data_9EPY
#
_model_server_result.job_id            1F37S1VBrcA8_mGzztNkcA 
_model_server_result.datetime_utc      '2024-11-22 06:44:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9epy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":409}' 
#
_entry.id    9EPY 
#
_exptl.entry_id    9EPY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              552.15 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-[(2-methyl-1,3-benzothiazol-6-yl)sulfonyl]-7-azaspiro[3.5]nonan-2-amine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9EPY 
_cell.length_a            126.645 
_cell.length_b            126.645 
_cell.length_c            124.25 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9EPY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,X 1 1 
B,N,O,P,Q,R,S,T,U,V,W,Y 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 K N N 
? 4 V N N 
#
_chem_comp.formula           'C29 H30 Cl N3 O2 S2' 
_chem_comp.formula_weight    552.15 
_chem_comp.id                A1H6G 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-[(2-methyl-1,3-benzothiazol-6-yl)sulfonyl]-7-azaspiro[3.5]nonan-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C19 C18 A1H6G sing 1 n n 
C18 S17 A1H6G sing 2 n y 
C18 N20 A1H6G doub 3 n y 
S17 C16 A1H6G sing 4 n y 
N20 C21 A1H6G sing 5 n y 
C16 C21 A1H6G doub 6 n y 
C16 C15 A1H6G sing 7 n y 
C21 C22 A1H6G sing 8 n y 
C15 C14 A1H6G doub 9 n y 
C22 C23 A1H6G doub 10 n y 
C14 C23 A1H6G sing 11 n y 
C14 S13 A1H6G sing 12 n n 
O25 S13 A1H6G doub 13 n n 
S13 N12 A1H6G sing 14 n n 
S13 O24 A1H6G doub 15 n n 
C11 N12 A1H6G sing 16 n n 
C11 C10 A1H6G sing 17 n n 
C28 C7 A1H6G sing 18 n n 
C28 C9 A1H6G sing 19 n n 
N12 C26 A1H6G sing 20 n n 
C26 C27 A1H6G sing 21 n n 
C10 C9 A1H6G sing 22 n n 
C30 C29 A1H6G doub 23 n y 
C30 C31 A1H6G sing 24 n y 
C36 C37 A1H6G doub 25 n y 
C36 C35 A1H6G sing 26 n y 
C29 C4 A1H6G sing 27 n y 
C7 N6 A1H6G sing 28 n n 
C7 C8 A1H6G sing 29 n n 
N6 C5 A1H6G sing 30 n n 
C37 C32 A1H6G sing 31 n y 
C35 C34 A1H6G doub 32 n y 
C9 C27 A1H6G sing 33 n n 
C9 C8 A1H6G sing 34 n n 
C32 C31 A1H6G sing 35 n n 
C32 C33 A1H6G doub 36 n y 
C34 C33 A1H6G sing 37 n y 
C31 C2 A1H6G doub 38 n y 
C4 C5 A1H6G sing 39 n n 
C4 C3 A1H6G doub 40 n y 
C2 C3 A1H6G sing 41 n y 
C2 CL1 A1H6G sing 42 n n 
C3 H1 A1H6G sing 43 n n 
C5 H2 A1H6G sing 44 n n 
C5 H3 A1H6G sing 45 n n 
C7 H4 A1H6G sing 46 n n 
C8 H5 A1H6G sing 47 n n 
C8 H6 A1H6G sing 48 n n 
C10 H7 A1H6G sing 49 n n 
C10 H8 A1H6G sing 50 n n 
C11 H9 A1H6G sing 51 n n 
C11 H10 A1H6G sing 52 n n 
C15 H11 A1H6G sing 53 n n 
C19 H12 A1H6G sing 54 n n 
C19 H13 A1H6G sing 55 n n 
C19 H14 A1H6G sing 56 n n 
C22 H15 A1H6G sing 57 n n 
C23 H16 A1H6G sing 58 n n 
N6 H17 A1H6G sing 59 n n 
C26 H19 A1H6G sing 60 n n 
C26 H20 A1H6G sing 61 n n 
C27 H21 A1H6G sing 62 n n 
C27 H22 A1H6G sing 63 n n 
C28 H23 A1H6G sing 64 n n 
C28 H24 A1H6G sing 65 n n 
C29 H25 A1H6G sing 66 n n 
C30 H26 A1H6G sing 67 n n 
C33 H27 A1H6G sing 68 n n 
C34 H28 A1H6G sing 69 n n 
C35 H29 A1H6G sing 70 n n 
C36 H30 A1H6G sing 71 n n 
C37 H31 A1H6G sing 72 n n 
#
_atom_sites.entry_id                     9EPY 
_atom_sites.fract_transf_matrix[1][1]    0.007896 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007896 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008048 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 401 3 SO4 SO4 . 
D 2 SO4 A 1 402 5 SO4 SO4 . 
E 2 SO4 A 1 403 7 SO4 SO4 . 
F 2 SO4 A 1 404 15 SO4 SO4 . 
G 2 SO4 A 1 405 16 SO4 SO4 . 
H 2 SO4 A 1 406 410 SO4 SO4 . 
I 2 SO4 A 1 407 411 SO4 SO4 . 
J 3 EDO A 1 408 413 EDO EDO . 
K 4 A1H6G A 1 409 414 A1H6G 330 . 
L 2 SO4 A 1 410 1 SO4 SO4 . 
M 2 SO4 A 1 411 3 SO4 SO4 . 
N 2 SO4 B 1 401 4 SO4 SO4 . 
O 2 SO4 B 1 402 6 SO4 SO4 . 
P 2 SO4 B 1 403 8 SO4 SO4 . 
Q 2 SO4 B 1 404 10 SO4 SO4 . 
R 2 SO4 B 1 405 14 SO4 SO4 . 
S 2 SO4 B 1 406 20 SO4 SO4 . 
T 2 SO4 B 1 407 21 SO4 SO4 . 
U 3 EDO B 1 408 23 EDO EDO . 
V 4 A1H6G B 1 409 24 A1H6G 330 . 
W 2 SO4 B 1 410 2 SO4 SO4 . 
X 5 HOH A 1 501 31 HOH HOH . 
X 5 HOH A 2 502 35 HOH HOH . 
X 5 HOH A 3 503 38 HOH HOH . 
X 5 HOH A 4 504 28 HOH HOH . 
X 5 HOH A 5 505 27 HOH HOH . 
X 5 HOH A 6 506 34 HOH HOH . 
X 5 HOH A 7 507 25 HOH HOH . 
X 5 HOH A 8 508 41 HOH HOH . 
Y 5 HOH B 1 501 33 HOH HOH . 
Y 5 HOH B 2 502 37 HOH HOH . 
Y 5 HOH B 3 503 30 HOH HOH . 
Y 5 HOH B 4 504 26 HOH HOH . 
Y 5 HOH B 5 505 42 HOH HOH . 
Y 5 HOH B 6 506 32 HOH HOH . 
Y 5 HOH B 7 507 36 HOH HOH . 
Y 5 HOH B 8 508 39 HOH HOH . 
Y 5 HOH B 9 509 23 HOH HOH . 
Y 5 HOH B 10 510 24 HOH HOH . 
Y 5 HOH B 11 511 29 HOH HOH . 
Y 5 HOH B 12 512 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 A1H6G . . . V 4 3.513 37.754 32.415 1 118.83 ? C2 A1H6G 409 B 1 
HETATM 2 C C3 A1H6G . . . V 4 2.57 38.76 32.522 1 115.54 ? C3 A1H6G 409 B 1 
HETATM 3 C C4 A1H6G . . . V 4 2.139 39.442 31.392 1 100.73 ? C4 A1H6G 409 B 1 
HETATM 4 C C5 A1H6G . . . V 4 1.067 40.495 31.492 1 91.48 ? C5 A1H6G 409 B 1 
HETATM 5 C C7 A1H6G . . . V 4 0.29 42.642 30.205 1 77.48 ? C7 A1H6G 409 B 1 
HETATM 6 C C8 A1H6G . . . V 4 -0.402 43.168 31.426 1 77.5 ? C8 A1H6G 409 B 1 
HETATM 7 C C9 A1H6G . . . V 4 -1.383 43.838 30.437 1 74.98 ? C9 A1H6G 409 B 1 
HETATM 8 C C10 A1H6G . . . V 4 -0.999 45.265 30.011 1 67.88 ? C10 A1H6G 409 B 1 
HETATM 9 C C11 A1H6G . . . V 4 -1.985 45.831 29.006 1 66.86 ? C11 A1H6G 409 B 1 
HETATM 10 C C14 A1H6G . . . V 4 -5.161 46.079 27.535 1 70.92 ? C14 A1H6G 409 B 1 
HETATM 11 C C15 A1H6G . . . V 4 -4.55 46.322 26.308 1 64.6 ? C15 A1H6G 409 B 1 
HETATM 12 C C16 A1H6G . . . V 4 -5.106 45.752 25.172 1 64.87 ? C16 A1H6G 409 B 1 
HETATM 13 C C18 A1H6G . . . V 4 -5.948 44.894 23.043 1 62.7 ? C18 A1H6G 409 B 1 
HETATM 14 C C19 A1H6G . . . V 4 -6.197 44.618 21.609 1 63.13 ? C19 A1H6G 409 B 1 
HETATM 15 C C21 A1H6G . . . V 4 -6.252 44.955 25.239 1 66.13 ? C21 A1H6G 409 B 1 
HETATM 16 C C22 A1H6G . . . V 4 -6.846 44.723 26.482 1 69.66 ? C22 A1H6G 409 B 1 
HETATM 17 C C23 A1H6G . . . V 4 -6.301 45.284 27.631 1 67.93 ? C23 A1H6G 409 B 1 
HETATM 18 CL CL1 A1H6G . . . V 4 4.118 37.047 33.879 1 136.26 ? CL1 A1H6G 409 B 1 
HETATM 19 N N6 A1H6G . . . V 4 0.983 41.308 30.239 1 79.67 1 N6 A1H6G 409 B 1 
HETATM 20 N N12 A1H6G . . . V 4 -3.343 45.801 29.583 1 73.72 ? N12 A1H6G 409 B 1 
HETATM 21 S S13 A1H6G . . . V 4 -4.492 46.819 28.986 1 81.08 ? S13 A1H6G 409 B 1 
HETATM 22 S S17 A1H6G . . . V 4 -4.6 45.896 23.516 1 65.4 ? S17 A1H6G 409 B 1 
HETATM 23 N N20 A1H6G . . . V 4 -6.711 44.477 24.004 1 62.34 ? N20 A1H6G 409 B 1 
HETATM 24 O O24 A1H6G . . . V 4 -5.537 46.869 29.961 1 78.14 ? O24 A1H6G 409 B 1 
HETATM 25 O O25 A1H6G . . . V 4 -3.821 48.022 28.602 1 68.54 ? O25 A1H6G 409 B 1 
HETATM 26 C C26 A1H6G . . . V 4 -3.773 44.425 29.89 1 69.43 ? C26 A1H6G 409 B 1 
HETATM 27 C C27 A1H6G . . . V 4 -2.843 43.818 30.921 1 68.25 ? C27 A1H6G 409 B 1 
HETATM 28 C C28 A1H6G . . . V 4 -1.018 42.739 29.421 1 73.59 ? C28 A1H6G 409 B 1 
HETATM 29 C C29 A1H6G . . . V 4 2.679 39.082 30.164 1 96.85 ? C29 A1H6G 409 B 1 
HETATM 30 C C30 A1H6G . . . V 4 3.618 38.072 30.059 1 91.92 ? C30 A1H6G 409 B 1 
HETATM 31 C C31 A1H6G . . . V 4 4.048 37.376 31.184 1 102.76 ? C31 A1H6G 409 B 1 
HETATM 32 C C32 A1H6G . . . V 4 4.88 36.161 30.969 1 106.32 ? C32 A1H6G 409 B 1 
HETATM 33 C C33 A1H6G . . . V 4 4.377 34.894 31.267 1 107.17 ? C33 A1H6G 409 B 1 
HETATM 34 C C34 A1H6G . . . V 4 5.117 33.756 30.988 1 113.77 ? C34 A1H6G 409 B 1 
HETATM 35 C C35 A1H6G . . . V 4 6.367 33.861 30.411 1 119.7 ? C35 A1H6G 409 B 1 
HETATM 36 C C36 A1H6G . . . V 4 6.879 35.107 30.11 1 121.35 ? C36 A1H6G 409 B 1 
HETATM 37 C C37 A1H6G . . . V 4 6.145 36.25 30.386 1 118.78 ? C37 A1H6G 409 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           37 
#