data_9EUO # _model_server_result.job_id xfYUrOdnXCYtgXzBUXdRpQ _model_server_result.datetime_utc '2024-11-21 13:38:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9euo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":703}' # _entry.id 9EUO # _exptl.entry_id 9EUO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 122.143 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIS-HYDROXYMETHYL-METHYL-AMMONIUM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9EUO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9EUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 129 A CYS 148 1_555 A SG CYS 138 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 45 L CYS 23 1_555 B SG CYS 111 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 41 H CYS 22 1_555 C SG CYS 115 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc1 A O ALA 25 A ALA 44 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc2 A OD1 ASN 30 A ASN 49 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc3 A O SER 258 A SER 320 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.951 ? metalc ? metalc4 A OG SER 258 A SER 320 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc5 A OD1 ASN 290 A ASN 352 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id 144 _chem_comp.mon_nstd_flag . _chem_comp.name TRIS-HYDROXYMETHYL-METHYL-AMMONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N 144 sing 1 n n C1 H11 144 sing 2 n n C1 H12 144 sing 3 n n C1 H13 144 sing 4 n n N C2 144 sing 5 n n N C3 144 sing 6 n n N C4 144 sing 7 n n C2 O2 144 sing 8 n n C2 H21 144 sing 9 n n C2 H22 144 sing 10 n n O2 HO2 144 sing 11 n n C3 O3 144 sing 12 n n C3 H31 144 sing 13 n n C3 H32 144 sing 14 n n O3 HO3 144 sing 15 n n C4 O4 144 sing 16 n n C4 H41 144 sing 17 n n C4 H42 144 sing 18 n n O4 HO4 144 sing 19 n n # _atom_sites.entry_id 9EUO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 A1H8F A 1 701 601 A1H8F 248 . E 5 Y01 A 1 702 604 Y01 CHS . F 6 144 A 1 703 605 144 144 . G 7 CLR A 1 704 606 CLR CLR . H 8 NA A 1 705 1 NA NA . I 9 CL A 1 706 1 CL CL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 144 . . . F 6 109.668 111.287 111.829 1 20 ? C1 144 703 A 1 HETATM 2 N N 144 . . . F 6 109.391 111.826 110.502 1 20 ? N 144 703 A 1 HETATM 3 C C2 144 . . . F 6 110.59 111.907 109.708 1 20 ? C2 144 703 A 1 HETATM 4 O O2 144 . . . F 6 111.56 112.433 110.582 1 20 ? O2 144 703 A 1 HETATM 5 C C3 144 . . . F 6 108.498 110.867 109.891 1 20 ? C3 144 703 A 1 HETATM 6 O O3 144 . . . F 6 108.62 110.946 108.471 1 20 ? O3 144 703 A 1 HETATM 7 C C4 144 . . . F 6 108.723 113.114 110.577 1 20 ? C4 144 703 A 1 HETATM 8 O O4 144 . . . F 6 109.661 114.187 110.499 1 20 ? O4 144 703 A 1 HETATM 9 H H11 144 . . . F 6 109.893 112.08 112.494 1 20 ? H11 144 703 A 1 HETATM 10 H H12 144 . . . F 6 110.482 110.609 111.784 1 20 ? H12 144 703 A 1 HETATM 11 H H13 144 . . . F 6 108.816 110.768 112.183 1 20 ? H13 144 703 A 1 HETATM 12 H H21 144 . . . F 6 110.459 112.555 108.837 1 20 ? H21 144 703 A 1 HETATM 13 H H22 144 . . . F 6 110.899 110.912 109.379 1 20 ? H22 144 703 A 1 HETATM 14 H HO2 144 . . . F 6 111.389 113.367 110.751 1 20 ? HO2 144 703 A 1 HETATM 15 H H31 144 . . . F 6 107.472 111.076 110.201 1 20 ? H31 144 703 A 1 HETATM 16 H H32 144 . . . F 6 108.763 109.861 110.226 1 20 ? H32 144 703 A 1 HETATM 17 H HO3 144 . . . F 6 108.194 111.751 108.16 1 20 ? HO3 144 703 A 1 HETATM 18 H H41 144 . . . F 6 108.188 113.184 111.519 1 20 ? H41 144 703 A 1 HETATM 19 H H42 144 . . . F 6 107.991 113.193 109.774 1 20 ? H42 144 703 A 1 HETATM 20 H HO4 144 . . . F 6 109.354 114.85 109.867 1 20 ? HO4 144 703 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #