data_9EPX # _model_server_result.job_id WGWOQytiOB3QCEVJvJIucQ _model_server_result.datetime_utc '2024-10-16 23:24:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9epx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":407}' # _entry.id 9EPX # _exptl.entry_id 9EPX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9EPX _cell.length_a 128.158 _cell.length_b 128.158 _cell.length_c 124.014 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EPX _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,V 1 1 B,K,L,M,N,O,P,Q,R,S,T,U,W 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 152 n n C1 C2 EDO sing 153 n n C1 H11 EDO sing 154 n n C1 H12 EDO sing 155 n n O1 HO1 EDO sing 156 n n C2 O2 EDO sing 157 n n C2 H21 EDO sing 158 n n C2 H22 EDO sing 159 n n O2 HO2 EDO sing 160 n n # _atom_sites.entry_id 9EPX _atom_sites.fract_transf_matrix[1][1] 0.007803 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007803 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008064 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 2 SO4 SO4 . D 2 SO4 A 1 402 3 SO4 SO4 . E 2 SO4 A 1 403 5 SO4 SO4 . F 2 SO4 A 1 404 7 SO4 SO4 . G 2 SO4 A 1 405 730 SO4 SO4 . H 2 SO4 A 1 406 731 SO4 SO4 . I 3 EDO A 1 407 733 EDO EDO . J 4 A1H6E A 1 408 734 A1H6E 331 . K 2 SO4 B 1 401 1 SO4 SO4 . L 2 SO4 B 1 402 4 SO4 SO4 . M 2 SO4 B 1 403 6 SO4 SO4 . N 2 SO4 B 1 404 8 SO4 SO4 . O 2 SO4 B 1 405 9 SO4 SO4 . P 2 SO4 B 1 406 10 SO4 SO4 . Q 2 SO4 B 1 407 14 SO4 SO4 . R 2 SO4 B 1 408 16 SO4 SO4 . S 2 SO4 B 1 409 340 SO4 SO4 . T 2 SO4 B 1 410 341 SO4 SO4 . U 4 A1H6E B 1 411 344 A1H6E 331 . V 5 HOH A 1 501 150 HOH HOH . V 5 HOH A 2 502 146 HOH HOH . V 5 HOH A 3 503 8 HOH HOH . V 5 HOH A 4 504 144 HOH HOH . V 5 HOH A 5 505 14 HOH HOH . V 5 HOH A 6 506 11 HOH HOH . V 5 HOH A 7 507 34 HOH HOH . V 5 HOH A 8 508 38 HOH HOH . V 5 HOH A 9 509 157 HOH HOH . V 5 HOH A 10 510 61 HOH HOH . V 5 HOH A 11 511 10 HOH HOH . V 5 HOH A 12 512 15 HOH HOH . V 5 HOH A 13 513 140 HOH HOH . V 5 HOH A 14 514 21 HOH HOH . V 5 HOH A 15 515 159 HOH HOH . V 5 HOH A 16 516 33 HOH HOH . V 5 HOH A 17 517 148 HOH HOH . V 5 HOH A 18 518 24 HOH HOH . V 5 HOH A 19 519 59 HOH HOH . V 5 HOH A 20 520 18 HOH HOH . V 5 HOH A 21 521 19 HOH HOH . V 5 HOH A 22 522 135 HOH HOH . V 5 HOH A 23 523 151 HOH HOH . V 5 HOH A 24 524 136 HOH HOH . V 5 HOH A 25 525 139 HOH HOH . V 5 HOH A 26 526 12 HOH HOH . V 5 HOH A 27 527 29 HOH HOH . V 5 HOH A 28 528 26 HOH HOH . V 5 HOH A 29 529 5 HOH HOH . V 5 HOH A 30 530 49 HOH HOH . V 5 HOH A 31 531 153 HOH HOH . W 5 HOH B 1 501 145 HOH HOH . W 5 HOH B 2 502 134 HOH HOH . W 5 HOH B 3 503 82 HOH HOH . W 5 HOH B 4 504 6 HOH HOH . W 5 HOH B 5 505 137 HOH HOH . W 5 HOH B 6 506 161 HOH HOH . W 5 HOH B 7 507 154 HOH HOH . W 5 HOH B 8 508 147 HOH HOH . W 5 HOH B 9 509 3 HOH HOH . W 5 HOH B 10 510 25 HOH HOH . W 5 HOH B 11 511 73 HOH HOH . W 5 HOH B 12 512 23 HOH HOH . W 5 HOH B 13 513 142 HOH HOH . W 5 HOH B 14 514 28 HOH HOH . W 5 HOH B 15 515 42 HOH HOH . W 5 HOH B 16 516 138 HOH HOH . W 5 HOH B 17 517 162 HOH HOH . W 5 HOH B 18 518 149 HOH HOH . W 5 HOH B 19 519 141 HOH HOH . W 5 HOH B 20 520 16 HOH HOH . W 5 HOH B 21 521 7 HOH HOH . W 5 HOH B 22 522 152 HOH HOH . W 5 HOH B 23 523 160 HOH HOH . W 5 HOH B 24 524 17 HOH HOH . W 5 HOH B 25 525 39 HOH HOH . W 5 HOH B 26 526 20 HOH HOH . W 5 HOH B 27 527 32 HOH HOH . W 5 HOH B 28 528 2 HOH HOH . W 5 HOH B 29 529 45 HOH HOH . W 5 HOH B 30 530 143 HOH HOH . W 5 HOH B 31 531 120 HOH HOH . W 5 HOH B 32 532 158 HOH HOH . W 5 HOH B 33 533 81 HOH HOH . W 5 HOH B 34 534 164 HOH HOH . W 5 HOH B 35 535 163 HOH HOH . W 5 HOH B 36 536 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 3 -3.863 -33.784 12.679 1 68.4 ? C1 EDO 407 A 1 HETATM 2 O O1 EDO . . . I 3 -4.068 -34.417 13.919 1 62.84 ? O1 EDO 407 A 1 HETATM 3 C C2 EDO . . . I 3 -3.64 -32.32 12.847 1 72.78 ? C2 EDO 407 A 1 HETATM 4 O O2 EDO . . . I 3 -2.859 -31.768 11.812 1 68.75 ? O2 EDO 407 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #