data_9EMV # _model_server_result.job_id NSUncO924464UxPgUxI_2w _model_server_result.datetime_utc '2024-11-01 11:22:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9emv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":7203}' # _entry.id 9EMV # _exptl.entry_id 9EMV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9EMV _cell.length_a 169.51 _cell.length_b 169.51 _cell.length_c 52.25 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 75 B CYS 4327 1_555 N ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 B SG CYS 78 B CYS 4330 1_555 N ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 B NE2 HIS 84 B HIS 4336 1_555 N ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc4 B SG CYS 91 B CYS 4343 1_555 N ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc5 B SG CYS 118 B CYS 4370 1_555 O ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc6 B SG CYS 121 B CYS 4373 1_555 O ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 B SG CYS 129 B CYS 4381 1_555 O ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc8 B SG CYS 131 B CYS 4383 1_555 O ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 313 n n O1 C6 MES sing 314 n n C2 C3 MES sing 315 n n C2 H21 MES sing 316 n n C2 H22 MES sing 317 n n C3 N4 MES sing 318 n n C3 H31 MES sing 319 n n C3 H32 MES sing 320 n n N4 C5 MES sing 321 n n N4 C7 MES sing 322 n n N4 HN4 MES sing 323 n n C5 C6 MES sing 324 n n C5 H51 MES sing 325 n n C5 H52 MES sing 326 n n C6 H61 MES sing 327 n n C6 H62 MES sing 328 n n C7 C8 MES sing 329 n n C7 H71 MES sing 330 n n C7 H72 MES sing 331 n n C8 S MES sing 332 n n C8 H81 MES sing 333 n n C8 H82 MES sing 334 n n S O1S MES doub 335 n n S O2S MES doub 336 n n S O3S MES sing 337 n n # _atom_sites.entry_id 9EMV _atom_sites.fract_transf_matrix[1][1] 0.005899 _atom_sites.fract_transf_matrix[1][2] 0.003406 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006812 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SGV A 1 7201 7907 SGV SGV . D 4 GTA A 1 7202 7908 GTA GTA . E 5 MES A 1 7203 7913 MES MES . F 6 SAH A 1 7204 7914 SAH SAH . G 7 EDO A 1 7205 7916 EDO EDO . H 7 EDO A 1 7206 7919 EDO EDO . I 7 EDO A 1 7207 7920 EDO EDO . J 7 EDO A 1 7208 7921 EDO EDO . K 7 EDO A 1 7209 7922 EDO EDO . L 7 EDO A 1 7210 7923 EDO EDO . M 8 V9G A 1 7211 7924 V9G V9G . N 9 ZN B 1 4401 8654 ZN ZN . O 9 ZN B 1 4402 8655 ZN ZN . P 7 EDO B 1 4403 8656 EDO EDO . Q 7 EDO B 1 4404 8657 EDO EDO . R 10 HOH A 1 7301 2 HOH HOH . R 10 HOH A 2 7302 33 HOH HOH . R 10 HOH A 3 7303 15 HOH HOH . R 10 HOH A 4 7304 123 HOH HOH . R 10 HOH A 5 7305 72 HOH HOH . R 10 HOH A 6 7306 7 HOH HOH . R 10 HOH A 7 7307 3 HOH HOH . R 10 HOH A 8 7308 80 HOH HOH . R 10 HOH A 9 7309 157 HOH HOH . R 10 HOH A 10 7310 102 HOH HOH . R 10 HOH A 11 7311 14 HOH HOH . R 10 HOH A 12 7312 40 HOH HOH . R 10 HOH A 13 7313 37 HOH HOH . R 10 HOH A 14 7314 138 HOH HOH . R 10 HOH A 15 7315 8 HOH HOH . R 10 HOH A 16 7316 20 HOH HOH . R 10 HOH A 17 7317 35 HOH HOH . R 10 HOH A 18 7318 4 HOH HOH . R 10 HOH A 19 7319 19 HOH HOH . R 10 HOH A 20 7320 9 HOH HOH . R 10 HOH A 21 7321 100 HOH HOH . R 10 HOH A 22 7322 134 HOH HOH . R 10 HOH A 23 7323 29 HOH HOH . R 10 HOH A 24 7324 1 HOH HOH . R 10 HOH A 25 7325 21 HOH HOH . R 10 HOH A 26 7326 31 HOH HOH . R 10 HOH A 27 7327 49 HOH HOH . R 10 HOH A 28 7328 52 HOH HOH . R 10 HOH A 29 7329 41 HOH HOH . R 10 HOH A 30 7330 122 HOH HOH . R 10 HOH A 31 7331 86 HOH HOH . R 10 HOH A 32 7332 56 HOH HOH . R 10 HOH A 33 7333 45 HOH HOH . R 10 HOH A 34 7334 13 HOH HOH . R 10 HOH A 35 7335 152 HOH HOH . R 10 HOH A 36 7336 125 HOH HOH . R 10 HOH A 37 7337 44 HOH HOH . R 10 HOH A 38 7338 5 HOH HOH . R 10 HOH A 39 7339 89 HOH HOH . R 10 HOH A 40 7340 77 HOH HOH . R 10 HOH A 41 7341 106 HOH HOH . R 10 HOH A 42 7342 179 HOH HOH . R 10 HOH A 43 7343 55 HOH HOH . R 10 HOH A 44 7344 30 HOH HOH . R 10 HOH A 45 7345 66 HOH HOH . R 10 HOH A 46 7346 177 HOH HOH . R 10 HOH A 47 7347 111 HOH HOH . R 10 HOH A 48 7348 150 HOH HOH . R 10 HOH A 49 7349 114 HOH HOH . R 10 HOH A 50 7350 158 HOH HOH . R 10 HOH A 51 7351 151 HOH HOH . R 10 HOH A 52 7352 25 HOH HOH . R 10 HOH A 53 7353 75 HOH HOH . R 10 HOH A 54 7354 140 HOH HOH . R 10 HOH A 55 7355 131 HOH HOH . R 10 HOH A 56 7356 59 HOH HOH . R 10 HOH A 57 7357 178 HOH HOH . R 10 HOH A 58 7358 11 HOH HOH . R 10 HOH A 59 7359 32 HOH HOH . R 10 HOH A 60 7360 69 HOH HOH . R 10 HOH A 61 7361 97 HOH HOH . R 10 HOH A 62 7362 132 HOH HOH . R 10 HOH A 63 7363 18 HOH HOH . R 10 HOH A 64 7364 23 HOH HOH . R 10 HOH A 65 7365 60 HOH HOH . R 10 HOH A 66 7366 109 HOH HOH . R 10 HOH A 67 7367 48 HOH HOH . R 10 HOH A 68 7368 144 HOH HOH . R 10 HOH A 69 7369 115 HOH HOH . R 10 HOH A 70 7370 141 HOH HOH . R 10 HOH A 71 7371 180 HOH HOH . R 10 HOH A 72 7372 167 HOH HOH . R 10 HOH A 73 7373 126 HOH HOH . R 10 HOH A 74 7374 171 HOH HOH . R 10 HOH A 75 7375 92 HOH HOH . R 10 HOH A 76 7376 105 HOH HOH . R 10 HOH A 77 7377 113 HOH HOH . R 10 HOH A 78 7378 188 HOH HOH . R 10 HOH A 79 7379 187 HOH HOH . R 10 HOH A 80 7380 164 HOH HOH . R 10 HOH A 81 7381 63 HOH HOH . R 10 HOH A 82 7382 153 HOH HOH . R 10 HOH A 83 7383 128 HOH HOH . R 10 HOH A 84 7384 58 HOH HOH . R 10 HOH A 85 7385 148 HOH HOH . R 10 HOH A 86 7386 118 HOH HOH . R 10 HOH A 87 7387 53 HOH HOH . R 10 HOH A 88 7388 175 HOH HOH . R 10 HOH A 89 7389 176 HOH HOH . R 10 HOH A 90 7390 108 HOH HOH . R 10 HOH A 91 7391 186 HOH HOH . R 10 HOH A 92 7392 136 HOH HOH . R 10 HOH A 93 7393 173 HOH HOH . R 10 HOH A 94 7394 124 HOH HOH . R 10 HOH A 95 7395 184 HOH HOH . R 10 HOH A 96 7396 163 HOH HOH . R 10 HOH A 97 7397 91 HOH HOH . R 10 HOH A 98 7398 170 HOH HOH . R 10 HOH A 99 7399 146 HOH HOH . R 10 HOH A 100 7400 155 HOH HOH . R 10 HOH A 101 7401 71 HOH HOH . R 10 HOH A 102 7402 127 HOH HOH . R 10 HOH A 103 7403 165 HOH HOH . R 10 HOH A 104 7404 81 HOH HOH . R 10 HOH A 105 7405 88 HOH HOH . R 10 HOH A 106 7406 142 HOH HOH . R 10 HOH A 107 7407 159 HOH HOH . R 10 HOH A 108 7408 143 HOH HOH . R 10 HOH A 109 7409 149 HOH HOH . R 10 HOH A 110 7410 174 HOH HOH . R 10 HOH A 111 7411 38 HOH HOH . R 10 HOH A 112 7412 90 HOH HOH . R 10 HOH A 113 7413 87 HOH HOH . R 10 HOH A 114 7414 96 HOH HOH . R 10 HOH A 115 7415 94 HOH HOH . R 10 HOH A 116 7416 166 HOH HOH . R 10 HOH A 117 7417 181 HOH HOH . R 10 HOH A 118 7418 154 HOH HOH . R 10 HOH A 119 7419 183 HOH HOH . R 10 HOH A 120 7420 185 HOH HOH . R 10 HOH A 121 7421 182 HOH HOH . S 10 HOH B 1 4501 62 HOH HOH . S 10 HOH B 2 4502 172 HOH HOH . S 10 HOH B 3 4503 46 HOH HOH . S 10 HOH B 4 4504 137 HOH HOH . S 10 HOH B 5 4505 64 HOH HOH . S 10 HOH B 6 4506 42 HOH HOH . S 10 HOH B 7 4507 74 HOH HOH . S 10 HOH B 8 4508 39 HOH HOH . S 10 HOH B 9 4509 10 HOH HOH . S 10 HOH B 10 4510 22 HOH HOH . S 10 HOH B 11 4511 24 HOH HOH . S 10 HOH B 12 4512 28 HOH HOH . S 10 HOH B 13 4513 36 HOH HOH . S 10 HOH B 14 4514 107 HOH HOH . S 10 HOH B 15 4515 83 HOH HOH . S 10 HOH B 16 4516 104 HOH HOH . S 10 HOH B 17 4517 70 HOH HOH . S 10 HOH B 18 4518 54 HOH HOH . S 10 HOH B 19 4519 43 HOH HOH . S 10 HOH B 20 4520 67 HOH HOH . S 10 HOH B 21 4521 85 HOH HOH . S 10 HOH B 22 4522 130 HOH HOH . S 10 HOH B 23 4523 162 HOH HOH . S 10 HOH B 24 4524 156 HOH HOH . S 10 HOH B 25 4525 160 HOH HOH . S 10 HOH B 26 4526 169 HOH HOH . S 10 HOH B 27 4527 61 HOH HOH . S 10 HOH B 28 4528 168 HOH HOH . S 10 HOH B 29 4529 161 HOH HOH . S 10 HOH B 30 4530 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . F . E 5 -70.121 35.214 -9.93 1 56.38 ? O1 MES 7203 A 1 HETATM 2 C C2 MES . F . E 5 -71.001 36.2 -9.368 1 78.92 ? C2 MES 7203 A 1 HETATM 3 C C3 MES . F . E 5 -70.317 37.431 -8.745 1 74.72 ? C3 MES 7203 A 1 HETATM 4 N N4 MES . F . E 5 -69.278 36.965 -7.848 1 67.19 ? N4 MES 7203 A 1 HETATM 5 C C5 MES . F . E 5 -68.353 35.959 -8.395 1 75.49 ? C5 MES 7203 A 1 HETATM 6 C C6 MES . F . E 5 -69.105 34.794 -9.043 1 58.7 ? C6 MES 7203 A 1 HETATM 7 C C7 MES . F . E 5 -68.52 38.063 -7.22 1 76.97 ? C7 MES 7203 A 1 HETATM 8 C C8 MES . F . E 5 -69.459 38.847 -6.299 1 96.79 ? C8 MES 7203 A 1 HETATM 9 S S MES . F . E 5 -68.711 40.121 -5.488 1 130.89 ? S MES 7203 A 1 HETATM 10 O O1S MES . F . E 5 -69.274 41.422 -6.004 1 63.33 ? O1S MES 7203 A 1 HETATM 11 O O2S MES . F . E 5 -67.233 40.062 -5.663 1 90.78 ? O2S MES 7203 A 1 HETATM 12 O O3S MES . F . E 5 -68.997 39.954 -4.035 1 88.31 ? O3S MES 7203 A 1 HETATM 13 H H21 MES . F . E 5 -71.674 36.546 -10.156 1 94.7 ? H21 MES 7203 A 1 HETATM 14 H H22 MES . F . E 5 -71.605 35.718 -8.597 1 94.7 ? H22 MES 7203 A 1 HETATM 15 H H31 MES . F . E 5 -71.047 38.03 -8.198 1 89.66 ? H31 MES 7203 A 1 HETATM 16 H H32 MES . F . E 5 -69.885 38.058 -9.527 1 89.66 ? H32 MES 7203 A 1 HETATM 17 H HN4 MES . F . E 5 -69.813 36.485 -7.139 1 80.63 ? HN4 MES 7203 A 1 HETATM 18 H H51 MES . F . E 5 -67.719 35.577 -7.593 1 90.59 ? H51 MES 7203 A 1 HETATM 19 H H52 MES . F . E 5 -67.707 36.429 -9.139 1 90.59 ? H52 MES 7203 A 1 HETATM 20 H H61 MES . F . E 5 -68.392 34.172 -9.589 1 70.44 ? H61 MES 7203 A 1 HETATM 21 H H62 MES . F . E 5 -69.551 34.18 -8.257 1 70.44 ? H62 MES 7203 A 1 HETATM 22 H H71 MES . F . E 5 -68.112 38.723 -7.989 1 92.37 ? H71 MES 7203 A 1 HETATM 23 H H72 MES . F . E 5 -67.683 37.66 -6.646 1 92.37 ? H72 MES 7203 A 1 HETATM 24 H H81 MES . F . E 5 -69.88 38.16 -5.562 1 116.15 ? H81 MES 7203 A 1 HETATM 25 H H82 MES . F . E 5 -70.283 39.245 -6.895 1 116.15 ? H82 MES 7203 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #