data_9EP8
#
_model_server_result.job_id            JQPDgHUHxmxFXYkTE1Xm9w 
_model_server_result.datetime_utc      '2024-11-15 19:39:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9ep8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":502}' 
#
_entry.id    9EP8 
#
_exptl.entry_id    9EP8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.71 
_cell.angle_gamma         90 
_cell.entry_id            9EP8 
_cell.length_a            151.409 
_cell.length_b            134.292 
_cell.length_c            93.548 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9EP8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,J,K 1 1 
C,D,G,H,I,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 133 n n 
C1 C2 EDO sing 134 n n 
C1 H11 EDO sing 135 n n 
C1 H12 EDO sing 136 n n 
O1 HO1 EDO sing 137 n n 
C2 O2 EDO sing 138 n n 
C2 H21 EDO sing 139 n n 
C2 H22 EDO sing 140 n n 
O2 HO2 EDO sing 141 n n 
#
_atom_sites.entry_id                     9EP8 
_atom_sites.fract_transf_matrix[1][1]    0.006605 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002366 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007446 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011355 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 A1H6L A 1 501 1 A1H6L INX . 
F 2 A1H6L B 1 501 2 A1H6L INX . 
G 2 A1H6L C 1 501 3 A1H6L INX . 
H 2 A1H6L D 1 501 4 A1H6L INX . 
I 3 EDO D 1 502 1 EDO EDO . 
J 4 HOH A 1 601 37 HOH HOH . 
J 4 HOH A 2 602 40 HOH HOH . 
J 4 HOH A 3 603 1 HOH HOH . 
J 4 HOH A 4 604 42 HOH HOH . 
J 4 HOH A 5 605 11 HOH HOH . 
J 4 HOH A 6 606 72 HOH HOH . 
J 4 HOH A 7 607 2 HOH HOH . 
J 4 HOH A 8 608 17 HOH HOH . 
J 4 HOH A 9 609 6 HOH HOH . 
J 4 HOH A 10 610 34 HOH HOH . 
J 4 HOH A 11 611 22 HOH HOH . 
J 4 HOH A 12 612 10 HOH HOH . 
J 4 HOH A 13 613 14 HOH HOH . 
J 4 HOH A 14 614 67 HOH HOH . 
J 4 HOH A 15 615 16 HOH HOH . 
J 4 HOH A 16 616 62 HOH HOH . 
J 4 HOH A 17 617 60 HOH HOH . 
J 4 HOH A 18 618 71 HOH HOH . 
J 4 HOH A 19 619 64 HOH HOH . 
J 4 HOH A 20 620 50 HOH HOH . 
J 4 HOH A 21 621 32 HOH HOH . 
J 4 HOH A 22 622 3 HOH HOH . 
J 4 HOH A 23 623 51 HOH HOH . 
J 4 HOH A 24 624 55 HOH HOH . 
J 4 HOH A 25 625 75 HOH HOH . 
J 4 HOH A 26 626 57 HOH HOH . 
J 4 HOH A 27 627 41 HOH HOH . 
J 4 HOH A 28 628 77 HOH HOH . 
K 4 HOH B 1 601 19 HOH HOH . 
K 4 HOH B 2 602 46 HOH HOH . 
K 4 HOH B 3 603 53 HOH HOH . 
K 4 HOH B 4 604 20 HOH HOH . 
K 4 HOH B 5 605 47 HOH HOH . 
K 4 HOH B 6 606 12 HOH HOH . 
K 4 HOH B 7 607 5 HOH HOH . 
K 4 HOH B 8 608 13 HOH HOH . 
K 4 HOH B 9 609 29 HOH HOH . 
K 4 HOH B 10 610 45 HOH HOH . 
L 4 HOH C 1 601 68 HOH HOH . 
L 4 HOH C 2 602 44 HOH HOH . 
L 4 HOH C 3 603 31 HOH HOH . 
L 4 HOH C 4 604 23 HOH HOH . 
L 4 HOH C 5 605 8 HOH HOH . 
L 4 HOH C 6 606 9 HOH HOH . 
L 4 HOH C 7 607 28 HOH HOH . 
L 4 HOH C 8 608 76 HOH HOH . 
L 4 HOH C 9 609 73 HOH HOH . 
L 4 HOH C 10 610 27 HOH HOH . 
L 4 HOH C 11 611 49 HOH HOH . 
L 4 HOH C 12 612 79 HOH HOH . 
L 4 HOH C 13 613 59 HOH HOH . 
L 4 HOH C 14 614 48 HOH HOH . 
L 4 HOH C 15 615 63 HOH HOH . 
L 4 HOH C 16 616 74 HOH HOH . 
M 4 HOH D 1 601 21 HOH HOH . 
M 4 HOH D 2 602 33 HOH HOH . 
M 4 HOH D 3 603 35 HOH HOH . 
M 4 HOH D 4 604 24 HOH HOH . 
M 4 HOH D 5 605 4 HOH HOH . 
M 4 HOH D 6 606 26 HOH HOH . 
M 4 HOH D 7 607 30 HOH HOH . 
M 4 HOH D 8 608 66 HOH HOH . 
M 4 HOH D 9 609 18 HOH HOH . 
M 4 HOH D 10 610 61 HOH HOH . 
M 4 HOH D 11 611 25 HOH HOH . 
M 4 HOH D 12 612 65 HOH HOH . 
M 4 HOH D 13 613 15 HOH HOH . 
M 4 HOH D 14 614 58 HOH HOH . 
M 4 HOH D 15 615 36 HOH HOH . 
M 4 HOH D 16 616 54 HOH HOH . 
M 4 HOH D 17 617 39 HOH HOH . 
M 4 HOH D 18 618 69 HOH HOH . 
M 4 HOH D 19 619 43 HOH HOH . 
M 4 HOH D 20 620 56 HOH HOH . 
M 4 HOH D 21 621 78 HOH HOH . 
M 4 HOH D 22 622 52 HOH HOH . 
M 4 HOH D 23 623 70 HOH HOH . 
M 4 HOH D 24 624 7 HOH HOH . 
M 4 HOH D 25 625 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 3 -54.347 68.013 -17.199 1 87.16 ? C1 EDO 502 D 1 
HETATM 2 O O1 EDO . . . I 3 -54.122 67.53 -18.527 1 78.5 ? O1 EDO 502 D 1 
HETATM 3 C C2 EDO . . . I 3 -54.658 69.503 -17.28 1 104.4 ? C2 EDO 502 D 1 
HETATM 4 O O2 EDO . . . I 3 -55.962 69.758 -17.823 1 101.26 ? O2 EDO 502 D 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           643 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           4 
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