data_9EQH
#
_model_server_result.job_id            QZX1E2kgOatNUgsYypyjCg 
_model_server_result.datetime_utc      '2024-10-16 23:37:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9eqh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":901}' 
#
_entry.id    9EQH 
#
_exptl.entry_id    9EQH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9EQH 
_cell.length_a            44.009 
_cell.length_b            90.27 
_cell.length_c            111.177 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9EQH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ARG 131 A ARG 549 1_555 D NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
metalc ? metalc2 A OE2 GLU 133 A GLU 551 1_555 D NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? 
metalc ? metalc3 A OH TYR 321 A TYR 739 1_555 D NA NA . A NA 903 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 3.022 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     9EQH 
_atom_sites.fract_transf_matrix[1][1]    0.022723 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011078 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008995 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 901 919 GOL GOL . 
C 2 GOL A 1 902 920 GOL GOL . 
D 3 NA A 1 903 1 NA NA . 
E 4 HOH A 1 1001 95 HOH HOH . 
E 4 HOH A 2 1002 89 HOH HOH . 
E 4 HOH A 3 1003 48 HOH HOH . 
E 4 HOH A 4 1004 71 HOH HOH . 
E 4 HOH A 5 1005 3 HOH HOH . 
E 4 HOH A 6 1006 72 HOH HOH . 
E 4 HOH A 7 1007 24 HOH HOH . 
E 4 HOH A 8 1008 105 HOH HOH . 
E 4 HOH A 9 1009 9 HOH HOH . 
E 4 HOH A 10 1010 88 HOH HOH . 
E 4 HOH A 11 1011 18 HOH HOH . 
E 4 HOH A 12 1012 52 HOH HOH . 
E 4 HOH A 13 1013 42 HOH HOH . 
E 4 HOH A 14 1014 26 HOH HOH . 
E 4 HOH A 15 1015 61 HOH HOH . 
E 4 HOH A 16 1016 87 HOH HOH . 
E 4 HOH A 17 1017 66 HOH HOH . 
E 4 HOH A 18 1018 49 HOH HOH . 
E 4 HOH A 19 1019 99 HOH HOH . 
E 4 HOH A 20 1020 82 HOH HOH . 
E 4 HOH A 21 1021 33 HOH HOH . 
E 4 HOH A 22 1022 40 HOH HOH . 
E 4 HOH A 23 1023 4 HOH HOH . 
E 4 HOH A 24 1024 21 HOH HOH . 
E 4 HOH A 25 1025 32 HOH HOH . 
E 4 HOH A 26 1026 7 HOH HOH . 
E 4 HOH A 27 1027 55 HOH HOH . 
E 4 HOH A 28 1028 20 HOH HOH . 
E 4 HOH A 29 1029 17 HOH HOH . 
E 4 HOH A 30 1030 64 HOH HOH . 
E 4 HOH A 31 1031 44 HOH HOH . 
E 4 HOH A 32 1032 34 HOH HOH . 
E 4 HOH A 33 1033 46 HOH HOH . 
E 4 HOH A 34 1034 39 HOH HOH . 
E 4 HOH A 35 1035 79 HOH HOH . 
E 4 HOH A 36 1036 28 HOH HOH . 
E 4 HOH A 37 1037 5 HOH HOH . 
E 4 HOH A 38 1038 10 HOH HOH . 
E 4 HOH A 39 1039 60 HOH HOH . 
E 4 HOH A 40 1040 13 HOH HOH . 
E 4 HOH A 41 1041 57 HOH HOH . 
E 4 HOH A 42 1042 81 HOH HOH . 
E 4 HOH A 43 1043 67 HOH HOH . 
E 4 HOH A 44 1044 103 HOH HOH . 
E 4 HOH A 45 1045 35 HOH HOH . 
E 4 HOH A 46 1046 1 HOH HOH . 
E 4 HOH A 47 1047 50 HOH HOH . 
E 4 HOH A 48 1048 8 HOH HOH . 
E 4 HOH A 49 1049 70 HOH HOH . 
E 4 HOH A 50 1050 75 HOH HOH . 
E 4 HOH A 51 1051 36 HOH HOH . 
E 4 HOH A 52 1052 23 HOH HOH . 
E 4 HOH A 53 1053 51 HOH HOH . 
E 4 HOH A 54 1054 37 HOH HOH . 
E 4 HOH A 55 1055 30 HOH HOH . 
E 4 HOH A 56 1056 38 HOH HOH . 
E 4 HOH A 57 1057 59 HOH HOH . 
E 4 HOH A 58 1058 84 HOH HOH . 
E 4 HOH A 59 1059 25 HOH HOH . 
E 4 HOH A 60 1060 15 HOH HOH . 
E 4 HOH A 61 1061 77 HOH HOH . 
E 4 HOH A 62 1062 31 HOH HOH . 
E 4 HOH A 63 1063 19 HOH HOH . 
E 4 HOH A 64 1064 47 HOH HOH . 
E 4 HOH A 65 1065 6 HOH HOH . 
E 4 HOH A 66 1066 22 HOH HOH . 
E 4 HOH A 67 1067 74 HOH HOH . 
E 4 HOH A 68 1068 78 HOH HOH . 
E 4 HOH A 69 1069 80 HOH HOH . 
E 4 HOH A 70 1070 43 HOH HOH . 
E 4 HOH A 71 1071 76 HOH HOH . 
E 4 HOH A 72 1072 100 HOH HOH . 
E 4 HOH A 73 1073 93 HOH HOH . 
E 4 HOH A 74 1074 11 HOH HOH . 
E 4 HOH A 75 1075 14 HOH HOH . 
E 4 HOH A 76 1076 27 HOH HOH . 
E 4 HOH A 77 1077 73 HOH HOH . 
E 4 HOH A 78 1078 2 HOH HOH . 
E 4 HOH A 79 1079 97 HOH HOH . 
E 4 HOH A 80 1080 62 HOH HOH . 
E 4 HOH A 81 1081 69 HOH HOH . 
E 4 HOH A 82 1082 45 HOH HOH . 
E 4 HOH A 83 1083 41 HOH HOH . 
E 4 HOH A 84 1084 53 HOH HOH . 
E 4 HOH A 85 1085 58 HOH HOH . 
E 4 HOH A 86 1086 94 HOH HOH . 
E 4 HOH A 87 1087 101 HOH HOH . 
E 4 HOH A 88 1088 98 HOH HOH . 
E 4 HOH A 89 1089 16 HOH HOH . 
E 4 HOH A 90 1090 92 HOH HOH . 
E 4 HOH A 91 1091 68 HOH HOH . 
E 4 HOH A 92 1092 96 HOH HOH . 
E 4 HOH A 93 1093 65 HOH HOH . 
E 4 HOH A 94 1094 104 HOH HOH . 
E 4 HOH A 95 1095 91 HOH HOH . 
E 4 HOH A 96 1096 86 HOH HOH . 
E 4 HOH A 97 1097 12 HOH HOH . 
E 4 HOH A 98 1098 90 HOH HOH . 
E 4 HOH A 99 1099 63 HOH HOH . 
E 4 HOH A 100 1100 29 HOH HOH . 
E 4 HOH A 101 1101 85 HOH HOH . 
E 4 HOH A 102 1102 54 HOH HOH . 
E 4 HOH A 103 1103 102 HOH HOH . 
E 4 HOH A 104 1104 83 HOH HOH . 
E 4 HOH A 105 1105 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 6.116 -23.948 -21.651 1 61.92 ? C1 GOL 901 A 1 
HETATM 2 O O1 GOL . . . B 2 5.962 -23.097 -22.785 1 75.67 ? O1 GOL 901 A 1 
HETATM 3 C C2 GOL . . . B 2 5.671 -25.365 -21.98 1 73.4 ? C2 GOL 901 A 1 
HETATM 4 O O2 GOL . . . B 2 6.597 -26.292 -21.398 1 58.06 ? O2 GOL 901 A 1 
HETATM 5 C C3 GOL . . . B 2 4.217 -25.641 -21.617 1 79.85 ? C3 GOL 901 A 1 
HETATM 6 O O3 GOL . . . B 2 3.944 -27.026 -21.406 1 87.49 ? O3 GOL 901 A 1 
HETATM 7 H H11 GOL . . . B 2 5.592 -23.59 -20.898 1 67.54 ? H11 GOL 901 A 1 
HETATM 8 H H12 GOL . . . B 2 7.068 -23.959 -21.385 1 67.28 ? H12 GOL 901 A 1 
HETATM 9 H HO1 GOL . . . B 2 6.216 -22.305 -22.537 0 73.99 ? HO1 GOL 901 A 1 
HETATM 10 H H2 GOL . . . B 2 5.741 -25.47 -22.959 1 69.08 ? H2 GOL 901 A 1 
HETATM 11 H HO2 GOL . . . B 2 6.598 -26.166 -20.544 0 58.47 ? HO2 GOL 901 A 1 
HETATM 12 H H31 GOL . . . B 2 3.641 -25.312 -22.349 1 80.01 ? H31 GOL 901 A 1 
HETATM 13 H H32 GOL . . . B 2 3.978 -25.147 -20.801 1 79.66 ? H32 GOL 901 A 1 
HETATM 14 H HO3 GOL . . . B 2 3.109 -27.075 -21.229 0 84.05 ? HO3 GOL 901 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#