data_9EQN # _model_server_result.job_id 8dR5yXVMgccvKNMxnNAThQ _model_server_result.datetime_utc '2024-10-10 14:20:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9eqn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":100}' # _entry.id 9EQN # _exptl.entry_id 9EQN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.1 _cell.angle_gamma 90 _cell.entry_id 9EQN _cell.length_a 48.67 _cell.length_b 55.761 _cell.length_c 52.894 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EQN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 124 n n C1 C2 GOL sing 125 n n C1 H11 GOL sing 126 n n C1 H12 GOL sing 127 n n O1 HO1 GOL sing 128 n n C2 O2 GOL sing 129 n n C2 C3 GOL sing 130 n n C2 H2 GOL sing 131 n n O2 HO2 GOL sing 132 n n C3 O3 GOL sing 133 n n C3 H31 GOL sing 134 n n C3 H32 GOL sing 135 n n O3 HO3 GOL sing 136 n n # _atom_sites.entry_id 9EQN _atom_sites.fract_transf_matrix[1][1] 0.020547 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007521 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017934 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020132 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EOH C 1 101 101 EOH ACE . F 3 GOL D 1 100 100 GOL GOL . G 4 HOH A 1 101 68 HOH HOH . G 4 HOH A 2 102 136 HOH HOH . G 4 HOH A 3 103 90 HOH HOH . G 4 HOH A 4 104 102 HOH HOH . G 4 HOH A 5 105 93 HOH HOH . G 4 HOH A 6 106 160 HOH HOH . G 4 HOH A 7 107 76 HOH HOH . G 4 HOH A 8 108 29 HOH HOH . G 4 HOH A 9 109 8 HOH HOH . G 4 HOH A 10 110 85 HOH HOH . G 4 HOH A 11 111 185 HOH HOH . G 4 HOH A 12 112 145 HOH HOH . G 4 HOH A 13 113 200 HOH HOH . G 4 HOH A 14 114 13 HOH HOH . G 4 HOH A 15 115 134 HOH HOH . G 4 HOH A 16 116 59 HOH HOH . G 4 HOH A 17 117 32 HOH HOH . G 4 HOH A 18 118 55 HOH HOH . G 4 HOH A 19 119 82 HOH HOH . G 4 HOH A 20 120 40 HOH HOH . G 4 HOH A 21 121 42 HOH HOH . G 4 HOH A 22 122 83 HOH HOH . G 4 HOH A 23 123 166 HOH HOH . G 4 HOH A 24 124 169 HOH HOH . G 4 HOH A 25 125 9 HOH HOH . G 4 HOH A 26 126 163 HOH HOH . G 4 HOH A 27 127 25 HOH HOH . G 4 HOH A 28 128 64 HOH HOH . G 4 HOH A 29 129 184 HOH HOH . G 4 HOH A 30 130 78 HOH HOH . G 4 HOH A 31 131 105 HOH HOH . G 4 HOH A 32 132 153 HOH HOH . G 4 HOH A 33 133 217 HOH HOH . G 4 HOH A 34 134 100 HOH HOH . G 4 HOH A 35 135 150 HOH HOH . G 4 HOH A 36 136 172 HOH HOH . G 4 HOH A 37 137 142 HOH HOH . G 4 HOH A 38 138 215 HOH HOH . G 4 HOH A 39 139 152 HOH HOH . G 4 HOH A 40 140 206 HOH HOH . G 4 HOH A 41 141 148 HOH HOH . G 4 HOH A 42 142 201 HOH HOH . G 4 HOH A 43 143 228 HOH HOH . G 4 HOH A 44 144 106 HOH HOH . G 4 HOH A 45 145 133 HOH HOH . G 4 HOH A 46 146 187 HOH HOH . G 4 HOH A 47 147 227 HOH HOH . H 4 HOH B 1 101 202 HOH HOH . H 4 HOH B 2 102 71 HOH HOH . H 4 HOH B 3 103 125 HOH HOH . H 4 HOH B 4 104 118 HOH HOH . H 4 HOH B 5 105 120 HOH HOH . H 4 HOH B 6 106 4 HOH HOH . H 4 HOH B 7 107 23 HOH HOH . H 4 HOH B 8 108 65 HOH HOH . H 4 HOH B 9 109 30 HOH HOH . H 4 HOH B 10 110 21 HOH HOH . H 4 HOH B 11 111 165 HOH HOH . H 4 HOH B 12 112 19 HOH HOH . H 4 HOH B 13 113 147 HOH HOH . H 4 HOH B 14 114 110 HOH HOH . H 4 HOH B 15 115 91 HOH HOH . H 4 HOH B 16 116 6 HOH HOH . H 4 HOH B 17 117 231 HOH HOH . H 4 HOH B 18 118 97 HOH HOH . H 4 HOH B 19 119 114 HOH HOH . H 4 HOH B 20 120 58 HOH HOH . H 4 HOH B 21 121 80 HOH HOH . H 4 HOH B 22 122 49 HOH HOH . H 4 HOH B 23 123 139 HOH HOH . H 4 HOH B 24 124 94 HOH HOH . H 4 HOH B 25 125 111 HOH HOH . H 4 HOH B 26 126 212 HOH HOH . H 4 HOH B 27 127 129 HOH HOH . H 4 HOH B 28 128 89 HOH HOH . H 4 HOH B 29 129 192 HOH HOH . H 4 HOH B 30 130 15 HOH HOH . H 4 HOH B 31 131 46 HOH HOH . H 4 HOH B 32 132 151 HOH HOH . H 4 HOH B 33 133 37 HOH HOH . H 4 HOH B 34 134 72 HOH HOH . H 4 HOH B 35 135 35 HOH HOH . H 4 HOH B 36 136 11 HOH HOH . H 4 HOH B 37 137 170 HOH HOH . H 4 HOH B 38 138 161 HOH HOH . H 4 HOH B 39 139 95 HOH HOH . H 4 HOH B 40 140 141 HOH HOH . H 4 HOH B 41 141 195 HOH HOH . H 4 HOH B 42 142 79 HOH HOH . H 4 HOH B 43 143 14 HOH HOH . H 4 HOH B 44 144 96 HOH HOH . H 4 HOH B 45 145 144 HOH HOH . H 4 HOH B 46 146 119 HOH HOH . H 4 HOH B 47 147 229 HOH HOH . H 4 HOH B 48 148 211 HOH HOH . H 4 HOH B 49 149 162 HOH HOH . H 4 HOH B 50 150 181 HOH HOH . H 4 HOH B 51 151 36 HOH HOH . H 4 HOH B 52 152 45 HOH HOH . H 4 HOH B 53 153 204 HOH HOH . H 4 HOH B 54 154 190 HOH HOH . I 4 HOH C 1 201 135 HOH HOH . I 4 HOH C 2 202 179 HOH HOH . I 4 HOH C 3 203 213 HOH HOH . I 4 HOH C 4 204 193 HOH HOH . I 4 HOH C 5 205 123 HOH HOH . I 4 HOH C 6 206 230 HOH HOH . I 4 HOH C 7 207 226 HOH HOH . I 4 HOH C 8 208 115 HOH HOH . I 4 HOH C 9 209 88 HOH HOH . I 4 HOH C 10 210 154 HOH HOH . I 4 HOH C 11 211 98 HOH HOH . I 4 HOH C 12 212 209 HOH HOH . I 4 HOH C 13 213 10 HOH HOH . I 4 HOH C 14 214 214 HOH HOH . I 4 HOH C 15 215 109 HOH HOH . I 4 HOH C 16 216 1 HOH HOH . I 4 HOH C 17 217 126 HOH HOH . I 4 HOH C 18 218 5 HOH HOH . I 4 HOH C 19 219 221 HOH HOH . I 4 HOH C 20 220 48 HOH HOH . I 4 HOH C 21 221 16 HOH HOH . I 4 HOH C 22 222 17 HOH HOH . I 4 HOH C 23 223 57 HOH HOH . I 4 HOH C 24 224 51 HOH HOH . I 4 HOH C 25 225 34 HOH HOH . I 4 HOH C 26 226 39 HOH HOH . I 4 HOH C 27 227 20 HOH HOH . I 4 HOH C 28 228 128 HOH HOH . I 4 HOH C 29 229 69 HOH HOH . I 4 HOH C 30 230 108 HOH HOH . I 4 HOH C 31 231 171 HOH HOH . I 4 HOH C 32 232 56 HOH HOH . I 4 HOH C 33 233 182 HOH HOH . I 4 HOH C 34 234 124 HOH HOH . I 4 HOH C 35 235 157 HOH HOH . I 4 HOH C 36 236 54 HOH HOH . I 4 HOH C 37 237 53 HOH HOH . I 4 HOH C 38 238 140 HOH HOH . I 4 HOH C 39 239 220 HOH HOH . I 4 HOH C 40 240 122 HOH HOH . I 4 HOH C 41 241 41 HOH HOH . I 4 HOH C 42 242 149 HOH HOH . I 4 HOH C 43 243 131 HOH HOH . I 4 HOH C 44 244 26 HOH HOH . I 4 HOH C 45 245 117 HOH HOH . I 4 HOH C 46 246 38 HOH HOH . I 4 HOH C 47 247 116 HOH HOH . I 4 HOH C 48 248 173 HOH HOH . I 4 HOH C 49 249 189 HOH HOH . I 4 HOH C 50 250 176 HOH HOH . I 4 HOH C 51 251 47 HOH HOH . I 4 HOH C 52 252 66 HOH HOH . I 4 HOH C 53 253 28 HOH HOH . I 4 HOH C 54 254 155 HOH HOH . I 4 HOH C 55 255 174 HOH HOH . I 4 HOH C 56 256 180 HOH HOH . I 4 HOH C 57 257 81 HOH HOH . I 4 HOH C 58 258 101 HOH HOH . I 4 HOH C 59 259 156 HOH HOH . I 4 HOH C 60 260 197 HOH HOH . I 4 HOH C 61 261 52 HOH HOH . I 4 HOH C 62 262 198 HOH HOH . I 4 HOH C 63 263 107 HOH HOH . I 4 HOH C 64 264 70 HOH HOH . I 4 HOH C 65 265 143 HOH HOH . I 4 HOH C 66 266 222 HOH HOH . J 4 HOH D 1 201 103 HOH HOH . J 4 HOH D 2 202 188 HOH HOH . J 4 HOH D 3 203 18 HOH HOH . J 4 HOH D 4 204 224 HOH HOH . J 4 HOH D 5 205 50 HOH HOH . J 4 HOH D 6 206 22 HOH HOH . J 4 HOH D 7 207 183 HOH HOH . J 4 HOH D 8 208 43 HOH HOH . J 4 HOH D 9 209 86 HOH HOH . J 4 HOH D 10 210 218 HOH HOH . J 4 HOH D 11 211 121 HOH HOH . J 4 HOH D 12 212 61 HOH HOH . J 4 HOH D 13 213 127 HOH HOH . J 4 HOH D 14 214 3 HOH HOH . J 4 HOH D 15 215 219 HOH HOH . J 4 HOH D 16 216 168 HOH HOH . J 4 HOH D 17 217 12 HOH HOH . J 4 HOH D 18 218 63 HOH HOH . J 4 HOH D 19 219 2 HOH HOH . J 4 HOH D 20 220 137 HOH HOH . J 4 HOH D 21 221 112 HOH HOH . J 4 HOH D 22 222 92 HOH HOH . J 4 HOH D 23 223 164 HOH HOH . J 4 HOH D 24 224 24 HOH HOH . J 4 HOH D 25 225 73 HOH HOH . J 4 HOH D 26 226 138 HOH HOH . J 4 HOH D 27 227 87 HOH HOH . J 4 HOH D 28 228 7 HOH HOH . J 4 HOH D 29 229 177 HOH HOH . J 4 HOH D 30 230 74 HOH HOH . J 4 HOH D 31 231 104 HOH HOH . J 4 HOH D 32 232 62 HOH HOH . J 4 HOH D 33 233 203 HOH HOH . J 4 HOH D 34 234 31 HOH HOH . J 4 HOH D 35 235 27 HOH HOH . J 4 HOH D 36 236 44 HOH HOH . J 4 HOH D 37 237 33 HOH HOH . J 4 HOH D 38 238 194 HOH HOH . J 4 HOH D 39 239 223 HOH HOH . J 4 HOH D 40 240 99 HOH HOH . J 4 HOH D 41 241 208 HOH HOH . J 4 HOH D 42 242 175 HOH HOH . J 4 HOH D 43 243 191 HOH HOH . J 4 HOH D 44 244 130 HOH HOH . J 4 HOH D 45 245 60 HOH HOH . J 4 HOH D 46 246 205 HOH HOH . J 4 HOH D 47 247 196 HOH HOH . J 4 HOH D 48 248 225 HOH HOH . J 4 HOH D 49 249 77 HOH HOH . J 4 HOH D 50 250 146 HOH HOH . J 4 HOH D 51 251 178 HOH HOH . J 4 HOH D 52 252 167 HOH HOH . J 4 HOH D 53 253 186 HOH HOH . J 4 HOH D 54 254 84 HOH HOH . J 4 HOH D 55 255 132 HOH HOH . J 4 HOH D 56 256 113 HOH HOH . J 4 HOH D 57 257 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 3 2.687 18.887 1.241 1 30.78 ? C1 GOL 100 D 1 HETATM 2 O O1 GOL . . . F 3 1.407 19.386 0.875 1 49.51 ? O1 GOL 100 D 1 HETATM 3 C C2 GOL . . . F 3 2.887 18.935 2.74 1 24.74 ? C2 GOL 100 D 1 HETATM 4 O O2 GOL . . . F 3 1.65 19.246 3.379 1 49.15 ? O2 GOL 100 D 1 HETATM 5 C C3 GOL . . . F 3 3.449 17.646 3.302 1 24.8 ? C3 GOL 100 D 1 HETATM 6 O O3 GOL . . . F 3 4.779 17.409 2.845 1 37.17 ? O3 GOL 100 D 1 HETATM 7 H H11 GOL . . . F 3 3.398 19.393 0.816 1 36.94 ? H11 GOL 100 D 1 HETATM 8 H H12 GOL . . . F 3 2.797 17.966 0.958 1 36.94 ? H12 GOL 100 D 1 HETATM 9 H HO1 GOL . . . F 3 1.14 19.904 1.494 1 59.41 ? HO1 GOL 100 D 1 HETATM 10 H H2 GOL . . . F 3 3.533 19.635 2.921 1 29.69 ? H2 GOL 100 D 1 HETATM 11 H HO2 GOL . . . F 3 1.246 18.513 3.527 1 58.97 ? HO2 GOL 100 D 1 HETATM 12 H H31 GOL . . . F 3 2.865 16.916 3.041 1 29.76 ? H31 GOL 100 D 1 HETATM 13 H H32 GOL . . . F 3 3.415 17.689 4.271 1 29.76 ? H32 GOL 100 D 1 HETATM 14 H HO3 GOL . . . F 3 4.819 16.626 2.518 1 44.6 ? HO3 GOL 100 D 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #