data_9ESB # _model_server_result.job_id -AxqGLJTM7YzhipCAg36HQ _model_server_result.datetime_utc '2025-03-10 04:06:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9esb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 9ESB # _exptl.entry_id 9ESB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.752 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (~{R})-(6-chloranylimidazo[1,5-a]pyridin-5-yl)-(1-phenyl-1,2,3-triazol-4-yl)methanol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9ESB _cell.length_a 84.245 _cell.length_b 92.135 _cell.length_c 132.329 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9ESB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 323 A CYS 308 1_555 B SG CYS 323 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 A NE2 HIS 361 A HIS 346 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc2 C FE HEM . A HEM 501 1_555 D N4 A1H6T . A A1H6T 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc3 B NE2 HIS 361 B HIS 346 1_555 E FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc4 E FE HEM . B HEM 501 1_555 F N4 A1H6T . B A1H6T 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? # _chem_comp.formula 'C16 H12 Cl N5 O' _chem_comp.formula_weight 325.752 _chem_comp.id A1H6T _chem_comp.mon_nstd_flag . _chem_comp.name (~{R})-(6-chloranylimidazo[1,5-a]pyridin-5-yl)-(1-phenyl-1,2,3-triazol-4-yl)methanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C CL A1H6T sing 1 n n C C1 A1H6T sing 2 n y C1 C2 A1H6T doub 3 n y C3 C A1H6T doub 4 n y C4 C3 A1H6T sing 5 n n C5 C4 A1H6T sing 6 n n C5 N A1H6T sing 7 n y N N1 A1H6T doub 8 n y C6 C5 A1H6T doub 9 n y N2 C6 A1H6T sing 10 n y N1 N2 A1H6T sing 11 n y C7 N2 A1H6T sing 12 n n C7 C8 A1H6T doub 13 n y C8 C9 A1H6T sing 14 n y C9 C10 A1H6T doub 15 n y C10 C11 A1H6T sing 16 n y C11 C12 A1H6T doub 17 n y C12 C7 A1H6T sing 18 n y O C4 A1H6T sing 19 n n N3 C3 A1H6T sing 20 n y N3 C13 A1H6T sing 21 n y C2 C13 A1H6T sing 22 n y C13 C14 A1H6T doub 23 n y C14 N4 A1H6T sing 24 n y N4 C15 A1H6T doub 25 n y C15 N3 A1H6T sing 26 n y C4 H A1H6T sing 27 n n C6 H3 A1H6T sing 28 n n C8 H4 A1H6T sing 29 n n C10 H6 A1H6T sing 30 n n C15 H11 A1H6T sing 31 n n C14 H10 A1H6T sing 32 n n C2 H2 A1H6T sing 33 n n C1 H1 A1H6T sing 34 n n O H9 A1H6T sing 35 n n C12 H8 A1H6T sing 36 n n C11 H7 A1H6T sing 37 n n C9 H5 A1H6T sing 38 n n # _atom_sites.entry_id 9ESB _atom_sites.fract_transf_matrix[1][1] 0.01187 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010854 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007557 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 501 HEM HEM . D 3 A1H6T A 1 502 1 A1H6T LIG . E 2 HEM B 1 501 501 HEM HEM . F 3 A1H6T B 1 502 2 A1H6T LIG . G 4 HOH A 1 601 3 HOH HOH . G 4 HOH A 2 602 26 HOH HOH . G 4 HOH A 3 603 23 HOH HOH . G 4 HOH A 4 604 80 HOH HOH . G 4 HOH A 5 605 17 HOH HOH . G 4 HOH A 6 606 4 HOH HOH . G 4 HOH A 7 607 25 HOH HOH . G 4 HOH A 8 608 9 HOH HOH . G 4 HOH A 9 609 29 HOH HOH . G 4 HOH A 10 610 41 HOH HOH . G 4 HOH A 11 611 69 HOH HOH . G 4 HOH A 12 612 8 HOH HOH . G 4 HOH A 13 613 42 HOH HOH . G 4 HOH A 14 614 36 HOH HOH . G 4 HOH A 15 615 74 HOH HOH . G 4 HOH A 16 616 43 HOH HOH . G 4 HOH A 17 617 1 HOH HOH . G 4 HOH A 18 618 18 HOH HOH . G 4 HOH A 19 619 54 HOH HOH . G 4 HOH A 20 620 86 HOH HOH . G 4 HOH A 21 621 11 HOH HOH . G 4 HOH A 22 622 46 HOH HOH . G 4 HOH A 23 623 38 HOH HOH . G 4 HOH A 24 624 5 HOH HOH . G 4 HOH A 25 625 55 HOH HOH . G 4 HOH A 26 626 24 HOH HOH . G 4 HOH A 27 627 91 HOH HOH . G 4 HOH A 28 628 47 HOH HOH . G 4 HOH A 29 629 7 HOH HOH . G 4 HOH A 30 630 90 HOH HOH . G 4 HOH A 31 631 70 HOH HOH . G 4 HOH A 32 632 68 HOH HOH . G 4 HOH A 33 633 20 HOH HOH . G 4 HOH A 34 634 56 HOH HOH . G 4 HOH A 35 635 53 HOH HOH . G 4 HOH A 36 636 28 HOH HOH . G 4 HOH A 37 637 27 HOH HOH . G 4 HOH A 38 638 76 HOH HOH . G 4 HOH A 39 639 34 HOH HOH . G 4 HOH A 40 640 66 HOH HOH . G 4 HOH A 41 641 60 HOH HOH . G 4 HOH A 42 642 50 HOH HOH . G 4 HOH A 43 643 92 HOH HOH . H 4 HOH B 1 601 75 HOH HOH . H 4 HOH B 2 602 10 HOH HOH . H 4 HOH B 3 603 33 HOH HOH . H 4 HOH B 4 604 21 HOH HOH . H 4 HOH B 5 605 15 HOH HOH . H 4 HOH B 6 606 13 HOH HOH . H 4 HOH B 7 607 82 HOH HOH . H 4 HOH B 8 608 58 HOH HOH . H 4 HOH B 9 609 30 HOH HOH . H 4 HOH B 10 610 89 HOH HOH . H 4 HOH B 11 611 52 HOH HOH . H 4 HOH B 12 612 2 HOH HOH . H 4 HOH B 13 613 48 HOH HOH . H 4 HOH B 14 614 22 HOH HOH . H 4 HOH B 15 615 61 HOH HOH . H 4 HOH B 16 616 71 HOH HOH . H 4 HOH B 17 617 67 HOH HOH . H 4 HOH B 18 618 45 HOH HOH . H 4 HOH B 19 619 14 HOH HOH . H 4 HOH B 20 620 37 HOH HOH . H 4 HOH B 21 621 39 HOH HOH . H 4 HOH B 22 622 62 HOH HOH . H 4 HOH B 23 623 84 HOH HOH . H 4 HOH B 24 624 31 HOH HOH . H 4 HOH B 25 625 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1H6T . . . D 3 10.821 -29.834 -36.322 1 42.06 ? N1 A1H6T 502 A 1 HETATM 2 N N3 A1H6T . . . D 3 11.139 -30.86 -31.913 1 35.02 ? N3 A1H6T 502 A 1 HETATM 3 C C4 A1H6T . . . D 3 10.853 -28.589 -32.928 1 36.66 ? C4 A1H6T 502 A 1 HETATM 4 C C5 A1H6T . . . D 3 10.86 -28.77 -34.418 1 39.75 ? C5 A1H6T 502 A 1 HETATM 5 C C6 A1H6T . . . D 3 10.884 -27.816 -35.392 1 41.68 ? C6 A1H6T 502 A 1 HETATM 6 C C7 A1H6T . . . D 3 10.762 -27.992 -37.887 1 46.54 ? C7 A1H6T 502 A 1 HETATM 7 C C8 A1H6T . . . D 3 11.065 -28.811 -38.962 1 47.25 ? C8 A1H6T 502 A 1 HETATM 8 C C10 A1H6T . . . D 3 10.865 -26.93 -40.448 1 48.99 ? C10 A1H6T 502 A 1 HETATM 9 C C13 A1H6T . . . D 3 10.731 -31.928 -31.106 1 34.67 ? C13 A1H6T 502 A 1 HETATM 10 C C15 A1H6T . . . D 3 12.371 -31.188 -32.408 1 34.64 ? C15 A1H6T 502 A 1 HETATM 11 CL CL A1H6T . . . D 3 7.936 -28.463 -31.773 1 36.54 ? CL A1H6T 502 A 1 HETATM 12 C C A1H6T . . . D 3 9.081 -29.738 -31.515 1 35.9 ? C A1H6T 502 A 1 HETATM 13 C C3 A1H6T . . . D 3 10.308 -29.746 -32.125 1 35.88 ? C3 A1H6T 502 A 1 HETATM 14 N N4 A1H6T . . . D 3 12.777 -32.368 -31.991 1 34.54 ? N4 A1H6T 502 A 1 HETATM 15 C C14 A1H6T . . . D 3 11.765 -32.833 -31.182 1 34.5 ? C14 A1H6T 502 A 1 HETATM 16 C C2 A1H6T . . . D 3 9.452 -31.865 -30.493 1 34.8 ? C2 A1H6T 502 A 1 HETATM 17 C C1 A1H6T . . . D 3 8.652 -30.803 -30.69 1 35.23 ? C1 A1H6T 502 A 1 HETATM 18 O O A1H6T . . . D 3 12.15 -28.26 -32.541 1 34.83 ? O A1H6T 502 A 1 HETATM 19 N N2 A1H6T . . . D 3 10.854 -28.5 -36.555 1 43.42 ? N2 A1H6T 502 A 1 HETATM 20 N N A1H6T . . . D 3 10.823 -29.996 -35.019 1 40.81 ? N A1H6T 502 A 1 HETATM 21 C C12 A1H6T . . . D 3 10.497 -26.634 -38.092 1 48.42 ? C12 A1H6T 502 A 1 HETATM 22 C C11 A1H6T . . . D 3 10.553 -26.113 -39.376 1 49.11 ? C11 A1H6T 502 A 1 HETATM 23 C C9 A1H6T . . . D 3 11.119 -28.274 -40.24 1 48.16 ? C9 A1H6T 502 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #