data_9F4L # _model_server_result.job_id IxG8DoWmu3y6l2UUI9nO-g _model_server_result.datetime_utc '2025-01-22 07:57:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9F4L # _exptl.entry_id 9F4L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 178.231 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,N-dimethyl-N~2~-phenylglycinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.56 _cell.angle_gamma 90 _cell.entry_id 9F4L _cell.length_a 38.181 _cell.length_b 43.929 _cell.length_c 55.749 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H14 N2 O' _chem_comp.formula_weight 178.231 _chem_comp.id WGP _chem_comp.mon_nstd_flag . _chem_comp.name N,N-dimethyl-N~2~-phenylglycinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N WGP sing 376 n n C1 N WGP sing 377 n n N C2 WGP sing 378 n n C2 O WGP doub 379 n n C3 C2 WGP sing 380 n n N1 C3 WGP sing 381 n n C4 N1 WGP sing 382 n n C4 C5 WGP sing 383 n y C5 C6 WGP doub 384 n y C6 C7 WGP sing 385 n y C7 C8 WGP doub 386 n y C8 C9 WGP sing 387 n y C9 C4 WGP doub 388 n y N1 H8 WGP sing 389 n n C5 H9 WGP sing 390 n n C6 H10 WGP sing 391 n n C7 H11 WGP sing 392 n n C8 H12 WGP sing 393 n n C H1 WGP sing 394 n n C H WGP sing 395 n n C H2 WGP sing 396 n n C1 H4 WGP sing 397 n n C1 H5 WGP sing 398 n n C1 H3 WGP sing 399 n n C3 H7 WGP sing 400 n n C3 H6 WGP sing 401 n n C9 H13 WGP sing 402 n n # _atom_sites.entry_id 9F4L _atom_sites.fract_transf_matrix[1][1] 0.026191 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001629 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017972 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WGP A 1 201 1 WGP LIG . C 3 HOH A 1 301 66 HOH HOH . C 3 HOH A 2 302 154 HOH HOH . C 3 HOH A 3 303 106 HOH HOH . C 3 HOH A 4 304 167 HOH HOH . C 3 HOH A 5 305 198 HOH HOH . C 3 HOH A 6 306 179 HOH HOH . C 3 HOH A 7 307 120 HOH HOH . C 3 HOH A 8 308 148 HOH HOH . C 3 HOH A 9 309 96 HOH HOH . C 3 HOH A 10 310 97 HOH HOH . C 3 HOH A 11 311 125 HOH HOH . C 3 HOH A 12 312 33 HOH HOH . C 3 HOH A 13 313 75 HOH HOH . C 3 HOH A 14 314 88 HOH HOH . C 3 HOH A 15 315 16 HOH HOH . C 3 HOH A 16 316 162 HOH HOH . C 3 HOH A 17 317 207 HOH HOH . C 3 HOH A 18 318 19 HOH HOH . C 3 HOH A 19 319 18 HOH HOH . C 3 HOH A 20 320 2 HOH HOH . C 3 HOH A 21 321 156 HOH HOH . C 3 HOH A 22 322 32 HOH HOH . C 3 HOH A 23 323 147 HOH HOH . C 3 HOH A 24 324 188 HOH HOH . C 3 HOH A 25 325 38 HOH HOH . C 3 HOH A 26 326 111 HOH HOH . C 3 HOH A 27 327 61 HOH HOH . C 3 HOH A 28 328 161 HOH HOH . C 3 HOH A 29 329 127 HOH HOH . C 3 HOH A 30 330 108 HOH HOH . C 3 HOH A 31 331 81 HOH HOH . C 3 HOH A 32 332 59 HOH HOH . C 3 HOH A 33 333 77 HOH HOH . C 3 HOH A 34 334 58 HOH HOH . C 3 HOH A 35 335 36 HOH HOH . C 3 HOH A 36 336 136 HOH HOH . C 3 HOH A 37 337 40 HOH HOH . C 3 HOH A 38 338 17 HOH HOH . C 3 HOH A 39 339 15 HOH HOH . C 3 HOH A 40 340 5 HOH HOH . C 3 HOH A 41 341 7 HOH HOH . C 3 HOH A 42 342 11 HOH HOH . C 3 HOH A 43 343 84 HOH HOH . C 3 HOH A 44 344 64 HOH HOH . C 3 HOH A 45 345 8 HOH HOH . C 3 HOH A 46 346 21 HOH HOH . C 3 HOH A 47 347 54 HOH HOH . C 3 HOH A 48 348 14 HOH HOH . C 3 HOH A 49 349 27 HOH HOH . C 3 HOH A 50 350 10 HOH HOH . C 3 HOH A 51 351 20 HOH HOH . C 3 HOH A 52 352 29 HOH HOH . C 3 HOH A 53 353 69 HOH HOH . C 3 HOH A 54 354 87 HOH HOH . C 3 HOH A 55 355 12 HOH HOH . C 3 HOH A 56 356 3 HOH HOH . C 3 HOH A 57 357 62 HOH HOH . C 3 HOH A 58 358 78 HOH HOH . C 3 HOH A 59 359 142 HOH HOH . C 3 HOH A 60 360 9 HOH HOH . C 3 HOH A 61 361 104 HOH HOH . C 3 HOH A 62 362 44 HOH HOH . C 3 HOH A 63 363 119 HOH HOH . C 3 HOH A 64 364 28 HOH HOH . C 3 HOH A 65 365 94 HOH HOH . C 3 HOH A 66 366 130 HOH HOH . C 3 HOH A 67 367 89 HOH HOH . C 3 HOH A 68 368 37 HOH HOH . C 3 HOH A 69 369 41 HOH HOH . C 3 HOH A 70 370 39 HOH HOH . C 3 HOH A 71 371 107 HOH HOH . C 3 HOH A 72 372 25 HOH HOH . C 3 HOH A 73 373 194 HOH HOH . C 3 HOH A 74 374 118 HOH HOH . C 3 HOH A 75 375 116 HOH HOH . C 3 HOH A 76 376 6 HOH HOH . C 3 HOH A 77 377 22 HOH HOH . C 3 HOH A 78 378 82 HOH HOH . C 3 HOH A 79 379 199 HOH HOH . C 3 HOH A 80 380 1 HOH HOH . C 3 HOH A 81 381 63 HOH HOH . C 3 HOH A 82 382 35 HOH HOH . C 3 HOH A 83 383 178 HOH HOH . C 3 HOH A 84 384 183 HOH HOH . C 3 HOH A 85 385 123 HOH HOH . C 3 HOH A 86 386 43 HOH HOH . C 3 HOH A 87 387 138 HOH HOH . C 3 HOH A 88 388 157 HOH HOH . C 3 HOH A 89 389 45 HOH HOH . C 3 HOH A 90 390 83 HOH HOH . C 3 HOH A 91 391 160 HOH HOH . C 3 HOH A 92 392 146 HOH HOH . C 3 HOH A 93 393 34 HOH HOH . C 3 HOH A 94 394 141 HOH HOH . C 3 HOH A 95 395 131 HOH HOH . C 3 HOH A 96 396 166 HOH HOH . C 3 HOH A 97 397 165 HOH HOH . C 3 HOH A 98 398 203 HOH HOH . C 3 HOH A 99 399 4 HOH HOH . C 3 HOH A 100 400 117 HOH HOH . C 3 HOH A 101 401 56 HOH HOH . C 3 HOH A 102 402 47 HOH HOH . C 3 HOH A 103 403 100 HOH HOH . C 3 HOH A 104 404 90 HOH HOH . C 3 HOH A 105 405 60 HOH HOH . C 3 HOH A 106 406 112 HOH HOH . C 3 HOH A 107 407 72 HOH HOH . C 3 HOH A 108 408 144 HOH HOH . C 3 HOH A 109 409 46 HOH HOH . C 3 HOH A 110 410 186 HOH HOH . C 3 HOH A 111 411 31 HOH HOH . C 3 HOH A 112 412 79 HOH HOH . C 3 HOH A 113 413 113 HOH HOH . C 3 HOH A 114 414 101 HOH HOH . C 3 HOH A 115 415 53 HOH HOH . C 3 HOH A 116 416 67 HOH HOH . C 3 HOH A 117 417 158 HOH HOH . C 3 HOH A 118 418 92 HOH HOH . C 3 HOH A 119 419 180 HOH HOH . C 3 HOH A 120 420 76 HOH HOH . C 3 HOH A 121 421 93 HOH HOH . C 3 HOH A 122 422 51 HOH HOH . C 3 HOH A 123 423 195 HOH HOH . C 3 HOH A 124 424 49 HOH HOH . C 3 HOH A 125 425 48 HOH HOH . C 3 HOH A 126 426 55 HOH HOH . C 3 HOH A 127 427 74 HOH HOH . C 3 HOH A 128 428 42 HOH HOH . C 3 HOH A 129 429 80 HOH HOH . C 3 HOH A 130 430 30 HOH HOH . C 3 HOH A 131 431 176 HOH HOH . C 3 HOH A 132 432 52 HOH HOH . C 3 HOH A 133 433 68 HOH HOH . C 3 HOH A 134 434 24 HOH HOH . C 3 HOH A 135 435 145 HOH HOH . C 3 HOH A 136 436 193 HOH HOH . C 3 HOH A 137 437 151 HOH HOH . C 3 HOH A 138 438 91 HOH HOH . C 3 HOH A 139 439 204 HOH HOH . C 3 HOH A 140 440 140 HOH HOH . C 3 HOH A 141 441 143 HOH HOH . C 3 HOH A 142 442 85 HOH HOH . C 3 HOH A 143 443 122 HOH HOH . C 3 HOH A 144 444 57 HOH HOH . C 3 HOH A 145 445 200 HOH HOH . C 3 HOH A 146 446 129 HOH HOH . C 3 HOH A 147 447 134 HOH HOH . C 3 HOH A 148 448 189 HOH HOH . C 3 HOH A 149 449 102 HOH HOH . C 3 HOH A 150 450 181 HOH HOH . C 3 HOH A 151 451 95 HOH HOH . C 3 HOH A 152 452 114 HOH HOH . C 3 HOH A 153 453 184 HOH HOH . C 3 HOH A 154 454 192 HOH HOH . C 3 HOH A 155 455 135 HOH HOH . C 3 HOH A 156 456 170 HOH HOH . C 3 HOH A 157 457 103 HOH HOH . C 3 HOH A 158 458 126 HOH HOH . C 3 HOH A 159 459 65 HOH HOH . C 3 HOH A 160 460 23 HOH HOH . C 3 HOH A 161 461 185 HOH HOH . C 3 HOH A 162 462 13 HOH HOH . C 3 HOH A 163 463 50 HOH HOH . C 3 HOH A 164 464 168 HOH HOH . C 3 HOH A 165 465 201 HOH HOH . C 3 HOH A 166 466 152 HOH HOH . C 3 HOH A 167 467 128 HOH HOH . C 3 HOH A 168 468 70 HOH HOH . C 3 HOH A 169 469 163 HOH HOH . C 3 HOH A 170 470 187 HOH HOH . C 3 HOH A 171 471 196 HOH HOH . C 3 HOH A 172 472 109 HOH HOH . C 3 HOH A 173 473 174 HOH HOH . C 3 HOH A 174 474 124 HOH HOH . C 3 HOH A 175 475 26 HOH HOH . C 3 HOH A 176 476 171 HOH HOH . C 3 HOH A 177 477 139 HOH HOH . C 3 HOH A 178 478 73 HOH HOH . C 3 HOH A 179 479 105 HOH HOH . C 3 HOH A 180 480 202 HOH HOH . C 3 HOH A 181 481 173 HOH HOH . C 3 HOH A 182 482 149 HOH HOH . C 3 HOH A 183 483 208 HOH HOH . C 3 HOH A 184 484 99 HOH HOH . C 3 HOH A 185 485 110 HOH HOH . C 3 HOH A 186 486 132 HOH HOH . C 3 HOH A 187 487 137 HOH HOH . C 3 HOH A 188 488 209 HOH HOH . C 3 HOH A 189 489 98 HOH HOH . C 3 HOH A 190 490 177 HOH HOH . C 3 HOH A 191 491 86 HOH HOH . C 3 HOH A 192 492 155 HOH HOH . C 3 HOH A 193 493 153 HOH HOH . C 3 HOH A 194 494 175 HOH HOH . C 3 HOH A 195 495 121 HOH HOH . C 3 HOH A 196 496 206 HOH HOH . C 3 HOH A 197 497 169 HOH HOH . C 3 HOH A 198 498 71 HOH HOH . C 3 HOH A 199 499 133 HOH HOH . C 3 HOH A 200 500 197 HOH HOH . C 3 HOH A 201 501 115 HOH HOH . C 3 HOH A 202 502 164 HOH HOH . C 3 HOH A 203 503 191 HOH HOH . C 3 HOH A 204 504 182 HOH HOH . C 3 HOH A 205 505 190 HOH HOH . C 3 HOH A 206 506 205 HOH HOH . C 3 HOH A 207 507 159 HOH HOH . C 3 HOH A 208 508 150 HOH HOH . C 3 HOH A 209 509 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 WGP . . . B 2 2.295 3.361 1.201 0.8 22.59 ? N1 WGP 201 A 1 HETATM 2 C C4 WGP . . . B 2 1.244 2.942 1.93 0.8 27.27 ? C4 WGP 201 A 1 HETATM 3 C C5 WGP . . . B 2 0.5 1.834 1.524 0.8 21.59 ? C5 WGP 201 A 1 HETATM 4 C C6 WGP . . . B 2 -0.574 1.417 2.288 0.8 21.95 ? C6 WGP 201 A 1 HETATM 5 C C7 WGP . . . B 2 -0.905 2.086 3.441 0.8 12.53 ? C7 WGP 201 A 1 HETATM 6 C C8 WGP . . . B 2 -0.179 3.181 3.839 0.8 23.93 ? C8 WGP 201 A 1 HETATM 7 N N WGP . . . B 2 4.113 3.278 -1.953 0.8 29.83 ? N WGP 201 A 1 HETATM 8 C C WGP . . . B 2 5.098 4.017 -2.732 0.8 30.42 ? C WGP 201 A 1 HETATM 9 O O WGP . . . B 2 3.989 4.827 -0.368 0.8 35.31 ? O WGP 201 A 1 HETATM 10 C C1 WGP . . . B 2 3.696 1.956 -2.394 0.8 22.44 ? C1 WGP 201 A 1 HETATM 11 C C2 WGP . . . B 2 3.606 3.768 -0.852 0.8 31.07 ? C2 WGP 201 A 1 HETATM 12 C C3 WGP . . . B 2 2.526 2.946 -0.156 0.8 25.6 ? C3 WGP 201 A 1 HETATM 13 C C9 WGP . . . B 2 0.9 3.619 3.094 0.8 28.89 ? C9 WGP 201 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #