 537 67 HOH HOH . G 6 HOH A 138 538 136 HOH HOH . G 6 HOH A 139 539 110 HOH HOH . G 6 HOH A 140 540 183 HOH HOH . G 6 HOH A 141 541 138 HOH HOH . G 6 HOH A 142 542 106 HOH HOH . G 6 HOH A 143 543 121 HOH HOH . G 6 HOH A 144 544 70 HOH HOH . G 6 HOH A 145 545 120 HOH HOH . G 6 HOH A 146 546 61 HOH HOH . G 6 HOH A 147 547 237 HOH HOH . G 6 HOH A 148 548 163 HOH HOH . G 6 HOH A 149 549 116 HOH HOH . G 6 HOH A 150 550 26 HOH HOH . G 6 HOH A 151 551 8 HOH HOH . G 6 HOH A 152 552 123 HOH HOH . G 6 HOH A 153 553 232 HOH HOH . G 6 HOH A 154 554 9 HOH HOH . G 6 HOH A 155 555 97 HOH HOH . G 6 HOH A 156 556 257 HOH HOH . G 6 HOH A 157 557 82 HOH HOH . G 6 HOH A 158 558 238 HOH HOH . G 6 HOH A 159 559 48 HOH HOH . G 6 HOH A 160 560 215 HOH HOH . G 6 HOH A 161 561 174 HOH HOH . G 6 HOH A 162 562 115 HOH HOH . G 6 HOH A 163 563 165 HOH HOH . G 6 HOH A 164 564 154 HOH HOH . G 6 HOH A 165 565 220 HOH HOH . G 6 HOH A 166 566 74 HOH HOH . G 6 HOH A 167 567 109 HOH HOH . G 6 HOH A 168 568 191 HOH HOH . G 6 HOH A 169 569 45 HOH HOH . G 6 HOH A 170 570 19 HOH HOH . G 6 HOH A 171 571 214 HOH HOH . G 6 HOH A 172 572 198 HOH HOH . G 6 HOH A 173 573 139 HOH HOH . G 6 HOH A 174 574 95 HOH HOH . G 6 HOH A 175 575 30 HOH HOH . G 6 HOH A 176 576 273 HOH HOH . G 6 HOH A 177 577 107 HOH HOH . G 6 HOH A 178 578 18 HOH HOH . G 6 HOH A 179 579 149 HOH HOH . G 6 HOH A 180 580 75 HOH HOH . G 6 HOH A 181 581 132 HOH HOH . G 6 HOH A 182 582 175 HOH HOH . G 6 HOH A 183 583 62 HOH HOH . G 6 HOH A 184 584 233 HOH HOH . G 6 HOH A 185 585 56 HOH HOH . G 6 HOH A 186 586 112 HOH HOH . G 6 HOH A 187 587 94 HOH HOH . G 6 HOH A 188 588 253 HOH HOH . G 6 HOH A 189 589 55 HOH HOH . G 6 HOH A 190 590 101 HOH HOH . G 6 HOH A 191 591 197 HOH HOH . G 6 HOH A 192 592 64 HOH HOH . G 6 HOH A 193 593 207 HOH HOH . G 6 HOH A 194 594 2 HOH HOH . G 6 HOH A 195 595 254 HOH HOH . G 6 HOH A 196 596 234 HOH HOH . G 6 HOH A 197 597 172 HOH HOH . G 6 HOH A 198 598 194 HOH HOH . G 6 HOH A 199 599 269 HOH HOH . G 6 HOH A 200 600 159 HOH HOH . G 6 HOH A 201 601 63 HOH HOH . G 6 HOH A 202 602 105 HOH HOH . G 6 HOH A 203 603 179 HOH HOH . G 6 HOH A 204 604 150 HOH HOH . G 6 HOH A 205 605 256 HOH HOH . G 6 HOH A 206 606 226 HOH HOH . G 6 HOH A 207 607 239 HOH HOH . G 6 HOH A 208 608 248 HOH HOH . G 6 HOH A 209 609 209 HOH HOH . G 6 HOH A 210 610 161 HOH HOH . G 6 HOH A 211 611 203 HOH HOH . G 6 HOH A 212 612 204 HOH HOH . G 6 HOH A 213 613 206 HOH HOH . G 6 HOH A 214 614 251 HOH HOH . G 6 HOH A 215 615 193 HOH HOH . G 6 HOH A 216 616 201 HOH HOH . G 6 HOH A 217 617 186 HOH HOH . G 6 HOH A 218 618 246 HOH HOH . G 6 HOH A 219 619 274 HOH HOH . G 6 HOH A 220 620 117 HOH HOH . G 6 HOH A 221 621 264 HOH HOH . G 6 HOH A 222 622 86 HOH HOH . G 6 HOH A 223 623 267 HOH HOH . G 6 HOH A 224 624 218 HOH HOH . G 6 HOH A 225 625 212 HOH HOH . G 6 HOH A 226 626 152 HOH HOH . G 6 HOH A 227 627 137 HOH HOH . G 6 HOH A 228 628 71 HOH HOH . G 6 HOH A 229 629 272 HOH HOH . G 6 HOH A 230 630 235 HOH HOH . G 6 HOH A 231 631 148 HOH HOH . G 6 HOH A 232 632 216 HOH HOH . G 6 HOH A 233 633 162 HOH HOH . G 6 HOH A 234 634 133 HOH HOH . G 6 HOH A 235 635 81 HOH HOH . G 6 HOH A 236 636 263 HOH HOH . G 6 HOH A 237 637 225 HOH HOH . G 6 HOH A 238 638 131 HOH HOH . G 6 HOH A 239 639 249 HOH HOH . G 6 HOH A 240 640 240 HOH HOH . G 6 HOH A 241 641 166 HOH HOH . G 6 HOH A 242 642 200 HOH HOH . G 6 HOH A 243 643 243 HOH HOH . G 6 HOH A 244 644 228 HOH HOH . G 6 HOH A 245 645 247 HOH HOH . G 6 HOH A 246 646 182 HOH HOH . G 6 HOH A 247 647 244 HOH HOH . G 6 HOH A 248 648 144 HOH HOH . G 6 HOH A 249 649 127 HOH HOH . G 6 HOH A 250 650 245 HOH HOH . G 6 HOH A 251 651 202 HOH HOH . G 6 HOH A 252 652 145 HOH HOH . G 6 HOH A 253 653 157 HOH HOH . G 6 HOH A 254 654 255 HOH HOH . G 6 HOH A 255 655 230 HOH HOH . G 6 HOH A 256 656 143 HOH HOH . G 6 HOH A 257 657 250 HOH HOH . G 6 HOH A 258 658 199 HOH HOH . G 6 HOH A 259 659 184 HOH HOH . G 6 HOH A 260 660 213 HOH HOH . G 6 HOH A 261 661 160 HOH HOH . G 6 HOH A 262 662 147 HOH HOH . G 6 HOH A 263 663 261 HOH HOH . G 6 HOH A 264 664 258 HOH HOH . G 6 HOH A 265 665 124 HOH HOH . G 6 HOH A 266 666 59 HOH HOH . G 6 HOH A 267 667 167 HOH HOH . G 6 HOH A 268 668 141 HOH HOH . G 6 HOH A 269 669 224 HOH HOH . G 6 HOH A 270 670 219 HOH HOH . G 6 HOH A 271 671 187 HOH HOH . G 6 HOH A 272 672 146 HOH HOH . G 6 HOH A 273 673 171 HOH HOH . G 6 HOH A 274 674 260 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 5 1.479 -5.144 32.931 1 24.49 ? P PO4 304 A 1 HETATM 2 O O1 PO4 . . . E 5 1.94 -5.416 31.496 1 25.55 ? O1 PO4 304 A 1 HETATM 3 O O2 PO4 . . . E 5 1.595 -3.667 33.228 1 24.76 ? O2 PO4 304 A 1 HETATM 4 O O3 PO4 . . . E 5 2.432 -5.902 33.898 1 28.17 ? O3 PO4 304 A 1 HETATM 5 O O4 PO4 . . . E 5 0.039 -5.634 33.042 1 25.37 ? O4 PO4 304 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #