data_9EO5 # _model_server_result.job_id sVojYoJ_4x7F6Da3dSsMBg _model_server_result.datetime_utc '2025-01-10 16:54:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9eo5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 9EO5 # _exptl.entry_id 9EO5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PLATINUM (II) ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.463 _cell.angle_gamma 90 _cell.entry_id 9EO5 _cell.length_a 100.75 _cell.length_b 32.69 _cell.length_c 73.54 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,M 1 1 B,G,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 AAA CYS 26 1_555 A SG CYS 84 AAA CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf2 A SG CYS 40 AAA CYS 40 1_555 A SG CYS 95 AAA CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf3 A SG CYS 58 AAA CYS 58 1_555 A SG CYS 110 AAA CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 A SG CYS 65 AAA CYS 65 1_555 A SG CYS 72 AAA CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf5 B SG CYS 26 BBB CYS 26 1_555 B SG CYS 84 BBB CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf6 B SG CYS 40 BBB CYS 40 1_555 B SG CYS 95 BBB CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 B SG CYS 58 BBB CYS 58 1_555 B SG CYS 110 BBB CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf8 B SG CYS 65 BBB CYS 65 1_555 B SG CYS 72 BBB CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc1 A SD MET 29 AAA MET 29 1_555 F PT PT . AAA PT 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc2 A OD1 ASP 53 AAA ASP 53 1_555 E PT PT . AAA PT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc3 C N NH3 . AAA NH3 201 1_555 E PT PT . AAA PT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc4 D N NH3 . AAA NH3 202 1_555 F PT PT . AAA PT 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc5 E PT PT . AAA PT 203 1_555 M O HOH . AAA HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc6 F PT PT . AAA PT 204 1_555 M O HOH . AAA HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc7 F PT PT . AAA PT 204 1_555 M O HOH . AAA HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc8 B SD MET 29 BBB MET 29 1_555 L PT PT . BBB PT 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc9 B NE2 HIS 105 BBB HIS 105 1_555 K PT PT . BBB PT 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc10 B ND1 HIS 119 BBB HIS 119 1_555 J PT PT . BBB PT 204 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.254 ? metalc ? metalc11 B ND1 HIS 119 BBB HIS 119 1_555 J PT PT . BBB PT 204 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.302 ? metalc ? metalc12 G N NH3 . BBB NH3 201 1_555 J PT PT . BBB PT 204 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.342 ? metalc ? metalc13 G N NH3 . BBB NH3 201 1_555 J PT PT . BBB PT 204 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.291 ? metalc ? metalc14 H N NH3 . BBB NH3 202 1_555 L PT PT . BBB PT 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc15 I N NH3 . BBB NH3 203 1_555 K PT PT . BBB PT 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc16 J PT PT . BBB PT 204 1_555 N O HOH . BBB HOH 358 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.252 ? metalc ? metalc17 J PT PT . BBB PT 204 1_555 N O HOH . BBB HOH 358 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.248 ? # _chem_comp.formula 'Pt 2' _chem_comp.formula_weight 195.078 _chem_comp.id PT _chem_comp.mon_nstd_flag . _chem_comp.name 'PLATINUM (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9EO5 _atom_sites.fract_transf_matrix[1][1] 0.009926 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00008 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.03059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013598 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NH3 AAA 1 201 201 NH3 NH3 . D 2 NH3 AAA 1 202 202 NH3 NH3 . E 3 PT AAA 1 203 2 PT PT . F 3 PT AAA 1 204 4 PT PT . G 2 NH3 BBB 1 201 201 NH3 NH3 . H 2 NH3 BBB 1 202 202 NH3 NH3 . I 2 NH3 BBB 1 203 203 NH3 NH3 . J 3 PT BBB 1 204 1 PT PT . K 3 PT BBB 1 205 3 PT PT . L 3 PT BBB 1 206 5 PT PT . M 4 HOH AAA 1 301 96 HOH HOH . M 4 HOH AAA 2 302 24 HOH HOH . M 4 HOH AAA 3 303 169 HOH HOH . M 4 HOH AAA 4 304 117 HOH HOH . M 4 HOH AAA 5 305 83 HOH HOH . M 4 HOH AAA 6 306 152 HOH HOH . M 4 HOH AAA 7 307 142 HOH HOH . M 4 HOH AAA 8 308 149 HOH HOH . M 4 HOH AAA 9 309 46 HOH HOH . M 4 HOH AAA 10 310 144 HOH HOH . M 4 HOH AAA 11 311 98 HOH HOH . M 4 HOH AAA 12 312 119 HOH HOH . M 4 HOH AAA 13 313 134 HOH HOH . M 4 HOH AAA 14 314 34 HOH HOH . M 4 HOH AAA 15 315 194 HOH HOH . M 4 HOH AAA 16 316 186 HOH HOH . M 4 HOH AAA 17 317 22 HOH HOH . M 4 HOH AAA 18 318 42 HOH HOH . M 4 HOH AAA 19 319 74 HOH HOH . M 4 HOH AAA 20 320 27 HOH HOH . M 4 HOH AAA 21 321 107 HOH HOH . M 4 HOH AAA 22 322 14 HOH HOH . M 4 HOH AAA 23 323 124 HOH HOH . M 4 HOH AAA 24 324 31 HOH HOH . M 4 HOH AAA 25 325 43 HOH HOH . M 4 HOH AAA 26 326 126 HOH HOH . M 4 HOH AAA 27 327 188 HOH HOH . M 4 HOH AAA 28 328 35 HOH HOH . M 4 HOH AAA 29 329 53 HOH HOH . M 4 HOH AAA 30 330 12 HOH HOH . M 4 HOH AAA 31 331 143 HOH HOH . M 4 HOH AAA 32 332 9 HOH HOH . M 4 HOH AAA 33 333 18 HOH HOH . M 4 HOH AAA 34 334 8 HOH HOH . M 4 HOH AAA 35 335 195 HOH HOH . M 4 HOH AAA 36 336 6 HOH HOH . M 4 HOH AAA 37 337 30 HOH HOH . M 4 HOH AAA 38 338 201 HOH HOH . M 4 HOH AAA 39 339 85 HOH HOH . M 4 HOH AAA 40 340 49 HOH HOH . M 4 HOH AAA 41 341 21 HOH HOH . M 4 HOH AAA 42 342 20 HOH HOH . M 4 HOH AAA 43 343 28 HOH HOH . M 4 HOH AAA 44 344 183 HOH HOH . M 4 HOH AAA 45 345 39 HOH HOH . M 4 HOH AAA 46 346 5 HOH HOH . M 4 HOH AAA 47 347 104 HOH HOH . M 4 HOH AAA 48 348 13 HOH HOH . M 4 HOH AAA 49 349 54 HOH HOH . M 4 HOH AAA 50 350 174 HOH HOH . M 4 HOH AAA 51 351 133 HOH HOH . M 4 HOH AAA 52 352 91 HOH HOH . M 4 HOH AAA 53 353 200 HOH HOH . M 4 HOH AAA 54 354 44 HOH HOH . M 4 HOH AAA 55 355 23 HOH HOH . M 4 HOH AAA 56 356 157 HOH HOH . M 4 HOH AAA 57 357 29 HOH HOH . M 4 HOH AAA 58 358 75 HOH HOH . M 4 HOH AAA 59 359 40 HOH HOH . M 4 HOH AAA 60 360 69 HOH HOH . M 4 HOH AAA 61 361 62 HOH HOH . M 4 HOH AAA 62 362 17 HOH HOH . M 4 HOH AAA 63 363 110 HOH HOH . M 4 HOH AAA 64 364 193 HOH HOH . M 4 HOH AAA 65 365 101 HOH HOH . M 4 HOH AAA 66 366 131 HOH HOH . M 4 HOH AAA 67 367 51 HOH HOH . M 4 HOH AAA 68 368 99 HOH HOH . M 4 HOH AAA 69 369 93 HOH HOH . M 4 HOH AAA 70 370 97 HOH HOH . M 4 HOH AAA 71 371 41 HOH HOH . M 4 HOH AAA 72 372 182 HOH HOH . M 4 HOH AAA 73 373 153 HOH HOH . M 4 HOH AAA 74 374 166 HOH HOH . M 4 HOH AAA 75 375 26 HOH HOH . M 4 HOH AAA 76 376 45 HOH HOH . M 4 HOH AAA 77 377 70 HOH HOH . M 4 HOH AAA 78 378 167 HOH HOH . M 4 HOH AAA 79 379 58 HOH HOH . M 4 HOH AAA 80 380 105 HOH HOH . M 4 HOH AAA 81 381 177 HOH HOH . M 4 HOH AAA 82 382 63 HOH HOH . M 4 HOH AAA 83 383 4 HOH HOH . M 4 HOH AAA 84 384 52 HOH HOH . M 4 HOH AAA 85 385 139 HOH HOH . M 4 HOH AAA 86 386 122 HOH HOH . M 4 HOH AAA 87 387 148 HOH HOH . M 4 HOH AAA 88 388 57 HOH HOH . M 4 HOH AAA 89 389 19 HOH HOH . M 4 HOH AAA 90 390 33 HOH HOH . M 4 HOH AAA 91 391 130 HOH HOH . M 4 HOH AAA 92 392 76 HOH HOH . M 4 HOH AAA 93 393 94 HOH HOH . M 4 HOH AAA 94 394 156 HOH HOH . M 4 HOH AAA 95 395 175 HOH HOH . M 4 HOH AAA 96 396 106 HOH HOH . M 4 HOH AAA 97 397 150 HOH HOH . M 4 HOH AAA 98 398 102 HOH HOH . M 4 HOH AAA 99 399 103 HOH HOH . M 4 HOH AAA 100 400 184 HOH HOH . M 4 HOH AAA 101 401 47 HOH HOH . M 4 HOH AAA 102 402 60 HOH HOH . M 4 HOH AAA 103 403 123 HOH HOH . M 4 HOH AAA 104 404 132 HOH HOH . M 4 HOH AAA 105 405 189 HOH HOH . M 4 HOH AAA 106 406 160 HOH HOH . M 4 HOH AAA 107 407 207 HOH HOH . M 4 HOH AAA 108 408 145 HOH HOH . M 4 HOH AAA 109 409 197 HOH HOH . M 4 HOH AAA 110 410 66 HOH HOH . M 4 HOH AAA 111 411 181 HOH HOH . M 4 HOH AAA 112 412 138 HOH HOH . M 4 HOH AAA 113 413 82 HOH HOH . M 4 HOH AAA 114 414 146 HOH HOH . M 4 HOH AAA 115 415 168 HOH HOH . M 4 HOH AAA 116 416 204 HOH HOH . M 4 HOH AAA 117 417 37 HOH HOH . M 4 HOH AAA 118 418 141 HOH HOH . M 4 HOH AAA 119 419 140 HOH HOH . M 4 HOH AAA 120 420 118 HOH HOH . N 4 HOH BBB 1 301 55 HOH HOH . N 4 HOH BBB 2 302 163 HOH HOH . N 4 HOH BBB 3 303 2 HOH HOH . N 4 HOH BBB 4 304 187 HOH HOH . N 4 HOH BBB 5 305 15 HOH HOH . N 4 HOH BBB 6 306 86 HOH HOH . N 4 HOH BBB 7 307 179 HOH HOH . N 4 HOH BBB 8 308 111 HOH HOH . N 4 HOH BBB 9 309 185 HOH HOH . N 4 HOH BBB 10 310 100 HOH HOH . N 4 HOH BBB 11 311 32 HOH HOH . N 4 HOH BBB 12 312 72 HOH HOH . N 4 HOH BBB 13 313 109 HOH HOH . N 4 HOH BBB 14 314 173 HOH HOH . N 4 HOH BBB 15 315 79 HOH HOH . N 4 HOH BBB 16 316 38 HOH HOH . N 4 HOH BBB 17 317 56 HOH HOH . N 4 HOH BBB 18 318 165 HOH HOH . N 4 HOH BBB 19 319 36 HOH HOH . N 4 HOH BBB 20 320 137 HOH HOH . N 4 HOH BBB 21 321 191 HOH HOH . N 4 HOH BBB 22 322 108 HOH HOH . N 4 HOH BBB 23 323 202 HOH HOH . N 4 HOH BBB 24 324 128 HOH HOH . N 4 HOH BBB 25 325 87 HOH HOH . N 4 HOH BBB 26 326 84 HOH HOH . N 4 HOH BBB 27 327 198 HOH HOH . N 4 HOH BBB 28 328 205 HOH HOH . N 4 HOH BBB 29 329 11 HOH HOH . N 4 HOH BBB 30 330 48 HOH HOH . N 4 HOH BBB 31 331 68 HOH HOH . N 4 HOH BBB 32 332 127 HOH HOH . N 4 HOH BBB 33 333 115 HOH HOH . N 4 HOH BBB 34 334 64 HOH HOH . N 4 HOH BBB 35 335 151 HOH HOH . N 4 HOH BBB 36 336 77 HOH HOH . N 4 HOH BBB 37 337 7 HOH HOH . N 4 HOH BBB 38 338 113 HOH HOH . N 4 HOH BBB 39 339 3 HOH HOH . N 4 HOH BBB 40 340 95 HOH HOH . N 4 HOH BBB 41 341 16 HOH HOH . N 4 HOH BBB 42 342 203 HOH HOH . N 4 HOH BBB 43 343 147 HOH HOH . N 4 HOH BBB 44 344 135 HOH HOH . N 4 HOH BBB 45 345 161 HOH HOH . N 4 HOH BBB 46 346 90 HOH HOH . N 4 HOH BBB 47 347 67 HOH HOH . N 4 HOH BBB 48 348 25 HOH HOH . N 4 HOH BBB 49 349 172 HOH HOH . N 4 HOH BBB 50 350 136 HOH HOH . N 4 HOH BBB 51 351 180 HOH HOH . N 4 HOH BBB 52 352 10 HOH HOH . N 4 HOH BBB 53 353 50 HOH HOH . N 4 HOH BBB 54 354 80 HOH HOH . N 4 HOH BBB 55 355 65 HOH HOH . N 4 HOH BBB 56 356 78 HOH HOH . N 4 HOH BBB 57 357 199 HOH HOH . N 4 HOH BBB 58 358 196 HOH HOH . N 4 HOH BBB 59 359 206 HOH HOH . N 4 HOH BBB 60 360 59 HOH HOH . N 4 HOH BBB 61 361 116 HOH HOH . N 4 HOH BBB 62 362 162 HOH HOH . N 4 HOH BBB 63 363 171 HOH HOH . N 4 HOH BBB 64 364 164 HOH HOH . N 4 HOH BBB 65 365 114 HOH HOH . N 4 HOH BBB 66 366 192 HOH HOH . N 4 HOH BBB 67 367 61 HOH HOH . N 4 HOH BBB 68 368 176 HOH HOH . N 4 HOH BBB 69 369 190 HOH HOH . N 4 HOH BBB 70 370 92 HOH HOH . N 4 HOH BBB 71 371 170 HOH HOH . N 4 HOH BBB 72 372 121 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PT _atom_site.label_atom_id PT _atom_site.label_comp_id PT _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -13.725 _atom_site.Cartn_y 0.723 _atom_site.Cartn_z 16.967 _atom_site.occupancy 0.6 _atom_site.B_iso_or_equiv 53.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PT _atom_site.auth_comp_id PT _atom_site.auth_seq_id 204 _atom_site.auth_asym_id AAA _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #