data_9EMY # _model_server_result.job_id i69UlYSyvHRmz_MK1uOHGw _model_server_result.datetime_utc '2025-06-20 23:36:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9emy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":602}' # _entry.id 9EMY # _exptl.entry_id 9EMY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 354.436 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.02 _cell.angle_gamma 90 _cell.entry_id 9EMY _cell.length_a 82.397 _cell.length_b 121.657 _cell.length_c 151.059 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EMY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_defined_assembly 1 PISA trimeric 3 author_defined_assembly 2 PISA trimeric 3 author_defined_assembly 3 PISA trimeric 3 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,M,N,R,T,U 1 1 B,D,F,O,S 2 1 G,I,K,P,V,X 3 1 H,J,L,Q,W,Y 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 22 C CYS 24 1_555 C SG CYS 96 C CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf2 D SG CYS 22 D CYS 24 1_555 D SG CYS 96 D CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf3 E SG CYS 22 E CYS 24 1_555 E SG CYS 96 E CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 F SG CYS 22 F CYS 24 1_555 F SG CYS 96 F CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf5 I SG CYS 22 I CYS 24 1_555 I SG CYS 96 I CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf6 J SG CYS 22 J CYS 24 1_555 J SG CYS 96 J CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf7 K SG CYS 22 K CYS 24 1_555 K SG CYS 96 K CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf8 L SG CYS 22 L CYS 24 1_555 L SG CYS 96 L CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? # _chem_comp.formula 'C16 H34 O8' _chem_comp.formula_weight 354.436 _chem_comp.id PE4 _chem_comp.mon_nstd_flag . _chem_comp.name 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG4000' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PE4 sing 286 n n O1 HO1 PE4 sing 287 n n C1 C2 PE4 sing 288 n n C1 H11 PE4 sing 289 n n C1 H12 PE4 sing 290 n n C2 O2 PE4 sing 291 n n C2 H21 PE4 sing 292 n n C2 H22 PE4 sing 293 n n O2 C3 PE4 sing 294 n n C3 C4 PE4 sing 295 n n C3 H31 PE4 sing 296 n n C3 H32 PE4 sing 297 n n C4 O3 PE4 sing 298 n n C4 H41 PE4 sing 299 n n C4 H42 PE4 sing 300 n n O3 C5 PE4 sing 301 n n C5 C6 PE4 sing 302 n n C5 H51 PE4 sing 303 n n C5 H52 PE4 sing 304 n n C6 O4 PE4 sing 305 n n C6 H61 PE4 sing 306 n n C6 H62 PE4 sing 307 n n O4 C7 PE4 sing 308 n n C7 C8 PE4 sing 309 n n C7 H71 PE4 sing 310 n n C7 H72 PE4 sing 311 n n C8 O5 PE4 sing 312 n n C8 H81 PE4 sing 313 n n C8 H82 PE4 sing 314 n n O5 C9 PE4 sing 315 n n C9 C10 PE4 sing 316 n n C9 H91 PE4 sing 317 n n C9 H92 PE4 sing 318 n n C10 O6 PE4 sing 319 n n C10 H101 PE4 sing 320 n n C10 H102 PE4 sing 321 n n O6 C11 PE4 sing 322 n n C11 C12 PE4 sing 323 n n C11 H111 PE4 sing 324 n n C11 H112 PE4 sing 325 n n C12 O7 PE4 sing 326 n n C12 H121 PE4 sing 327 n n C12 H122 PE4 sing 328 n n O7 C13 PE4 sing 329 n n C13 C14 PE4 sing 330 n n C13 H131 PE4 sing 331 n n C13 H132 PE4 sing 332 n n C14 O8 PE4 sing 333 n n C14 H141 PE4 sing 334 n n C14 H142 PE4 sing 335 n n O8 C15 PE4 sing 336 n n C15 C16 PE4 sing 337 n n C15 H151 PE4 sing 338 n n C15 H152 PE4 sing 339 n n C16 H161 PE4 sing 340 n n C16 H162 PE4 sing 341 n n C16 H163 PE4 sing 342 n n # _atom_sites.entry_id 9EMY _atom_sites.fract_transf_matrix[1][1] 0.012136 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000004 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00822 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00662 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 AGS A 1 601 601 AGS AGS . N 5 PE4 A 1 602 602 PE4 PE4 . O 4 AGS B 1 601 601 AGS AGS . P 4 AGS G 1 601 601 AGS AGS . Q 4 AGS H 1 601 601 AGS AGS . R 6 HOH A 1 701 4 HOH HOH . S 6 HOH B 1 701 16 HOH HOH . S 6 HOH B 2 702 12 HOH HOH . S 6 HOH B 3 703 19 HOH HOH . S 6 HOH B 4 704 9 HOH HOH . T 6 HOH C 1 201 2 HOH HOH . U 6 HOH E 1 201 1 HOH HOH . V 6 HOH G 1 701 10 HOH HOH . V 6 HOH G 2 702 11 HOH HOH . W 6 HOH H 1 701 7 HOH HOH . W 6 HOH H 2 702 15 HOH HOH . W 6 HOH H 3 703 18 HOH HOH . W 6 HOH H 4 704 14 HOH HOH . W 6 HOH H 5 705 8 HOH HOH . W 6 HOH H 6 706 17 HOH HOH . X 6 HOH I 1 201 6 HOH HOH . X 6 HOH I 2 202 5 HOH HOH . Y 6 HOH L 1 201 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PE4 . . . N 5 10.76 25.787 20.498 1 121.32 ? O1 PE4 602 A 1 HETATM 2 C C1 PE4 . . . N 5 11.448 24.631 20.924 1 118.56 ? C1 PE4 602 A 1 HETATM 3 C C2 PE4 . . . N 5 11.342 24.424 22.399 1 113.06 ? C2 PE4 602 A 1 HETATM 4 O O2 PE4 . . . N 5 12.044 25.455 23.088 1 114.93 ? O2 PE4 602 A 1 HETATM 5 C C3 PE4 . . . N 5 12.157 25.214 24.49 1 120.71 ? C3 PE4 602 A 1 HETATM 6 C C4 PE4 . . . N 5 13.431 24.47 24.797 1 128.3 ? C4 PE4 602 A 1 HETATM 7 O O3 PE4 . . . N 5 13.411 23.913 26.114 1 134.68 ? O3 PE4 602 A 1 HETATM 8 C C5 PE4 . . . N 5 13.742 24.84 27.145 1 145.72 ? C5 PE4 602 A 1 HETATM 9 C C6 PE4 . . . N 5 15.084 25.471 26.874 1 155.52 ? C6 PE4 602 A 1 HETATM 10 O O4 PE4 . . . N 5 16.143 24.654 27.366 1 153.88 ? O4 PE4 602 A 1 HETATM 11 C C7 PE4 . . . N 5 16.186 24.598 28.787 1 148.24 ? C7 PE4 602 A 1 HETATM 12 C C8 PE4 . . . N 5 17.618 24.517 29.251 1 149.94 ? C8 PE4 602 A 1 HETATM 13 O O5 PE4 . . . N 5 18.174 25.823 29.402 1 150.41 ? O5 PE4 602 A 1 HETATM 14 C C9 PE4 . . . N 5 19.455 25.829 30.029 1 135.66 ? C9 PE4 602 A 1 HETATM 15 C C10 PE4 . . . N 5 19.329 25.454 31.476 1 129.23 ? C10 PE4 602 A 1 HETATM 16 O O6 PE4 . . . N 5 18.175 26.072 32.042 1 129.76 ? O6 PE4 602 A 1 HETATM 17 C C11 PE4 . . . N 5 17.278 25.167 32.692 1 132.68 ? C11 PE4 602 A 1 HETATM 18 C C12 PE4 . . . N 5 18.006 24.024 33.361 1 131.8 ? C12 PE4 602 A 1 HETATM 19 O O7 PE4 . . . N 5 17.999 24.174 34.778 1 126.96 ? O7 PE4 602 A 1 HETATM 20 C C13 PE4 . . . N 5 18.681 25.339 35.239 1 126.08 ? C13 PE4 602 A 1 HETATM 21 C C14 PE4 . . . N 5 20.027 24.984 35.8 1 122.18 ? C14 PE4 602 A 1 HETATM 22 O O8 PE4 . . . N 5 20.885 24.46 34.785 1 108.89 ? O8 PE4 602 A 1 HETATM 23 C C15 PE4 . . . N 5 22.272 24.585 35.097 1 103.07 ? C15 PE4 602 A 1 HETATM 24 C C16 PE4 . . . N 5 22.781 25.975 35.113 1 96.25 ? C16 PE4 602 A 1 # _model_server_stats.io_time_ms 222 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #