data_9EUO # _model_server_result.job_id 7CUJnnBIWLqmV-fFHIUGMA _model_server_result.datetime_utc '2024-10-10 12:16:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9euo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":702}' # _entry.id 9EUO # _exptl.entry_id 9EUO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9EUO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 129 A CYS 148 1_555 A SG CYS 138 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 45 L CYS 23 1_555 B SG CYS 111 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 41 H CYS 22 1_555 C SG CYS 115 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc1 A O ALA 25 A ALA 44 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc2 A OD1 ASN 30 A ASN 49 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc3 A O SER 258 A SER 320 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.951 ? metalc ? metalc4 A OG SER 258 A SER 320 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc5 A OD1 ASN 290 A ASN 352 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 519 n n CBA CAB Y01 sing 520 n n CBA CAN Y01 sing 521 n n CAN CAJ Y01 sing 522 n n CAJ CAO Y01 sing 523 n n CAO CBB Y01 sing 524 n n CBB CAC Y01 sing 525 n n CBB CBE Y01 sing 526 n n CBE CAP Y01 sing 527 n n CBE CBI Y01 sing 528 n n CAP CAQ Y01 sing 529 n n CAQ CBG Y01 sing 530 n n CBG CBI Y01 sing 531 n n CBG CBD Y01 sing 532 n n CBI CAE Y01 sing 533 n n CBI CAU Y01 sing 534 n n CAU CAS Y01 sing 535 n n CAS CBF Y01 sing 536 n n CBF CBD Y01 sing 537 n n CBF CBH Y01 sing 538 n n CBD CAK Y01 sing 539 n n CAK CAI Y01 sing 540 n n CAI CAZ Y01 doub 541 n n CAZ CAV Y01 sing 542 n n CAZ CBH Y01 sing 543 n n CAV CBC Y01 sing 544 n n CBH CAD Y01 sing 545 n n CBH CAT Y01 sing 546 n n CAT CAR Y01 sing 547 n n CAR CBC Y01 sing 548 n n CBC OAW Y01 sing 549 n n OAW CAY Y01 sing 550 n n CAY OAG Y01 doub 551 n n CAY CAM Y01 sing 552 n n CAM CAL Y01 sing 553 n n CAL CAX Y01 sing 554 n n CAX OAH Y01 sing 555 n n CAX OAF Y01 doub 556 n n CAA HAA1 Y01 sing 557 n n CAA HAA2 Y01 sing 558 n n CAA HAA3 Y01 sing 559 n n CBA HBA Y01 sing 560 n n CAB HAB1 Y01 sing 561 n n CAB HAB2 Y01 sing 562 n n CAB HAB3 Y01 sing 563 n n CAN HAN1 Y01 sing 564 n n CAN HAN2 Y01 sing 565 n n CAJ HAJ1 Y01 sing 566 n n CAJ HAJ2 Y01 sing 567 n n CAO HAO1 Y01 sing 568 n n CAO HAO2 Y01 sing 569 n n CBB HBB Y01 sing 570 n n CAC HAC1 Y01 sing 571 n n CAC HAC2 Y01 sing 572 n n CAC HAC3 Y01 sing 573 n n CBE HBE Y01 sing 574 n n CAP HAP1 Y01 sing 575 n n CAP HAP2 Y01 sing 576 n n CAQ HAQ1 Y01 sing 577 n n CAQ HAQ2 Y01 sing 578 n n CBG HBG Y01 sing 579 n n CBD HBD Y01 sing 580 n n CAE HAE1 Y01 sing 581 n n CAE HAE2 Y01 sing 582 n n CAE HAE3 Y01 sing 583 n n CAU HAU1 Y01 sing 584 n n CAU HAU2 Y01 sing 585 n n CAS HAS1 Y01 sing 586 n n CAS HAS2 Y01 sing 587 n n CBF HBF Y01 sing 588 n n CAK HAK1 Y01 sing 589 n n CAK HAK2 Y01 sing 590 n n CAI HAI Y01 sing 591 n n CAV HAV1 Y01 sing 592 n n CAV HAV2 Y01 sing 593 n n CBC HBC Y01 sing 594 n n CAD HAD1 Y01 sing 595 n n CAD HAD2 Y01 sing 596 n n CAD HAD3 Y01 sing 597 n n CAT HAT1 Y01 sing 598 n n CAT HAT2 Y01 sing 599 n n CAR HAR1 Y01 sing 600 n n CAR HAR2 Y01 sing 601 n n CAM HAM1 Y01 sing 602 n n CAM HAM2 Y01 sing 603 n n CAL HAL1 Y01 sing 604 n n CAL HAL2 Y01 sing 605 n n OAH HAH Y01 sing 606 n n # _atom_sites.entry_id 9EUO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 A1H8F A 1 701 601 A1H8F 248 . E 5 Y01 A 1 702 604 Y01 CHS . F 6 144 A 1 703 605 144 144 . G 7 CLR A 1 704 606 CLR CLR . H 8 NA A 1 705 1 NA NA . I 9 CL A 1 706 1 CL CL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . E 5 103.37 125.554 116.849 1 20 ? CAA Y01 702 A 1 HETATM 2 C CBA Y01 . . . E 5 104.668 125.617 117.661 1 20 ? CBA Y01 702 A 1 HETATM 3 C CAB Y01 . . . E 5 105.321 126.989 117.563 1 20 ? CAB Y01 702 A 1 HETATM 4 C CAN Y01 . . . E 5 104.363 125.257 119.135 1 20 ? CAN Y01 702 A 1 HETATM 5 C CAJ Y01 . . . E 5 105.665 124.705 119.756 1 20 ? CAJ Y01 702 A 1 HETATM 6 C CAO Y01 . . . E 5 105.829 125.219 121.229 1 20 ? CAO Y01 702 A 1 HETATM 7 C CBB Y01 . . . E 5 106.54 124.116 122.056 1 20 ? CBB Y01 702 A 1 HETATM 8 C CAC Y01 . . . E 5 107.944 123.962 121.501 1 20 ? CAC Y01 702 A 1 HETATM 9 C CBE Y01 . . . E 5 106.558 124.408 123.536 1 20 ? CBE Y01 702 A 1 HETATM 10 C CAP Y01 . . . E 5 105.093 124.513 124.059 1 20 ? CAP Y01 702 A 1 HETATM 11 C CAQ Y01 . . . E 5 105.164 123.978 125.655 1 20 ? CAQ Y01 702 A 1 HETATM 12 C CBG Y01 . . . E 5 106.739 123.743 125.785 1 20 ? CBG Y01 702 A 1 HETATM 13 C CBI Y01 . . . E 5 107.188 123.295 124.429 1 20 ? CBI Y01 702 A 1 HETATM 14 C CAE Y01 . . . E 5 106.586 121.948 124.035 1 20 ? CAE Y01 702 A 1 HETATM 15 C CAU Y01 . . . E 5 108.613 123.322 124.364 1 20 ? CAU Y01 702 A 1 HETATM 16 C CAS Y01 . . . E 5 109.36 122.529 125.631 1 20 ? CAS Y01 702 A 1 HETATM 17 C CBF Y01 . . . E 5 108.708 122.943 126.974 1 20 ? CBF Y01 702 A 1 HETATM 18 C CBD Y01 . . . E 5 107.07 122.853 126.786 1 20 ? CBD Y01 702 A 1 HETATM 19 C CAK Y01 . . . E 5 106.503 123.243 128.17 1 20 ? CAK Y01 702 A 1 HETATM 20 C CAI Y01 . . . E 5 107.237 122.921 129.169 1 20 ? CAI Y01 702 A 1 HETATM 21 C CAZ Y01 . . . E 5 108.217 122.457 129.22 1 20 ? CAZ Y01 702 A 1 HETATM 22 C CAV Y01 . . . E 5 108.786 122.226 130.574 1 20 ? CAV Y01 702 A 1 HETATM 23 C CBH Y01 . . . E 5 108.96 122.049 128.159 1 20 ? CBH Y01 702 A 1 HETATM 24 C CAD Y01 . . . E 5 108.654 120.566 127.919 1 20 ? CAD Y01 702 A 1 HETATM 25 C CAT Y01 . . . E 5 110.548 122.245 128.537 1 20 ? CAT Y01 702 A 1 HETATM 26 C CAR Y01 . . . E 5 110.607 123.561 129.463 1 20 ? CAR Y01 702 A 1 HETATM 27 C CBC Y01 . . . E 5 109.95 123.167 130.826 1 20 ? CBC Y01 702 A 1 HETATM 28 O OAW Y01 . . . E 5 110.81 122.471 131.693 1 20 ? OAW Y01 702 A 1 HETATM 29 C CAY Y01 . . . E 5 112.206 122.675 131.527 1 20 ? CAY Y01 702 A 1 HETATM 30 O OAG Y01 . . . E 5 112.843 121.929 130.879 1 20 ? OAG Y01 702 A 1 HETATM 31 C CAM Y01 . . . E 5 112.906 123.884 132.165 1 20 ? CAM Y01 702 A 1 HETATM 32 C CAL Y01 . . . E 5 113.175 123.574 133.634 1 20 ? CAL Y01 702 A 1 HETATM 33 C CAX Y01 . . . E 5 114.208 122.452 133.779 1 20 ? CAX Y01 702 A 1 HETATM 34 O OAH Y01 . . . E 5 114.285 121.835 134.873 1 20 ? OAH Y01 702 A 1 HETATM 35 O OAF Y01 . . . E 5 114.976 122.144 132.826 1 20 ? OAF Y01 702 A 1 HETATM 36 H HAA1 Y01 . . . E 5 103.095 124.509 116.708 1 20 ? HAA1 Y01 702 A 1 HETATM 37 H HAA2 Y01 . . . E 5 102.585 126.066 117.394 1 20 ? HAA2 Y01 702 A 1 HETATM 38 H HAA3 Y01 . . . E 5 103.509 126.026 115.882 1 20 ? HAA3 Y01 702 A 1 HETATM 39 H HBA Y01 . . . E 5 105.37 124.9 117.281 1 20 ? HBA Y01 702 A 1 HETATM 40 H HAB1 Y01 . . . E 5 104.96 127.501 116.673 1 20 ? HAB1 Y01 702 A 1 HETATM 41 H HAB2 Y01 . . . E 5 105.094 127.569 118.447 1 20 ? HAB2 Y01 702 A 1 HETATM 42 H HAB3 Y01 . . . E 5 106.397 126.846 117.49 1 20 ? HAB3 Y01 702 A 1 HETATM 43 H HAN1 Y01 . . . E 5 104.04 126.137 119.676 1 20 ? HAN1 Y01 702 A 1 HETATM 44 H HAN2 Y01 . . . E 5 103.594 124.495 119.165 1 20 ? HAN2 Y01 702 A 1 HETATM 45 H HAJ1 Y01 . . . E 5 105.639 123.622 119.747 1 20 ? HAJ1 Y01 702 A 1 HETATM 46 H HAJ2 Y01 . . . E 5 106.505 125.046 119.16 1 20 ? HAJ2 Y01 702 A 1 HETATM 47 H HAO1 Y01 . . . E 5 106.428 126.119 121.236 1 20 ? HAO1 Y01 702 A 1 HETATM 48 H HAO2 Y01 . . . E 5 104.857 125.421 121.64 1 20 ? HAO2 Y01 702 A 1 HETATM 49 H HBB Y01 . . . E 5 105.994 123.208 121.892 1 20 ? HBB Y01 702 A 1 HETATM 50 H HAC1 Y01 . . . E 5 108.637 124.546 122.092 1 20 ? HAC1 Y01 702 A 1 HETATM 51 H HAC2 Y01 . . . E 5 108.222 122.915 121.511 1 20 ? HAC2 Y01 702 A 1 HETATM 52 H HAC3 Y01 . . . E 5 107.978 124.323 120.493 1 20 ? HAC3 Y01 702 A 1 HETATM 53 H HBE Y01 . . . E 5 107.068 125.341 123.714 1 20 ? HBE Y01 702 A 1 HETATM 54 H HAP1 Y01 . . . E 5 104.752 125.538 124.015 1 20 ? HAP1 Y01 702 A 1 HETATM 55 H HAP2 Y01 . . . E 5 104.451 123.865 123.473 1 20 ? HAP2 Y01 702 A 1 HETATM 56 H HAQ1 Y01 . . . E 5 104.625 123.05 125.786 1 20 ? HAQ1 Y01 702 A 1 HETATM 57 H HAQ2 Y01 . . . E 5 104.83 124.742 126.342 1 20 ? HAQ2 Y01 702 A 1 HETATM 58 H HBG Y01 . . . E 5 107.214 124.689 126.002 1 20 ? HBG Y01 702 A 1 HETATM 59 H HBD Y01 . . . E 5 106.798 121.858 126.534 1 20 ? HBD Y01 702 A 1 HETATM 60 H HAE1 Y01 . . . E 5 105.51 121.957 124.095 1 20 ? HAE1 Y01 702 A 1 HETATM 61 H HAE2 Y01 . . . E 5 106.867 121.712 123.016 1 20 ? HAE2 Y01 702 A 1 HETATM 62 H HAE3 Y01 . . . E 5 106.953 121.174 124.677 1 20 ? HAE3 Y01 702 A 1 HETATM 63 H HAU1 Y01 . . . E 5 108.947 122.856 123.461 1 20 ? HAU1 Y01 702 A 1 HETATM 64 H HAU2 Y01 . . . E 5 108.933 124.36 124.372 1 20 ? HAU2 Y01 702 A 1 HETATM 65 H HAS1 Y01 . . . E 5 110.408 122.813 125.645 1 20 ? HAS1 Y01 702 A 1 HETATM 66 H HAS2 Y01 . . . E 5 109.286 121.462 125.505 1 20 ? HAS2 Y01 702 A 1 HETATM 67 H HBF Y01 . . . E 5 108.983 123.959 127.207 1 20 ? HBF Y01 702 A 1 HETATM 68 H HAK1 Y01 . . . E 5 106.496 124.331 128.164 1 20 ? HAK1 Y01 702 A 1 HETATM 69 H HAK2 Y01 . . . E 5 105.595 122.664 128.278 1 20 ? HAK2 Y01 702 A 1 HETATM 70 H HAI Y01 . . . E 5 106.775 123.187 130.108 1 20 ? HAI Y01 702 A 1 HETATM 71 H HAV1 Y01 . . . E 5 109.245 121.256 130.519 1 20 ? HAV1 Y01 702 A 1 HETATM 72 H HAV2 Y01 . . . E 5 108.049 122.459 131.339 1 20 ? HAV2 Y01 702 A 1 HETATM 73 H HBC Y01 . . . E 5 109.589 124.06 131.314 1 20 ? HBC Y01 702 A 1 HETATM 74 H HAD1 Y01 . . . E 5 109.56 119.985 128.06 1 20 ? HAD1 Y01 702 A 1 HETATM 75 H HAD2 Y01 . . . E 5 108.266 120.399 126.918 1 20 ? HAD2 Y01 702 A 1 HETATM 76 H HAD3 Y01 . . . E 5 107.912 120.252 128.634 1 20 ? HAD3 Y01 702 A 1 HETATM 77 H HAT1 Y01 . . . E 5 110.885 121.395 129.11 1 20 ? HAT1 Y01 702 A 1 HETATM 78 H HAT2 Y01 . . . E 5 111.151 122.372 127.65 1 20 ? HAT2 Y01 702 A 1 HETATM 79 H HAR1 Y01 . . . E 5 110.01 124.345 129.011 1 20 ? HAR1 Y01 702 A 1 HETATM 80 H HAR2 Y01 . . . E 5 111.628 123.917 129.555 1 20 ? HAR2 Y01 702 A 1 HETATM 81 H HAM1 Y01 . . . E 5 113.838 124.078 131.648 1 20 ? HAM1 Y01 702 A 1 HETATM 82 H HAM2 Y01 . . . E 5 112.261 124.747 132.092 1 20 ? HAM2 Y01 702 A 1 HETATM 83 H HAL1 Y01 . . . E 5 113.541 124.467 134.125 1 20 ? HAL1 Y01 702 A 1 HETATM 84 H HAL2 Y01 . . . E 5 112.247 123.261 134.096 1 20 ? HAL2 Y01 702 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 84 #