data_9EUN # _model_server_result.job_id k6cVbE1Y3-4ZOuBm_ZJTYw _model_server_result.datetime_utc '2024-11-01 07:26:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9eun # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":4404}' # _entry.id 9EUN # _exptl.entry_id 9EUN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9EUN _cell.length_a 167.55 _cell.length_b 167.55 _cell.length_c 52.05 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EUN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N ? 6 K N N ? 6 L N N ? 6 M N N ? 6 N N N ? 6 Q N N ? 6 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 75 B CYS 4327 1_555 O ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc2 B SG CYS 78 B CYS 4330 1_555 O ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc3 B NE2 HIS 84 B HIS 4336 1_555 O ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc4 B SG CYS 91 B CYS 4343 1_555 O ZN ZN . B ZN 4401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc5 B SG CYS 118 B CYS 4370 1_555 P ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc6 B SG CYS 121 B CYS 4373 1_555 P ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc7 B SG CYS 129 B CYS 4381 1_555 P ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc8 B SG CYS 131 B CYS 4383 1_555 P ZN ZN . B ZN 4402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 9EUN _atom_sites.fract_transf_matrix[1][1] 0.005968 _atom_sites.fract_transf_matrix[1][2] 0.003446 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MES A 1 7201 7906 MES MES . D 4 SAM A 1 7202 7908 SAM SAM . E 5 MGP A 1 7203 7909 MGP MGP . F 6 EDO A 1 7204 7910 EDO EDO . G 6 EDO A 1 7205 7911 EDO EDO . H 6 EDO A 1 7206 7912 EDO EDO . I 6 EDO A 1 7207 7913 EDO EDO . J 6 EDO A 1 7208 7915 EDO EDO . K 6 EDO A 1 7209 7916 EDO EDO . L 6 EDO A 1 7210 7918 EDO EDO . M 6 EDO A 1 7211 7920 EDO EDO . N 6 EDO A 1 7212 7921 EDO EDO . O 7 ZN B 1 4401 8654 ZN ZN . P 7 ZN B 1 4402 8655 ZN ZN . Q 6 EDO B 1 4403 8657 EDO EDO . R 6 EDO B 1 4404 8658 EDO EDO . S 8 HOH A 1 7301 75 HOH HOH . S 8 HOH A 2 7302 740 HOH HOH . S 8 HOH A 3 7303 793 HOH HOH . S 8 HOH A 4 7304 13 HOH HOH . S 8 HOH A 5 7305 762 HOH HOH . S 8 HOH A 6 7306 760 HOH HOH . S 8 HOH A 7 7307 11 HOH HOH . S 8 HOH A 8 7308 10 HOH HOH . S 8 HOH A 9 7309 714 HOH HOH . S 8 HOH A 10 7310 39 HOH HOH . S 8 HOH A 11 7311 34 HOH HOH . S 8 HOH A 12 7312 83 HOH HOH . S 8 HOH A 13 7313 132 HOH HOH . S 8 HOH A 14 7314 62 HOH HOH . S 8 HOH A 15 7315 22 HOH HOH . S 8 HOH A 16 7316 742 HOH HOH . S 8 HOH A 17 7317 38 HOH HOH . S 8 HOH A 18 7318 23 HOH HOH . S 8 HOH A 19 7319 9 HOH HOH . S 8 HOH A 20 7320 172 HOH HOH . S 8 HOH A 21 7321 37 HOH HOH . S 8 HOH A 22 7322 12 HOH HOH . S 8 HOH A 23 7323 5 HOH HOH . S 8 HOH A 24 7324 7 HOH HOH . S 8 HOH A 25 7325 1 HOH HOH . S 8 HOH A 26 7326 85 HOH HOH . S 8 HOH A 27 7327 660 HOH HOH . S 8 HOH A 28 7328 84 HOH HOH . S 8 HOH A 29 7329 51 HOH HOH . S 8 HOH A 30 7330 16 HOH HOH . S 8 HOH A 31 7331 33 HOH HOH . S 8 HOH A 32 7332 63 HOH HOH . S 8 HOH A 33 7333 397 HOH HOH . S 8 HOH A 34 7334 166 HOH HOH . S 8 HOH A 35 7335 520 HOH HOH . S 8 HOH A 36 7336 68 HOH HOH . S 8 HOH A 37 7337 14 HOH HOH . S 8 HOH A 38 7338 15 HOH HOH . S 8 HOH A 39 7339 56 HOH HOH . S 8 HOH A 40 7340 48 HOH HOH . S 8 HOH A 41 7341 21 HOH HOH . S 8 HOH A 42 7342 2 HOH HOH . S 8 HOH A 43 7343 44 HOH HOH . S 8 HOH A 44 7344 58 HOH HOH . S 8 HOH A 45 7345 701 HOH HOH . S 8 HOH A 46 7346 750 HOH HOH . S 8 HOH A 47 7347 95 HOH HOH . S 8 HOH A 48 7348 756 HOH HOH . S 8 HOH A 49 7349 4 HOH HOH . S 8 HOH A 50 7350 698 HOH HOH . S 8 HOH A 51 7351 783 HOH HOH . S 8 HOH A 52 7352 35 HOH HOH . S 8 HOH A 53 7353 693 HOH HOH . S 8 HOH A 54 7354 487 HOH HOH . S 8 HOH A 55 7355 81 HOH HOH . S 8 HOH A 56 7356 28 HOH HOH . S 8 HOH A 57 7357 401 HOH HOH . S 8 HOH A 58 7358 64 HOH HOH . S 8 HOH A 59 7359 784 HOH HOH . S 8 HOH A 60 7360 82 HOH HOH . S 8 HOH A 61 7361 675 HOH HOH . S 8 HOH A 62 7362 705 HOH HOH . S 8 HOH A 63 7363 689 HOH HOH . S 8 HOH A 64 7364 790 HOH HOH . S 8 HOH A 65 7365 685 HOH HOH . S 8 HOH A 66 7366 739 HOH HOH . S 8 HOH A 67 7367 700 HOH HOH . S 8 HOH A 68 7368 674 HOH HOH . S 8 HOH A 69 7369 797 HOH HOH . S 8 HOH A 70 7370 170 HOH HOH . S 8 HOH A 71 7371 36 HOH HOH . S 8 HOH A 72 7372 772 HOH HOH . S 8 HOH A 73 7373 472 HOH HOH . S 8 HOH A 74 7374 692 HOH HOH . S 8 HOH A 75 7375 736 HOH HOH . S 8 HOH A 76 7376 31 HOH HOH . S 8 HOH A 77 7377 50 HOH HOH . S 8 HOH A 78 7378 145 HOH HOH . S 8 HOH A 79 7379 744 HOH HOH . S 8 HOH A 80 7380 641 HOH HOH . S 8 HOH A 81 7381 720 HOH HOH . S 8 HOH A 82 7382 741 HOH HOH . S 8 HOH A 83 7383 126 HOH HOH . S 8 HOH A 84 7384 73 HOH HOH . S 8 HOH A 85 7385 755 HOH HOH . S 8 HOH A 86 7386 721 HOH HOH . S 8 HOH A 87 7387 690 HOH HOH . S 8 HOH A 88 7388 392 HOH HOH . S 8 HOH A 89 7389 119 HOH HOH . S 8 HOH A 90 7390 668 HOH HOH . S 8 HOH A 91 7391 751 HOH HOH . S 8 HOH A 92 7392 697 HOH HOH . S 8 HOH A 93 7393 722 HOH HOH . S 8 HOH A 94 7394 99 HOH HOH . S 8 HOH A 95 7395 673 HOH HOH . S 8 HOH A 96 7396 417 HOH HOH . S 8 HOH A 97 7397 749 HOH HOH . S 8 HOH A 98 7398 532 HOH HOH . S 8 HOH A 99 7399 396 HOH HOH . S 8 HOH A 100 7400 388 HOH HOH . S 8 HOH A 101 7401 699 HOH HOH . S 8 HOH A 102 7402 766 HOH HOH . S 8 HOH A 103 7403 728 HOH HOH . S 8 HOH A 104 7404 785 HOH HOH . S 8 HOH A 105 7405 796 HOH HOH . S 8 HOH A 106 7406 687 HOH HOH . S 8 HOH A 107 7407 694 HOH HOH . S 8 HOH A 108 7408 725 HOH HOH . S 8 HOH A 109 7409 763 HOH HOH . S 8 HOH A 110 7410 718 HOH HOH . S 8 HOH A 111 7411 686 HOH HOH . S 8 HOH A 112 7412 461 HOH HOH . S 8 HOH A 113 7413 688 HOH HOH . S 8 HOH A 114 7414 752 HOH HOH . S 8 HOH A 115 7415 726 HOH HOH . S 8 HOH A 116 7416 737 HOH HOH . S 8 HOH A 117 7417 669 HOH HOH . S 8 HOH A 118 7418 676 HOH HOH . S 8 HOH A 119 7419 695 HOH HOH . S 8 HOH A 120 7420 795 HOH HOH . S 8 HOH A 121 7421 716 HOH HOH . S 8 HOH A 122 7422 765 HOH HOH . S 8 HOH A 123 7423 761 HOH HOH . S 8 HOH A 124 7424 475 HOH HOH . S 8 HOH A 125 7425 696 HOH HOH . S 8 HOH A 126 7426 731 HOH HOH . S 8 HOH A 127 7427 774 HOH HOH . S 8 HOH A 128 7428 759 HOH HOH . S 8 HOH A 129 7429 691 HOH HOH . S 8 HOH A 130 7430 780 HOH HOH . S 8 HOH A 131 7431 704 HOH HOH . S 8 HOH A 132 7432 779 HOH HOH . S 8 HOH A 133 7433 770 HOH HOH . S 8 HOH A 134 7434 781 HOH HOH . S 8 HOH A 135 7435 776 HOH HOH . S 8 HOH A 136 7436 713 HOH HOH . S 8 HOH A 137 7437 777 HOH HOH . S 8 HOH A 138 7438 782 HOH HOH . S 8 HOH A 139 7439 743 HOH HOH . S 8 HOH A 140 7440 794 HOH HOH . S 8 HOH A 141 7441 373 HOH HOH . S 8 HOH A 142 7442 778 HOH HOH . S 8 HOH A 143 7443 771 HOH HOH . T 8 HOH B 1 4501 114 HOH HOH . T 8 HOH B 2 4502 727 HOH HOH . T 8 HOH B 3 4503 30 HOH HOH . T 8 HOH B 4 4504 787 HOH HOH . T 8 HOH B 5 4505 165 HOH HOH . T 8 HOH B 6 4506 711 HOH HOH . T 8 HOH B 7 4507 184 HOH HOH . T 8 HOH B 8 4508 96 HOH HOH . T 8 HOH B 9 4509 6 HOH HOH . T 8 HOH B 10 4510 8 HOH HOH . T 8 HOH B 11 4511 710 HOH HOH . T 8 HOH B 12 4512 80 HOH HOH . T 8 HOH B 13 4513 24 HOH HOH . T 8 HOH B 14 4514 791 HOH HOH . T 8 HOH B 15 4515 677 HOH HOH . T 8 HOH B 16 4516 757 HOH HOH . T 8 HOH B 17 4517 670 HOH HOH . T 8 HOH B 18 4518 745 HOH HOH . T 8 HOH B 19 4519 709 HOH HOH . T 8 HOH B 20 4520 773 HOH HOH . T 8 HOH B 21 4521 767 HOH HOH . T 8 HOH B 22 4522 681 HOH HOH . T 8 HOH B 23 4523 29 HOH HOH . T 8 HOH B 24 4524 708 HOH HOH . T 8 HOH B 25 4525 788 HOH HOH . T 8 HOH B 26 4526 32 HOH HOH . T 8 HOH B 27 4527 679 HOH HOH . T 8 HOH B 28 4528 769 HOH HOH . T 8 HOH B 29 4529 672 HOH HOH . T 8 HOH B 30 4530 754 HOH HOH . T 8 HOH B 31 4531 768 HOH HOH . T 8 HOH B 32 4532 398 HOH HOH . T 8 HOH B 33 4533 792 HOH HOH . T 8 HOH B 34 4534 680 HOH HOH . T 8 HOH B 35 4535 746 HOH HOH . T 8 HOH B 36 4536 734 HOH HOH . T 8 HOH B 37 4537 723 HOH HOH . T 8 HOH B 38 4538 678 HOH HOH . T 8 HOH B 39 4539 683 HOH HOH . T 8 HOH B 40 4540 671 HOH HOH . T 8 HOH B 41 4541 758 HOH HOH . T 8 HOH B 42 4542 682 HOH HOH . T 8 HOH B 43 4543 789 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . R 6 104.336 -13.104 4.189 1 81.54 ? C1 EDO 4404 B 1 HETATM 2 O O1 EDO . . . R 6 105.331 -12.282 4.783 1 78.95 ? O1 EDO 4404 B 1 HETATM 3 C C2 EDO . . . R 6 103.102 -13.262 5.056 1 69.24 ? C2 EDO 4404 B 1 HETATM 4 O O2 EDO . . . R 6 102.04 -12.44 4.606 1 73.86 ? O2 EDO 4404 B 1 HETATM 5 H H11 EDO . . . R 6 104.688 -13.99 4.01 1 97.86 ? H11 EDO 4404 B 1 HETATM 6 H H12 EDO . . . R 6 104.055 -12.738 3.337 1 97.86 ? H12 EDO 4404 B 1 HETATM 7 H HO1 EDO . . . R 6 105.987 -12.231 4.245 1 94.75 ? HO1 EDO 4404 B 1 HETATM 8 H H21 EDO . . . R 6 103.363 -13.052 5.966 1 83.1 ? H21 EDO 4404 B 1 HETATM 9 H H22 EDO . . . R 6 102.863 -14.202 5.045 1 83.1 ? H22 EDO 4404 B 1 HETATM 10 H HO2 EDO . . . R 6 101.316 -12.738 4.937 1 88.65 ? HO2 EDO 4404 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #