data_9F50 # _model_server_result.job_id PehGPLvRvPQYQyjp4wYzDg _model_server_result.datetime_utc '2024-11-26 02:51:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f50 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9F50 # _exptl.entry_id 9F50 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 199.637 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-chloro-2-(propan-2-yl)pyrimidine-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.36 _cell.angle_gamma 90 _cell.entry_id 9F50 _cell.length_a 38.019 _cell.length_b 43.907 _cell.length_c 56.168 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H10 Cl N3 O' _chem_comp.formula_weight 199.637 _chem_comp.id K2G _chem_comp.mon_nstd_flag . _chem_comp.name 5-chloro-2-(propan-2-yl)pyrimidine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 K2G sing 173 n n C1 C2 K2G sing 174 n n C1 C3 K2G sing 175 n n N C3 K2G doub 176 n y N C4 K2G sing 177 n y C3 N1 K2G sing 178 n y C4 C5 K2G doub 179 n y N1 C6 K2G doub 180 n y C5 C6 K2G sing 181 n y C5 CL K2G sing 182 n n C6 C7 K2G sing 183 n n N2 C7 K2G sing 184 n n C7 O K2G doub 185 n n C4 H1 K2G sing 186 n n C H2 K2G sing 187 n n C H3 K2G sing 188 n n C H4 K2G sing 189 n n C1 H5 K2G sing 190 n n C2 H6 K2G sing 191 n n C2 H7 K2G sing 192 n n C2 H8 K2G sing 193 n n N2 H9 K2G sing 194 n n N2 H10 K2G sing 195 n n # _atom_sites.entry_id 9F50 _atom_sites.fract_transf_matrix[1][1] 0.026303 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002005 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017855 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K2G A 1 201 2 K2G LIG . C 3 HOH A 1 301 155 HOH HOH . C 3 HOH A 2 302 117 HOH HOH . C 3 HOH A 3 303 115 HOH HOH . C 3 HOH A 4 304 171 HOH HOH . C 3 HOH A 5 305 62 HOH HOH . C 3 HOH A 6 306 83 HOH HOH . C 3 HOH A 7 307 177 HOH HOH . C 3 HOH A 8 308 166 HOH HOH . C 3 HOH A 9 309 114 HOH HOH . C 3 HOH A 10 310 107 HOH HOH . C 3 HOH A 11 311 48 HOH HOH . C 3 HOH A 12 312 21 HOH HOH . C 3 HOH A 13 313 84 HOH HOH . C 3 HOH A 14 314 75 HOH HOH . C 3 HOH A 15 315 77 HOH HOH . C 3 HOH A 16 316 42 HOH HOH . C 3 HOH A 17 317 150 HOH HOH . C 3 HOH A 18 318 2 HOH HOH . C 3 HOH A 19 319 67 HOH HOH . C 3 HOH A 20 320 175 HOH HOH . C 3 HOH A 21 321 56 HOH HOH . C 3 HOH A 22 322 59 HOH HOH . C 3 HOH A 23 323 1 HOH HOH . C 3 HOH A 24 324 93 HOH HOH . C 3 HOH A 25 325 36 HOH HOH . C 3 HOH A 26 326 46 HOH HOH . C 3 HOH A 27 327 45 HOH HOH . C 3 HOH A 28 328 10 HOH HOH . C 3 HOH A 29 329 14 HOH HOH . C 3 HOH A 30 330 70 HOH HOH . C 3 HOH A 31 331 11 HOH HOH . C 3 HOH A 32 332 130 HOH HOH . C 3 HOH A 33 333 7 HOH HOH . C 3 HOH A 34 334 106 HOH HOH . C 3 HOH A 35 335 5 HOH HOH . C 3 HOH A 36 336 60 HOH HOH . C 3 HOH A 37 337 124 HOH HOH . C 3 HOH A 38 338 24 HOH HOH . C 3 HOH A 39 339 94 HOH HOH . C 3 HOH A 40 340 105 HOH HOH . C 3 HOH A 41 341 50 HOH HOH . C 3 HOH A 42 342 113 HOH HOH . C 3 HOH A 43 343 13 HOH HOH . C 3 HOH A 44 344 3 HOH HOH . C 3 HOH A 45 345 34 HOH HOH . C 3 HOH A 46 346 125 HOH HOH . C 3 HOH A 47 347 132 HOH HOH . C 3 HOH A 48 348 99 HOH HOH . C 3 HOH A 49 349 151 HOH HOH . C 3 HOH A 50 350 61 HOH HOH . C 3 HOH A 51 351 47 HOH HOH . C 3 HOH A 52 352 79 HOH HOH . C 3 HOH A 53 353 12 HOH HOH . C 3 HOH A 54 354 6 HOH HOH . C 3 HOH A 55 355 102 HOH HOH . C 3 HOH A 56 356 43 HOH HOH . C 3 HOH A 57 357 20 HOH HOH . C 3 HOH A 58 358 53 HOH HOH . C 3 HOH A 59 359 9 HOH HOH . C 3 HOH A 60 360 29 HOH HOH . C 3 HOH A 61 361 26 HOH HOH . C 3 HOH A 62 362 33 HOH HOH . C 3 HOH A 63 363 8 HOH HOH . C 3 HOH A 64 364 163 HOH HOH . C 3 HOH A 65 365 104 HOH HOH . C 3 HOH A 66 366 128 HOH HOH . C 3 HOH A 67 367 37 HOH HOH . C 3 HOH A 68 368 16 HOH HOH . C 3 HOH A 69 369 44 HOH HOH . C 3 HOH A 70 370 25 HOH HOH . C 3 HOH A 71 371 55 HOH HOH . C 3 HOH A 72 372 15 HOH HOH . C 3 HOH A 73 373 108 HOH HOH . C 3 HOH A 74 374 161 HOH HOH . C 3 HOH A 75 375 30 HOH HOH . C 3 HOH A 76 376 66 HOH HOH . C 3 HOH A 77 377 19 HOH HOH . C 3 HOH A 78 378 27 HOH HOH . C 3 HOH A 79 379 148 HOH HOH . C 3 HOH A 80 380 4 HOH HOH . C 3 HOH A 81 381 158 HOH HOH . C 3 HOH A 82 382 40 HOH HOH . C 3 HOH A 83 383 121 HOH HOH . C 3 HOH A 84 384 137 HOH HOH . C 3 HOH A 85 385 73 HOH HOH . C 3 HOH A 86 386 74 HOH HOH . C 3 HOH A 87 387 71 HOH HOH . C 3 HOH A 88 388 133 HOH HOH . C 3 HOH A 89 389 90 HOH HOH . C 3 HOH A 90 390 38 HOH HOH . C 3 HOH A 91 391 78 HOH HOH . C 3 HOH A 92 392 22 HOH HOH . C 3 HOH A 93 393 63 HOH HOH . C 3 HOH A 94 394 32 HOH HOH . C 3 HOH A 95 395 142 HOH HOH . C 3 HOH A 96 396 131 HOH HOH . C 3 HOH A 97 397 41 HOH HOH . C 3 HOH A 98 398 58 HOH HOH . C 3 HOH A 99 399 98 HOH HOH . C 3 HOH A 100 400 80 HOH HOH . C 3 HOH A 101 401 87 HOH HOH . C 3 HOH A 102 402 96 HOH HOH . C 3 HOH A 103 403 144 HOH HOH . C 3 HOH A 104 404 23 HOH HOH . C 3 HOH A 105 405 35 HOH HOH . C 3 HOH A 106 406 109 HOH HOH . C 3 HOH A 107 407 82 HOH HOH . C 3 HOH A 108 408 54 HOH HOH . C 3 HOH A 109 409 31 HOH HOH . C 3 HOH A 110 410 145 HOH HOH . C 3 HOH A 111 411 169 HOH HOH . C 3 HOH A 112 412 134 HOH HOH . C 3 HOH A 113 413 129 HOH HOH . C 3 HOH A 114 414 68 HOH HOH . C 3 HOH A 115 415 51 HOH HOH . C 3 HOH A 116 416 111 HOH HOH . C 3 HOH A 117 417 52 HOH HOH . C 3 HOH A 118 418 153 HOH HOH . C 3 HOH A 119 419 147 HOH HOH . C 3 HOH A 120 420 49 HOH HOH . C 3 HOH A 121 421 18 HOH HOH . C 3 HOH A 122 422 91 HOH HOH . C 3 HOH A 123 423 57 HOH HOH . C 3 HOH A 124 424 182 HOH HOH . C 3 HOH A 125 425 110 HOH HOH . C 3 HOH A 126 426 39 HOH HOH . C 3 HOH A 127 427 160 HOH HOH . C 3 HOH A 128 428 69 HOH HOH . C 3 HOH A 129 429 112 HOH HOH . C 3 HOH A 130 430 120 HOH HOH . C 3 HOH A 131 431 64 HOH HOH . C 3 HOH A 132 432 138 HOH HOH . C 3 HOH A 133 433 92 HOH HOH . C 3 HOH A 134 434 17 HOH HOH . C 3 HOH A 135 435 95 HOH HOH . C 3 HOH A 136 436 85 HOH HOH . C 3 HOH A 137 437 135 HOH HOH . C 3 HOH A 138 438 100 HOH HOH . C 3 HOH A 139 439 185 HOH HOH . C 3 HOH A 140 440 154 HOH HOH . C 3 HOH A 141 441 86 HOH HOH . C 3 HOH A 142 442 88 HOH HOH . C 3 HOH A 143 443 116 HOH HOH . C 3 HOH A 144 444 97 HOH HOH . C 3 HOH A 145 445 140 HOH HOH . C 3 HOH A 146 446 170 HOH HOH . C 3 HOH A 147 447 184 HOH HOH . C 3 HOH A 148 448 156 HOH HOH . C 3 HOH A 149 449 72 HOH HOH . C 3 HOH A 150 450 183 HOH HOH . C 3 HOH A 151 451 149 HOH HOH . C 3 HOH A 152 452 178 HOH HOH . C 3 HOH A 153 453 187 HOH HOH . C 3 HOH A 154 454 146 HOH HOH . C 3 HOH A 155 455 162 HOH HOH . C 3 HOH A 156 456 181 HOH HOH . C 3 HOH A 157 457 126 HOH HOH . C 3 HOH A 158 458 28 HOH HOH . C 3 HOH A 159 459 118 HOH HOH . C 3 HOH A 160 460 76 HOH HOH . C 3 HOH A 161 461 103 HOH HOH . C 3 HOH A 162 462 179 HOH HOH . C 3 HOH A 163 463 122 HOH HOH . C 3 HOH A 164 464 152 HOH HOH . C 3 HOH A 165 465 174 HOH HOH . C 3 HOH A 166 466 65 HOH HOH . C 3 HOH A 167 467 127 HOH HOH . C 3 HOH A 168 468 164 HOH HOH . C 3 HOH A 169 469 143 HOH HOH . C 3 HOH A 170 470 186 HOH HOH . C 3 HOH A 171 471 157 HOH HOH . C 3 HOH A 172 472 81 HOH HOH . C 3 HOH A 173 473 141 HOH HOH . C 3 HOH A 174 474 119 HOH HOH . C 3 HOH A 175 475 173 HOH HOH . C 3 HOH A 176 476 189 HOH HOH . C 3 HOH A 177 477 123 HOH HOH . C 3 HOH A 178 478 159 HOH HOH . C 3 HOH A 179 479 136 HOH HOH . C 3 HOH A 180 480 89 HOH HOH . C 3 HOH A 181 481 168 HOH HOH . C 3 HOH A 182 482 176 HOH HOH . C 3 HOH A 183 483 188 HOH HOH . C 3 HOH A 184 484 172 HOH HOH . C 3 HOH A 185 485 139 HOH HOH . C 3 HOH A 186 486 180 HOH HOH . C 3 HOH A 187 487 101 HOH HOH . C 3 HOH A 188 488 165 HOH HOH . C 3 HOH A 189 489 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 K2G . . . B 2 -0.868 -15.148 22.867 0.68 31.19 ? N1 K2G 201 A 1 HETATM 2 C C4 K2G . . . B 2 -1.566 -14.282 25.347 0.68 30.18 ? C4 K2G 201 A 1 HETATM 3 C C5 K2G . . . B 2 -2.26 -13.811 24.243 0.68 29.79 ? C5 K2G 201 A 1 HETATM 4 C C6 K2G . . . B 2 -1.877 -14.277 22.998 0.68 30.79 ? C6 K2G 201 A 1 HETATM 5 C C7 K2G . . . B 2 -2.576 -13.813 21.755 0.68 25.55 ? C7 K2G 201 A 1 HETATM 6 N N K2G . . . B 2 -0.557 -15.152 25.219 0.68 36.07 ? N K2G 201 A 1 HETATM 7 C C K2G . . . B 2 1.245 -17.217 25.145 0.68 42.96 ? C K2G 201 A 1 HETATM 8 O O K2G . . . B 2 -3.415 -12.909 21.811 0.68 22.32 ? O K2G 201 A 1 HETATM 9 C C1 K2G . . . B 2 0.9 -16.54 23.82 0.68 38.68 ? C1 K2G 201 A 1 HETATM 10 C C2 K2G . . . B 2 0.604 -17.582 22.745 0.68 36.75 ? C2 K2G 201 A 1 HETATM 11 C C3 K2G . . . B 2 -0.245 -15.556 23.975 0.68 30.97 ? C3 K2G 201 A 1 HETATM 12 N N2 K2G . . . B 2 -2.227 -14.422 20.638 0.68 36.9 ? N2 K2G 201 A 1 HETATM 13 CL CL K2G . . . B 2 -3.562 -12.689 24.457 0.68 45.98 ? CL K2G 201 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 13 #