data_9F53 # _model_server_result.job_id 5wxThayildOTE9S8_EMMAQ _model_server_result.datetime_utc '2025-04-25 12:47:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f53 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9F53 # _exptl.entry_id 9F53 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 139.155 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(5-methyl-1H-pyrazol-3-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.2 _cell.angle_gamma 90 _cell.entry_id 9F53 _cell.length_a 38.1 _cell.length_b 43.968 _cell.length_c 55.948 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F53 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H9 N3 O' _chem_comp.formula_weight 139.155 _chem_comp.id K3A _chem_comp.mon_nstd_flag . _chem_comp.name N-(5-methyl-1H-pyrazol-3-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C4 K3A sing 173 n n C4 C3 K3A doub 174 n y C4 N1 K3A sing 175 n y C3 C2 K3A sing 176 n y N1 N2 K3A sing 177 n y C2 N2 K3A doub 178 n y C2 N K3A sing 179 n n O C1 K3A doub 180 n n N C1 K3A sing 181 n n C1 C K3A sing 182 n n N1 H1 K3A sing 183 n n C5 H2 K3A sing 184 n n C5 H3 K3A sing 185 n n C5 H4 K3A sing 186 n n N H5 K3A sing 187 n n C H6 K3A sing 188 n n C H7 K3A sing 189 n n C H8 K3A sing 190 n n C3 H9 K3A sing 191 n n # _atom_sites.entry_id 9F53 _atom_sites.fract_transf_matrix[1][1] 0.026247 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001927 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K3A A 1 201 1 K3A LIG . C 3 HOH A 1 301 197 HOH HOH . C 3 HOH A 2 302 159 HOH HOH . C 3 HOH A 3 303 141 HOH HOH . C 3 HOH A 4 304 171 HOH HOH . C 3 HOH A 5 305 121 HOH HOH . C 3 HOH A 6 306 42 HOH HOH . C 3 HOH A 7 307 132 HOH HOH . C 3 HOH A 8 308 160 HOH HOH . C 3 HOH A 9 309 75 HOH HOH . C 3 HOH A 10 310 3 HOH HOH . C 3 HOH A 11 311 164 HOH HOH . C 3 HOH A 12 312 206 HOH HOH . C 3 HOH A 13 313 182 HOH HOH . C 3 HOH A 14 314 37 HOH HOH . C 3 HOH A 15 315 17 HOH HOH . C 3 HOH A 16 316 92 HOH HOH . C 3 HOH A 17 317 81 HOH HOH . C 3 HOH A 18 318 43 HOH HOH . C 3 HOH A 19 319 14 HOH HOH . C 3 HOH A 20 320 114 HOH HOH . C 3 HOH A 21 321 53 HOH HOH . C 3 HOH A 22 322 4 HOH HOH . C 3 HOH A 23 323 163 HOH HOH . C 3 HOH A 24 324 108 HOH HOH . C 3 HOH A 25 325 16 HOH HOH . C 3 HOH A 26 326 90 HOH HOH . C 3 HOH A 27 327 11 HOH HOH . C 3 HOH A 28 328 26 HOH HOH . C 3 HOH A 29 329 64 HOH HOH . C 3 HOH A 30 330 227 HOH HOH . C 3 HOH A 31 331 74 HOH HOH . C 3 HOH A 32 332 41 HOH HOH . C 3 HOH A 33 333 49 HOH HOH . C 3 HOH A 34 334 209 HOH HOH . C 3 HOH A 35 335 137 HOH HOH . C 3 HOH A 36 336 97 HOH HOH . C 3 HOH A 37 337 54 HOH HOH . C 3 HOH A 38 338 98 HOH HOH . C 3 HOH A 39 339 130 HOH HOH . C 3 HOH A 40 340 66 HOH HOH . C 3 HOH A 41 341 110 HOH HOH . C 3 HOH A 42 342 5 HOH HOH . C 3 HOH A 43 343 161 HOH HOH . C 3 HOH A 44 344 52 HOH HOH . C 3 HOH A 45 345 60 HOH HOH . C 3 HOH A 46 346 6 HOH HOH . C 3 HOH A 47 347 1 HOH HOH . C 3 HOH A 48 348 220 HOH HOH . C 3 HOH A 49 349 84 HOH HOH . C 3 HOH A 50 350 59 HOH HOH . C 3 HOH A 51 351 2 HOH HOH . C 3 HOH A 52 352 87 HOH HOH . C 3 HOH A 53 353 186 HOH HOH . C 3 HOH A 54 354 34 HOH HOH . C 3 HOH A 55 355 56 HOH HOH . C 3 HOH A 56 356 38 HOH HOH . C 3 HOH A 57 357 111 HOH HOH . C 3 HOH A 58 358 8 HOH HOH . C 3 HOH A 59 359 139 HOH HOH . C 3 HOH A 60 360 162 HOH HOH . C 3 HOH A 61 361 166 HOH HOH . C 3 HOH A 62 362 40 HOH HOH . C 3 HOH A 63 363 148 HOH HOH . C 3 HOH A 64 364 109 HOH HOH . C 3 HOH A 65 365 189 HOH HOH . C 3 HOH A 66 366 76 HOH HOH . C 3 HOH A 67 367 7 HOH HOH . C 3 HOH A 68 368 138 HOH HOH . C 3 HOH A 69 369 190 HOH HOH . C 3 HOH A 70 370 221 HOH HOH . C 3 HOH A 71 371 21 HOH HOH . C 3 HOH A 72 372 230 HOH HOH . C 3 HOH A 73 373 100 HOH HOH . C 3 HOH A 74 374 13 HOH HOH . C 3 HOH A 75 375 229 HOH HOH . C 3 HOH A 76 376 12 HOH HOH . C 3 HOH A 77 377 102 HOH HOH . C 3 HOH A 78 378 9 HOH HOH . C 3 HOH A 79 379 89 HOH HOH . C 3 HOH A 80 380 28 HOH HOH . C 3 HOH A 81 381 31 HOH HOH . C 3 HOH A 82 382 10 HOH HOH . C 3 HOH A 83 383 149 HOH HOH . C 3 HOH A 84 384 39 HOH HOH . C 3 HOH A 85 385 143 HOH HOH . C 3 HOH A 86 386 127 HOH HOH . C 3 HOH A 87 387 173 HOH HOH . C 3 HOH A 88 388 20 HOH HOH . C 3 HOH A 89 389 119 HOH HOH . C 3 HOH A 90 390 22 HOH HOH . C 3 HOH A 91 391 15 HOH HOH . C 3 HOH A 92 392 24 HOH HOH . C 3 HOH A 93 393 25 HOH HOH . C 3 HOH A 94 394 154 HOH HOH . C 3 HOH A 95 395 77 HOH HOH . C 3 HOH A 96 396 236 HOH HOH . C 3 HOH A 97 397 218 HOH HOH . C 3 HOH A 98 398 106 HOH HOH . C 3 HOH A 99 399 62 HOH HOH . C 3 HOH A 100 400 29 HOH HOH . C 3 HOH A 101 401 61 HOH HOH . C 3 HOH A 102 402 33 HOH HOH . C 3 HOH A 103 403 19 HOH HOH . C 3 HOH A 104 404 225 HOH HOH . C 3 HOH A 105 405 23 HOH HOH . C 3 HOH A 106 406 96 HOH HOH . C 3 HOH A 107 407 145 HOH HOH . C 3 HOH A 108 408 48 HOH HOH . C 3 HOH A 109 409 18 HOH HOH . C 3 HOH A 110 410 198 HOH HOH . C 3 HOH A 111 411 27 HOH HOH . C 3 HOH A 112 412 69 HOH HOH . C 3 HOH A 113 413 80 HOH HOH . C 3 HOH A 114 414 78 HOH HOH . C 3 HOH A 115 415 228 HOH HOH . C 3 HOH A 116 416 72 HOH HOH . C 3 HOH A 117 417 195 HOH HOH . C 3 HOH A 118 418 36 HOH HOH . C 3 HOH A 119 419 30 HOH HOH . C 3 HOH A 120 420 99 HOH HOH . C 3 HOH A 121 421 93 HOH HOH . C 3 HOH A 122 422 180 HOH HOH . C 3 HOH A 123 423 125 HOH HOH . C 3 HOH A 124 424 85 HOH HOH . C 3 HOH A 125 425 82 HOH HOH . C 3 HOH A 126 426 194 HOH HOH . C 3 HOH A 127 427 58 HOH HOH . C 3 HOH A 128 428 155 HOH HOH . C 3 HOH A 129 429 51 HOH HOH . C 3 HOH A 130 430 201 HOH HOH . C 3 HOH A 131 431 115 HOH HOH . C 3 HOH A 132 432 226 HOH HOH . C 3 HOH A 133 433 63 HOH HOH . C 3 HOH A 134 434 46 HOH HOH . C 3 HOH A 135 435 67 HOH HOH . C 3 HOH A 136 436 118 HOH HOH . C 3 HOH A 137 437 170 HOH HOH . C 3 HOH A 138 438 165 HOH HOH . C 3 HOH A 139 439 88 HOH HOH . C 3 HOH A 140 440 57 HOH HOH . C 3 HOH A 141 441 50 HOH HOH . C 3 HOH A 142 442 147 HOH HOH . C 3 HOH A 143 443 140 HOH HOH . C 3 HOH A 144 444 126 HOH HOH . C 3 HOH A 145 445 187 HOH HOH . C 3 HOH A 146 446 193 HOH HOH . C 3 HOH A 147 447 135 HOH HOH . C 3 HOH A 148 448 55 HOH HOH . C 3 HOH A 149 449 107 HOH HOH . C 3 HOH A 150 450 150 HOH HOH . C 3 HOH A 151 451 120 HOH HOH . C 3 HOH A 152 452 152 HOH HOH . C 3 HOH A 153 453 105 HOH HOH . C 3 HOH A 154 454 73 HOH HOH . C 3 HOH A 155 455 95 HOH HOH . C 3 HOH A 156 456 32 HOH HOH . C 3 HOH A 157 457 144 HOH HOH . C 3 HOH A 158 458 101 HOH HOH . C 3 HOH A 159 459 123 HOH HOH . C 3 HOH A 160 460 83 HOH HOH . C 3 HOH A 161 461 142 HOH HOH . C 3 HOH A 162 462 103 HOH HOH . C 3 HOH A 163 463 208 HOH HOH . C 3 HOH A 164 464 117 HOH HOH . C 3 HOH A 165 465 237 HOH HOH . C 3 HOH A 166 466 178 HOH HOH . C 3 HOH A 167 467 35 HOH HOH . C 3 HOH A 168 468 224 HOH HOH . C 3 HOH A 169 469 47 HOH HOH . C 3 HOH A 170 470 176 HOH HOH . C 3 HOH A 171 471 68 HOH HOH . C 3 HOH A 172 472 205 HOH HOH . C 3 HOH A 173 473 199 HOH HOH . C 3 HOH A 174 474 157 HOH HOH . C 3 HOH A 175 475 113 HOH HOH . C 3 HOH A 176 476 196 HOH HOH . C 3 HOH A 177 477 172 HOH HOH . C 3 HOH A 178 478 204 HOH HOH . C 3 HOH A 179 479 45 HOH HOH . C 3 HOH A 180 480 231 HOH HOH . C 3 HOH A 181 481 124 HOH HOH . C 3 HOH A 182 482 207 HOH HOH . C 3 HOH A 183 483 128 HOH HOH . C 3 HOH A 184 484 212 HOH HOH . C 3 HOH A 185 485 168 HOH HOH . C 3 HOH A 186 486 151 HOH HOH . C 3 HOH A 187 487 65 HOH HOH . C 3 HOH A 188 488 185 HOH HOH . C 3 HOH A 189 489 79 HOH HOH . C 3 HOH A 190 490 215 HOH HOH . C 3 HOH A 191 491 213 HOH HOH . C 3 HOH A 192 492 94 HOH HOH . C 3 HOH A 193 493 91 HOH HOH . C 3 HOH A 194 494 158 HOH HOH . C 3 HOH A 195 495 177 HOH HOH . C 3 HOH A 196 496 169 HOH HOH . C 3 HOH A 197 497 122 HOH HOH . C 3 HOH A 198 498 70 HOH HOH . C 3 HOH A 199 499 133 HOH HOH . C 3 HOH A 200 500 44 HOH HOH . C 3 HOH A 201 501 203 HOH HOH . C 3 HOH A 202 502 216 HOH HOH . C 3 HOH A 203 503 183 HOH HOH . C 3 HOH A 204 504 134 HOH HOH . C 3 HOH A 205 505 131 HOH HOH . C 3 HOH A 206 506 214 HOH HOH . C 3 HOH A 207 507 116 HOH HOH . C 3 HOH A 208 508 234 HOH HOH . C 3 HOH A 209 509 235 HOH HOH . C 3 HOH A 210 510 232 HOH HOH . C 3 HOH A 211 511 136 HOH HOH . C 3 HOH A 212 512 211 HOH HOH . C 3 HOH A 213 513 191 HOH HOH . C 3 HOH A 214 514 200 HOH HOH . C 3 HOH A 215 515 239 HOH HOH . C 3 HOH A 216 516 153 HOH HOH . C 3 HOH A 217 517 86 HOH HOH . C 3 HOH A 218 518 71 HOH HOH . C 3 HOH A 219 519 129 HOH HOH . C 3 HOH A 220 520 175 HOH HOH . C 3 HOH A 221 521 233 HOH HOH . C 3 HOH A 222 522 217 HOH HOH . C 3 HOH A 223 523 156 HOH HOH . C 3 HOH A 224 524 146 HOH HOH . C 3 HOH A 225 525 223 HOH HOH . C 3 HOH A 226 526 210 HOH HOH . C 3 HOH A 227 527 202 HOH HOH . C 3 HOH A 228 528 188 HOH HOH . C 3 HOH A 229 529 174 HOH HOH . C 3 HOH A 230 530 192 HOH HOH . C 3 HOH A 231 531 219 HOH HOH . C 3 HOH A 232 532 167 HOH HOH . C 3 HOH A 233 533 184 HOH HOH . C 3 HOH A 234 534 104 HOH HOH . C 3 HOH A 235 535 112 HOH HOH . C 3 HOH A 236 536 222 HOH HOH . C 3 HOH A 237 537 238 HOH HOH . C 3 HOH A 238 538 181 HOH HOH . C 3 HOH A 239 539 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 K3A . . . B 2 -8.42 -8.423 9.192 0.74 14.66 ? N1 K3A 201 A 1 HETATM 2 C C4 K3A . . . B 2 -9.02 -7.457 9.884 0.74 13.85 ? C4 K3A 201 A 1 HETATM 3 C C5 K3A . . . B 2 -8.872 -6.02 9.501 0.74 13.91 ? C5 K3A 201 A 1 HETATM 4 N N K3A . . . B 2 -10.057 -10.394 11.659 0.74 16.45 ? N K3A 201 A 1 HETATM 5 C C K3A . . . B 2 -11.141 -11.543 13.474 0.74 14.1 ? C K3A 201 A 1 HETATM 6 O O K3A . . . B 2 -11.037 -9.165 13.289 0.74 13.46 ? O K3A 201 A 1 HETATM 7 C C1 K3A . . . B 2 -10.756 -10.249 12.817 0.74 18.84 ? C1 K3A 201 A 1 HETATM 8 C C2 K3A . . . B 2 -9.556 -9.377 10.855 0.74 17 ? C2 K3A 201 A 1 HETATM 9 C C3 K3A . . . B 2 -9.754 -8.021 10.938 0.74 13.12 ? C3 K3A 201 A 1 HETATM 10 N N2 K3A . . . B 2 -8.752 -9.59 9.801 0.74 17.41 ? N2 K3A 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #