data_9F52 # _model_server_result.job_id RoN0iR3umMvyxr38yuE9bg _model_server_result.datetime_utc '2024-11-27 20:53:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f52 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9F52 # _exptl.entry_id 9F52 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 145.199 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-(methylamino)oxan-4-yl]methanol' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.38 _cell.angle_gamma 90 _cell.entry_id 9F52 _cell.length_a 38.056 _cell.length_b 44.029 _cell.length_c 56.055 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F52 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H15 N O2' _chem_comp.formula_weight 145.199 _chem_comp.id A1H9W _chem_comp.mon_nstd_flag . _chem_comp.name '[4-(methylamino)oxan-4-yl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 A1H9W sing 1 n n N1 C2 A1H9W sing 2 n n C2 C3 A1H9W sing 3 n n C3 O1 A1H9W sing 4 n n C2 C4 A1H9W sing 5 n n C4 C5 A1H9W sing 6 n n C5 O2 A1H9W sing 7 n n O2 C6 A1H9W sing 8 n n C6 C7 A1H9W sing 9 n n C2 C7 A1H9W sing 10 n n N1 H4 A1H9W sing 11 n n C4 H9 A1H9W sing 12 n n C4 H8 A1H9W sing 13 n n C5 H11 A1H9W sing 14 n n C5 H10 A1H9W sing 15 n n C6 H13 A1H9W sing 16 n n C6 H12 A1H9W sing 17 n n C7 H15 A1H9W sing 18 n n C7 H14 A1H9W sing 19 n n C1 H1 A1H9W sing 20 n n C1 H3 A1H9W sing 21 n n C1 H2 A1H9W sing 22 n n C3 H6 A1H9W sing 23 n n C3 H5 A1H9W sing 24 n n O1 H7 A1H9W sing 25 n n # _atom_sites.entry_id 9F52 _atom_sites.fract_transf_matrix[1][1] 0.026277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002013 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022712 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1H9W A 1 201 1 A1H9W LIG . C 3 HOH A 1 301 196 HOH HOH . C 3 HOH A 2 302 122 HOH HOH . C 3 HOH A 3 303 193 HOH HOH . C 3 HOH A 4 304 187 HOH HOH . C 3 HOH A 5 305 66 HOH HOH . C 3 HOH A 6 306 69 HOH HOH . C 3 HOH A 7 307 156 HOH HOH . C 3 HOH A 8 308 86 HOH HOH . C 3 HOH A 9 309 189 HOH HOH . C 3 HOH A 10 310 192 HOH HOH . C 3 HOH A 11 311 169 HOH HOH . C 3 HOH A 12 312 67 HOH HOH . C 3 HOH A 13 313 167 HOH HOH . C 3 HOH A 14 314 33 HOH HOH . C 3 HOH A 15 315 71 HOH HOH . C 3 HOH A 16 316 158 HOH HOH . C 3 HOH A 17 317 64 HOH HOH . C 3 HOH A 18 318 105 HOH HOH . C 3 HOH A 19 319 104 HOH HOH . C 3 HOH A 20 320 91 HOH HOH . C 3 HOH A 21 321 134 HOH HOH . C 3 HOH A 22 322 111 HOH HOH . C 3 HOH A 23 323 194 HOH HOH . C 3 HOH A 24 324 94 HOH HOH . C 3 HOH A 25 325 126 HOH HOH . C 3 HOH A 26 326 124 HOH HOH . C 3 HOH A 27 327 3 HOH HOH . C 3 HOH A 28 328 55 HOH HOH . C 3 HOH A 29 329 201 HOH HOH . C 3 HOH A 30 330 52 HOH HOH . C 3 HOH A 31 331 34 HOH HOH . C 3 HOH A 32 332 74 HOH HOH . C 3 HOH A 33 333 4 HOH HOH . C 3 HOH A 34 334 203 HOH HOH . C 3 HOH A 35 335 13 HOH HOH . C 3 HOH A 36 336 152 HOH HOH . C 3 HOH A 37 337 79 HOH HOH . C 3 HOH A 38 338 110 HOH HOH . C 3 HOH A 39 339 58 HOH HOH . C 3 HOH A 40 340 19 HOH HOH . C 3 HOH A 41 341 27 HOH HOH . C 3 HOH A 42 342 85 HOH HOH . C 3 HOH A 43 343 14 HOH HOH . C 3 HOH A 44 344 5 HOH HOH . C 3 HOH A 45 345 65 HOH HOH . C 3 HOH A 46 346 95 HOH HOH . C 3 HOH A 47 347 59 HOH HOH . C 3 HOH A 48 348 145 HOH HOH . C 3 HOH A 49 349 12 HOH HOH . C 3 HOH A 50 350 9 HOH HOH . C 3 HOH A 51 351 129 HOH HOH . C 3 HOH A 52 352 54 HOH HOH . C 3 HOH A 53 353 1 HOH HOH . C 3 HOH A 54 354 92 HOH HOH . C 3 HOH A 55 355 15 HOH HOH . C 3 HOH A 56 356 6 HOH HOH . C 3 HOH A 57 357 211 HOH HOH . C 3 HOH A 58 358 47 HOH HOH . C 3 HOH A 59 359 24 HOH HOH . C 3 HOH A 60 360 7 HOH HOH . C 3 HOH A 61 361 18 HOH HOH . C 3 HOH A 62 362 51 HOH HOH . C 3 HOH A 63 363 21 HOH HOH . C 3 HOH A 64 364 88 HOH HOH . C 3 HOH A 65 365 37 HOH HOH . C 3 HOH A 66 366 10 HOH HOH . C 3 HOH A 67 367 36 HOH HOH . C 3 HOH A 68 368 8 HOH HOH . C 3 HOH A 69 369 40 HOH HOH . C 3 HOH A 70 370 163 HOH HOH . C 3 HOH A 71 371 114 HOH HOH . C 3 HOH A 72 372 174 HOH HOH . C 3 HOH A 73 373 50 HOH HOH . C 3 HOH A 74 374 28 HOH HOH . C 3 HOH A 75 375 32 HOH HOH . C 3 HOH A 76 376 23 HOH HOH . C 3 HOH A 77 377 31 HOH HOH . C 3 HOH A 78 378 80 HOH HOH . C 3 HOH A 79 379 35 HOH HOH . C 3 HOH A 80 380 61 HOH HOH . C 3 HOH A 81 381 106 HOH HOH . C 3 HOH A 82 382 29 HOH HOH . C 3 HOH A 83 383 177 HOH HOH . C 3 HOH A 84 384 83 HOH HOH . C 3 HOH A 85 385 149 HOH HOH . C 3 HOH A 86 386 11 HOH HOH . C 3 HOH A 87 387 17 HOH HOH . C 3 HOH A 88 388 2 HOH HOH . C 3 HOH A 89 389 202 HOH HOH . C 3 HOH A 90 390 101 HOH HOH . C 3 HOH A 91 391 205 HOH HOH . C 3 HOH A 92 392 43 HOH HOH . C 3 HOH A 93 393 166 HOH HOH . C 3 HOH A 94 394 216 HOH HOH . C 3 HOH A 95 395 39 HOH HOH . C 3 HOH A 96 396 30 HOH HOH . C 3 HOH A 97 397 81 HOH HOH . C 3 HOH A 98 398 118 HOH HOH . C 3 HOH A 99 399 128 HOH HOH . C 3 HOH A 100 400 84 HOH HOH . C 3 HOH A 101 401 195 HOH HOH . C 3 HOH A 102 402 102 HOH HOH . C 3 HOH A 103 403 45 HOH HOH . C 3 HOH A 104 404 186 HOH HOH . C 3 HOH A 105 405 78 HOH HOH . C 3 HOH A 106 406 42 HOH HOH . C 3 HOH A 107 407 57 HOH HOH . C 3 HOH A 108 408 191 HOH HOH . C 3 HOH A 109 409 210 HOH HOH . C 3 HOH A 110 410 56 HOH HOH . C 3 HOH A 111 411 38 HOH HOH . C 3 HOH A 112 412 20 HOH HOH . C 3 HOH A 113 413 90 HOH HOH . C 3 HOH A 114 414 100 HOH HOH . C 3 HOH A 115 415 62 HOH HOH . C 3 HOH A 116 416 133 HOH HOH . C 3 HOH A 117 417 48 HOH HOH . C 3 HOH A 118 418 63 HOH HOH . C 3 HOH A 119 419 26 HOH HOH . C 3 HOH A 120 420 41 HOH HOH . C 3 HOH A 121 421 200 HOH HOH . C 3 HOH A 122 422 150 HOH HOH . C 3 HOH A 123 423 75 HOH HOH . C 3 HOH A 124 424 157 HOH HOH . C 3 HOH A 125 425 96 HOH HOH . C 3 HOH A 126 426 46 HOH HOH . C 3 HOH A 127 427 180 HOH HOH . C 3 HOH A 128 428 49 HOH HOH . C 3 HOH A 129 429 60 HOH HOH . C 3 HOH A 130 430 138 HOH HOH . C 3 HOH A 131 431 151 HOH HOH . C 3 HOH A 132 432 215 HOH HOH . C 3 HOH A 133 433 160 HOH HOH . C 3 HOH A 134 434 206 HOH HOH . C 3 HOH A 135 435 16 HOH HOH . C 3 HOH A 136 436 97 HOH HOH . C 3 HOH A 137 437 143 HOH HOH . C 3 HOH A 138 438 159 HOH HOH . C 3 HOH A 139 439 131 HOH HOH . C 3 HOH A 140 440 112 HOH HOH . C 3 HOH A 141 441 175 HOH HOH . C 3 HOH A 142 442 176 HOH HOH . C 3 HOH A 143 443 70 HOH HOH . C 3 HOH A 144 444 53 HOH HOH . C 3 HOH A 145 445 164 HOH HOH . C 3 HOH A 146 446 144 HOH HOH . C 3 HOH A 147 447 93 HOH HOH . C 3 HOH A 148 448 137 HOH HOH . C 3 HOH A 149 449 98 HOH HOH . C 3 HOH A 150 450 161 HOH HOH . C 3 HOH A 151 451 77 HOH HOH . C 3 HOH A 152 452 117 HOH HOH . C 3 HOH A 153 453 108 HOH HOH . C 3 HOH A 154 454 173 HOH HOH . C 3 HOH A 155 455 44 HOH HOH . C 3 HOH A 156 456 209 HOH HOH . C 3 HOH A 157 457 25 HOH HOH . C 3 HOH A 158 458 113 HOH HOH . C 3 HOH A 159 459 141 HOH HOH . C 3 HOH A 160 460 135 HOH HOH . C 3 HOH A 161 461 142 HOH HOH . C 3 HOH A 162 462 82 HOH HOH . C 3 HOH A 163 463 185 HOH HOH . C 3 HOH A 164 464 198 HOH HOH . C 3 HOH A 165 465 190 HOH HOH . C 3 HOH A 166 466 172 HOH HOH . C 3 HOH A 167 467 179 HOH HOH . C 3 HOH A 168 468 214 HOH HOH . C 3 HOH A 169 469 188 HOH HOH . C 3 HOH A 170 470 204 HOH HOH . C 3 HOH A 171 471 87 HOH HOH . C 3 HOH A 172 472 139 HOH HOH . C 3 HOH A 173 473 103 HOH HOH . C 3 HOH A 174 474 127 HOH HOH . C 3 HOH A 175 475 197 HOH HOH . C 3 HOH A 176 476 68 HOH HOH . C 3 HOH A 177 477 153 HOH HOH . C 3 HOH A 178 478 136 HOH HOH . C 3 HOH A 179 479 217 HOH HOH . C 3 HOH A 180 480 212 HOH HOH . C 3 HOH A 181 481 99 HOH HOH . C 3 HOH A 182 482 115 HOH HOH . C 3 HOH A 183 483 218 HOH HOH . C 3 HOH A 184 484 154 HOH HOH . C 3 HOH A 185 485 184 HOH HOH . C 3 HOH A 186 486 207 HOH HOH . C 3 HOH A 187 487 22 HOH HOH . C 3 HOH A 188 488 147 HOH HOH . C 3 HOH A 189 489 89 HOH HOH . C 3 HOH A 190 490 146 HOH HOH . C 3 HOH A 191 491 181 HOH HOH . C 3 HOH A 192 492 121 HOH HOH . C 3 HOH A 193 493 220 HOH HOH . C 3 HOH A 194 494 107 HOH HOH . C 3 HOH A 195 495 73 HOH HOH . C 3 HOH A 196 496 219 HOH HOH . C 3 HOH A 197 497 168 HOH HOH . C 3 HOH A 198 498 119 HOH HOH . C 3 HOH A 199 499 148 HOH HOH . C 3 HOH A 200 500 140 HOH HOH . C 3 HOH A 201 501 76 HOH HOH . C 3 HOH A 202 502 125 HOH HOH . C 3 HOH A 203 503 199 HOH HOH . C 3 HOH A 204 504 183 HOH HOH . C 3 HOH A 205 505 116 HOH HOH . C 3 HOH A 206 506 208 HOH HOH . C 3 HOH A 207 507 120 HOH HOH . C 3 HOH A 208 508 182 HOH HOH . C 3 HOH A 209 509 165 HOH HOH . C 3 HOH A 210 510 171 HOH HOH . C 3 HOH A 211 511 72 HOH HOH . C 3 HOH A 212 512 213 HOH HOH . C 3 HOH A 213 513 155 HOH HOH . C 3 HOH A 214 514 109 HOH HOH . C 3 HOH A 215 515 130 HOH HOH . C 3 HOH A 216 516 123 HOH HOH . C 3 HOH A 217 517 178 HOH HOH . C 3 HOH A 218 518 162 HOH HOH . C 3 HOH A 219 519 132 HOH HOH . C 3 HOH A 220 520 170 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1H9W . . . B 2 0.895 -13.137 10.133 0.56 33.32 ? N1 A1H9W 201 A 1 HETATM 2 C C4 A1H9W . . . B 2 0.362 -11.47 11.891 0.56 30.62 ? C4 A1H9W 201 A 1 HETATM 3 C C5 A1H9W . . . B 2 1.059 -10.136 11.928 0.56 27.16 ? C5 A1H9W 201 A 1 HETATM 4 C C6 A1H9W . . . B 2 3.105 -11.157 12.531 0.56 27.79 ? C6 A1H9W 201 A 1 HETATM 5 C C7 A1H9W . . . B 2 2.725 -11.931 11.297 0.56 27.24 ? C7 A1H9W 201 A 1 HETATM 6 C C1 A1H9W . . . B 2 -0.424 -13.768 10.18 0.56 34.93 ? C1 A1H9W 201 A 1 HETATM 7 C C2 A1H9W . . . B 2 1.335 -12.569 11.436 0.56 28.53 ? C2 A1H9W 201 A 1 HETATM 8 C C3 A1H9W . . . B 2 1.381 -13.726 12.439 0.56 30.61 ? C3 A1H9W 201 A 1 HETATM 9 O O1 A1H9W . . . B 2 0.837 -13.353 13.702 0.56 35.17 ? O1 A1H9W 201 A 1 HETATM 10 O O2 A1H9W . . . B 2 2.137 -10.166 12.855 0.56 28.55 ? O2 A1H9W 201 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 10 #