data_9F4N # _model_server_result.job_id tZzAfZBgEJrtmkWvFvgIVQ _model_server_result.datetime_utc '2024-10-10 08:22:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f4n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9F4N # _exptl.entry_id 9F4N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 246.348 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[4-(3-phenylpropyl)piperazin-1-yl]ethan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.1 _cell.angle_gamma 90 _cell.entry_id 9F4N _cell.length_a 38.054 _cell.length_b 43.909 _cell.length_c 56.043 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F4N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H22 N2 O' _chem_comp.formula_weight 246.348 _chem_comp.id O3J _chem_comp.mon_nstd_flag . _chem_comp.name 1-[4-(3-phenylpropyl)piperazin-1-yl]ethan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C10 O3J doub 237 n y C9 C8 O3J sing 238 n y C10 C11 O3J sing 239 n y C8 C7 O3J doub 240 n y C11 C12 O3J doub 241 n y C7 C12 O3J sing 242 n y C7 C6 O3J sing 243 n n C6 C5 O3J sing 244 n n C5 C4 O3J sing 245 n n N1 C4 O3J sing 246 n n N1 C3 O3J sing 247 n n N1 C13 O3J sing 248 n n C3 C2 O3J sing 249 n n C13 C14 O3J sing 250 n n C2 N O3J sing 251 n n C14 N O3J sing 252 n n N C1 O3J sing 253 n n C1 O O3J doub 254 n n C1 C O3J sing 255 n n C4 H2 O3J sing 256 n n C4 H3 O3J sing 257 n n C5 H4 O3J sing 258 n n C5 H5 O3J sing 259 n n C6 H6 O3J sing 260 n n C6 H7 O3J sing 261 n n C8 H8 O3J sing 262 n n C10 H9 O3J sing 263 n n C13 H10 O3J sing 264 n n C13 H11 O3J sing 265 n n C H12 O3J sing 266 n n C H13 O3J sing 267 n n C H14 O3J sing 268 n n C11 H15 O3J sing 269 n n C12 H16 O3J sing 270 n n C14 H17 O3J sing 271 n n C14 H18 O3J sing 272 n n C2 H19 O3J sing 273 n n C2 H20 O3J sing 274 n n C3 H21 O3J sing 275 n n C3 H22 O3J sing 276 n n C9 H23 O3J sing 277 n n # _atom_sites.entry_id 9F4N _atom_sites.fract_transf_matrix[1][1] 0.026278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001884 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022774 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 O3J A 1 201 1 O3J LIG . C 3 HOH A 1 301 132 HOH HOH . C 3 HOH A 2 302 138 HOH HOH . C 3 HOH A 3 303 169 HOH HOH . C 3 HOH A 4 304 101 HOH HOH . C 3 HOH A 5 305 144 HOH HOH . C 3 HOH A 6 306 103 HOH HOH . C 3 HOH A 7 307 86 HOH HOH . C 3 HOH A 8 308 225 HOH HOH . C 3 HOH A 9 309 124 HOH HOH . C 3 HOH A 10 310 90 HOH HOH . C 3 HOH A 11 311 64 HOH HOH . C 3 HOH A 12 312 69 HOH HOH . C 3 HOH A 13 313 63 HOH HOH . C 3 HOH A 14 314 92 HOH HOH . C 3 HOH A 15 315 94 HOH HOH . C 3 HOH A 16 316 1 HOH HOH . C 3 HOH A 17 317 112 HOH HOH . C 3 HOH A 18 318 21 HOH HOH . C 3 HOH A 19 319 164 HOH HOH . C 3 HOH A 20 320 29 HOH HOH . C 3 HOH A 21 321 44 HOH HOH . C 3 HOH A 22 322 201 HOH HOH . C 3 HOH A 23 323 48 HOH HOH . C 3 HOH A 24 324 9 HOH HOH . C 3 HOH A 25 325 78 HOH HOH . C 3 HOH A 26 326 28 HOH HOH . C 3 HOH A 27 327 105 HOH HOH . C 3 HOH A 28 328 145 HOH HOH . C 3 HOH A 29 329 222 HOH HOH . C 3 HOH A 30 330 210 HOH HOH . C 3 HOH A 31 331 17 HOH HOH . C 3 HOH A 32 332 12 HOH HOH . C 3 HOH A 33 333 58 HOH HOH . C 3 HOH A 34 334 150 HOH HOH . C 3 HOH A 35 335 3 HOH HOH . C 3 HOH A 36 336 83 HOH HOH . C 3 HOH A 37 337 23 HOH HOH . C 3 HOH A 38 338 8 HOH HOH . C 3 HOH A 39 339 158 HOH HOH . C 3 HOH A 40 340 52 HOH HOH . C 3 HOH A 41 341 97 HOH HOH . C 3 HOH A 42 342 106 HOH HOH . C 3 HOH A 43 343 213 HOH HOH . C 3 HOH A 44 344 7 HOH HOH . C 3 HOH A 45 345 5 HOH HOH . C 3 HOH A 46 346 4 HOH HOH . C 3 HOH A 47 347 215 HOH HOH . C 3 HOH A 48 348 68 HOH HOH . C 3 HOH A 49 349 37 HOH HOH . C 3 HOH A 50 350 6 HOH HOH . C 3 HOH A 51 351 82 HOH HOH . C 3 HOH A 52 352 74 HOH HOH . C 3 HOH A 53 353 18 HOH HOH . C 3 HOH A 54 354 38 HOH HOH . C 3 HOH A 55 355 47 HOH HOH . C 3 HOH A 56 356 39 HOH HOH . C 3 HOH A 57 357 15 HOH HOH . C 3 HOH A 58 358 11 HOH HOH . C 3 HOH A 59 359 16 HOH HOH . C 3 HOH A 60 360 19 HOH HOH . C 3 HOH A 61 361 147 HOH HOH . C 3 HOH A 62 362 45 HOH HOH . C 3 HOH A 63 363 148 HOH HOH . C 3 HOH A 64 364 66 HOH HOH . C 3 HOH A 65 365 14 HOH HOH . C 3 HOH A 66 366 36 HOH HOH . C 3 HOH A 67 367 209 HOH HOH . C 3 HOH A 68 368 212 HOH HOH . C 3 HOH A 69 369 174 HOH HOH . C 3 HOH A 70 370 53 HOH HOH . C 3 HOH A 71 371 33 HOH HOH . C 3 HOH A 72 372 30 HOH HOH . C 3 HOH A 73 373 224 HOH HOH . C 3 HOH A 74 374 128 HOH HOH . C 3 HOH A 75 375 156 HOH HOH . C 3 HOH A 76 376 126 HOH HOH . C 3 HOH A 77 377 49 HOH HOH . C 3 HOH A 78 378 26 HOH HOH . C 3 HOH A 79 379 100 HOH HOH . C 3 HOH A 80 380 50 HOH HOH . C 3 HOH A 81 381 2 HOH HOH . C 3 HOH A 82 382 178 HOH HOH . C 3 HOH A 83 383 217 HOH HOH . C 3 HOH A 84 384 35 HOH HOH . C 3 HOH A 85 385 40 HOH HOH . C 3 HOH A 86 386 183 HOH HOH . C 3 HOH A 87 387 219 HOH HOH . C 3 HOH A 88 388 61 HOH HOH . C 3 HOH A 89 389 57 HOH HOH . C 3 HOH A 90 390 193 HOH HOH . C 3 HOH A 91 391 171 HOH HOH . C 3 HOH A 92 392 20 HOH HOH . C 3 HOH A 93 393 85 HOH HOH . C 3 HOH A 94 394 142 HOH HOH . C 3 HOH A 95 395 46 HOH HOH . C 3 HOH A 96 396 114 HOH HOH . C 3 HOH A 97 397 27 HOH HOH . C 3 HOH A 98 398 120 HOH HOH . C 3 HOH A 99 399 10 HOH HOH . C 3 HOH A 100 400 60 HOH HOH . C 3 HOH A 101 401 81 HOH HOH . C 3 HOH A 102 402 121 HOH HOH . C 3 HOH A 103 403 140 HOH HOH . C 3 HOH A 104 404 54 HOH HOH . C 3 HOH A 105 405 141 HOH HOH . C 3 HOH A 106 406 88 HOH HOH . C 3 HOH A 107 407 34 HOH HOH . C 3 HOH A 108 408 116 HOH HOH . C 3 HOH A 109 409 25 HOH HOH . C 3 HOH A 110 410 59 HOH HOH . C 3 HOH A 111 411 24 HOH HOH . C 3 HOH A 112 412 32 HOH HOH . C 3 HOH A 113 413 104 HOH HOH . C 3 HOH A 114 414 207 HOH HOH . C 3 HOH A 115 415 22 HOH HOH . C 3 HOH A 116 416 123 HOH HOH . C 3 HOH A 117 417 117 HOH HOH . C 3 HOH A 118 418 41 HOH HOH . C 3 HOH A 119 419 13 HOH HOH . C 3 HOH A 120 420 67 HOH HOH . C 3 HOH A 121 421 76 HOH HOH . C 3 HOH A 122 422 146 HOH HOH . C 3 HOH A 123 423 31 HOH HOH . C 3 HOH A 124 424 75 HOH HOH . C 3 HOH A 125 425 51 HOH HOH . C 3 HOH A 126 426 113 HOH HOH . C 3 HOH A 127 427 184 HOH HOH . C 3 HOH A 128 428 42 HOH HOH . C 3 HOH A 129 429 56 HOH HOH . C 3 HOH A 130 430 93 HOH HOH . C 3 HOH A 131 431 70 HOH HOH . C 3 HOH A 132 432 79 HOH HOH . C 3 HOH A 133 433 232 HOH HOH . C 3 HOH A 134 434 108 HOH HOH . C 3 HOH A 135 435 71 HOH HOH . C 3 HOH A 136 436 135 HOH HOH . C 3 HOH A 137 437 167 HOH HOH . C 3 HOH A 138 438 194 HOH HOH . C 3 HOH A 139 439 177 HOH HOH . C 3 HOH A 140 440 115 HOH HOH . C 3 HOH A 141 441 43 HOH HOH . C 3 HOH A 142 442 109 HOH HOH . C 3 HOH A 143 443 203 HOH HOH . C 3 HOH A 144 444 214 HOH HOH . C 3 HOH A 145 445 175 HOH HOH . C 3 HOH A 146 446 230 HOH HOH . C 3 HOH A 147 447 154 HOH HOH . C 3 HOH A 148 448 159 HOH HOH . C 3 HOH A 149 449 161 HOH HOH . C 3 HOH A 150 450 157 HOH HOH . C 3 HOH A 151 451 89 HOH HOH . C 3 HOH A 152 452 96 HOH HOH . C 3 HOH A 153 453 65 HOH HOH . C 3 HOH A 154 454 162 HOH HOH . C 3 HOH A 155 455 111 HOH HOH . C 3 HOH A 156 456 165 HOH HOH . C 3 HOH A 157 457 170 HOH HOH . C 3 HOH A 158 458 91 HOH HOH . C 3 HOH A 159 459 166 HOH HOH . C 3 HOH A 160 460 137 HOH HOH . C 3 HOH A 161 461 107 HOH HOH . C 3 HOH A 162 462 192 HOH HOH . C 3 HOH A 163 463 229 HOH HOH . C 3 HOH A 164 464 98 HOH HOH . C 3 HOH A 165 465 55 HOH HOH . C 3 HOH A 166 466 211 HOH HOH . C 3 HOH A 167 467 102 HOH HOH . C 3 HOH A 168 468 185 HOH HOH . C 3 HOH A 169 469 62 HOH HOH . C 3 HOH A 170 470 182 HOH HOH . C 3 HOH A 171 471 228 HOH HOH . C 3 HOH A 172 472 208 HOH HOH . C 3 HOH A 173 473 216 HOH HOH . C 3 HOH A 174 474 72 HOH HOH . C 3 HOH A 175 475 189 HOH HOH . C 3 HOH A 176 476 198 HOH HOH . C 3 HOH A 177 477 127 HOH HOH . C 3 HOH A 178 478 119 HOH HOH . C 3 HOH A 179 479 227 HOH HOH . C 3 HOH A 180 480 153 HOH HOH . C 3 HOH A 181 481 99 HOH HOH . C 3 HOH A 182 482 77 HOH HOH . C 3 HOH A 183 483 231 HOH HOH . C 3 HOH A 184 484 205 HOH HOH . C 3 HOH A 185 485 151 HOH HOH . C 3 HOH A 186 486 80 HOH HOH . C 3 HOH A 187 487 206 HOH HOH . C 3 HOH A 188 488 168 HOH HOH . C 3 HOH A 189 489 133 HOH HOH . C 3 HOH A 190 490 139 HOH HOH . C 3 HOH A 191 491 118 HOH HOH . C 3 HOH A 192 492 191 HOH HOH . C 3 HOH A 193 493 200 HOH HOH . C 3 HOH A 194 494 195 HOH HOH . C 3 HOH A 195 495 84 HOH HOH . C 3 HOH A 196 496 131 HOH HOH . C 3 HOH A 197 497 186 HOH HOH . C 3 HOH A 198 498 87 HOH HOH . C 3 HOH A 199 499 220 HOH HOH . C 3 HOH A 200 500 187 HOH HOH . C 3 HOH A 201 501 155 HOH HOH . C 3 HOH A 202 502 221 HOH HOH . C 3 HOH A 203 503 197 HOH HOH . C 3 HOH A 204 504 143 HOH HOH . C 3 HOH A 205 505 218 HOH HOH . C 3 HOH A 206 506 73 HOH HOH . C 3 HOH A 207 507 176 HOH HOH . C 3 HOH A 208 508 202 HOH HOH . C 3 HOH A 209 509 134 HOH HOH . C 3 HOH A 210 510 188 HOH HOH . C 3 HOH A 211 511 125 HOH HOH . C 3 HOH A 212 512 95 HOH HOH . C 3 HOH A 213 513 136 HOH HOH . C 3 HOH A 214 514 172 HOH HOH . C 3 HOH A 215 515 129 HOH HOH . C 3 HOH A 216 516 160 HOH HOH . C 3 HOH A 217 517 196 HOH HOH . C 3 HOH A 218 518 163 HOH HOH . C 3 HOH A 219 519 152 HOH HOH . C 3 HOH A 220 520 181 HOH HOH . C 3 HOH A 221 521 190 HOH HOH . C 3 HOH A 222 522 149 HOH HOH . C 3 HOH A 223 523 223 HOH HOH . C 3 HOH A 224 524 130 HOH HOH . C 3 HOH A 225 525 179 HOH HOH . C 3 HOH A 226 526 180 HOH HOH . C 3 HOH A 227 527 110 HOH HOH . C 3 HOH A 228 528 204 HOH HOH . C 3 HOH A 229 529 173 HOH HOH . C 3 HOH A 230 530 122 HOH HOH . C 3 HOH A 231 531 226 HOH HOH . C 3 HOH A 232 532 199 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 O3J . . . B 2 -17.839 -7.91 8.712 0.57 36.85 ? N1 O3J 201 A 1 HETATM 2 C C4 O3J . . . B 2 -19.267 -7.895 8.37 0.57 27.78 ? C4 O3J 201 A 1 HETATM 3 C C5 O3J . . . B 2 -19.607 -7.141 7.093 0.57 28.41 ? C5 O3J 201 A 1 HETATM 4 C C6 O3J . . . B 2 -20.918 -7.654 6.475 0.57 26.86 ? C6 O3J 201 A 1 HETATM 5 C C7 O3J . . . B 2 -21.272 -7.056 5.136 0.57 22.34 ? C7 O3J 201 A 1 HETATM 6 C C8 O3J . . . B 2 -21.088 -5.705 4.885 0.57 19.76 ? C8 O3J 201 A 1 HETATM 7 C C10 O3J . . . B 2 -21.957 -5.958 2.672 0.57 13.73 ? C10 O3J 201 A 1 HETATM 8 C C13 O3J . . . B 2 -17.568 -9.023 9.64 0.57 34.81 ? C13 O3J 201 A 1 HETATM 9 N N O3J . . . B 2 -15.268 -9.056 8.883 0.57 36.66 ? N O3J 201 A 1 HETATM 10 C C O3J . . . B 2 -12.939 -8.361 9.148 0.57 28.19 ? C O3J 201 A 1 HETATM 11 O O O3J . . . B 2 -14.019 -9.989 10.486 0.57 42.05 ? O O3J 201 A 1 HETATM 12 C C1 O3J . . . B 2 -14.109 -9.201 9.551 0.57 36.75 ? C1 O3J 201 A 1 HETATM 13 C C11 O3J . . . B 2 -22.148 -7.299 2.905 0.57 22.67 ? C11 O3J 201 A 1 HETATM 14 C C12 O3J . . . B 2 -21.812 -7.845 4.134 0.57 21.66 ? C12 O3J 201 A 1 HETATM 15 C C14 O3J . . . B 2 -16.431 -9.894 9.157 0.57 33.24 ? C14 O3J 201 A 1 HETATM 16 C C2 O3J . . . B 2 -15.535 -8.045 7.86 0.57 29.54 ? C2 O3J 201 A 1 HETATM 17 C C3 O3J . . . B 2 -17.005 -8.043 7.503 0.57 30.18 ? C3 O3J 201 A 1 HETATM 18 C C9 O3J . . . B 2 -21.431 -5.159 3.659 0.57 15.06 ? C9 O3J 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #