data_9F54 # _model_server_result.job_id '_cteZ8n9YfLw8AAUjGiQ-A' _model_server_result.datetime_utc '2024-11-16 14:39:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f54 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9F54 # _exptl.entry_id 9F54 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 208.26 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-methyl-3-[(3R)-piperidin-3-yl]-1H-pyrazole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.19 _cell.angle_gamma 90 _cell.entry_id 9F54 _cell.length_a 38.065 _cell.length_b 43.889 _cell.length_c 56.104 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F54 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N4 O' _chem_comp.formula_weight 208.26 _chem_comp.id K3Y _chem_comp.mon_nstd_flag . _chem_comp.name 1-methyl-3-[(3R)-piperidin-3-yl]-1H-pyrazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C3 K3Y doub 173 n n C3 N1 K3Y sing 174 n n C3 C2 K3Y sing 175 n n C2 C1 K3Y doub 176 n y C2 C4 K3Y sing 177 n y C1 N K3Y sing 178 n y C6 C7 K3Y sing 179 n n C6 C5 K3Y sing 180 n n C4 C5 K3Y sing 181 n n C4 N2 K3Y doub 182 n y C9 C5 K3Y sing 183 n n C9 N3 K3Y sing 184 n n C8 C7 K3Y sing 185 n n C8 N3 K3Y sing 186 n n N C K3Y sing 187 n n N N2 K3Y sing 188 n y N1 H1 K3Y sing 189 n n N1 H2 K3Y sing 190 n n N3 H3 K3Y sing 191 n n C5 H5 K3Y sing 192 n n C6 H6 K3Y sing 193 n n C6 H7 K3Y sing 194 n n C7 H8 K3Y sing 195 n n C7 H9 K3Y sing 196 n n C8 H10 K3Y sing 197 n n C8 H11 K3Y sing 198 n n C H12 K3Y sing 199 n n C H13 K3Y sing 200 n n C H14 K3Y sing 201 n n C1 H15 K3Y sing 202 n n C9 H16 K3Y sing 203 n n C9 H17 K3Y sing 204 n n # _atom_sites.entry_id 9F54 _atom_sites.fract_transf_matrix[1][1] 0.026271 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001925 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K3Y A 1 201 1 K3Y LIG . C 3 HOH A 1 301 172 HOH HOH . C 3 HOH A 2 302 175 HOH HOH . C 3 HOH A 3 303 159 HOH HOH . C 3 HOH A 4 304 185 HOH HOH . C 3 HOH A 5 305 68 HOH HOH . C 3 HOH A 6 306 56 HOH HOH . C 3 HOH A 7 307 101 HOH HOH . C 3 HOH A 8 308 49 HOH HOH . C 3 HOH A 9 309 14 HOH HOH . C 3 HOH A 10 310 64 HOH HOH . C 3 HOH A 11 311 126 HOH HOH . C 3 HOH A 12 312 178 HOH HOH . C 3 HOH A 13 313 129 HOH HOH . C 3 HOH A 14 314 77 HOH HOH . C 3 HOH A 15 315 85 HOH HOH . C 3 HOH A 16 316 147 HOH HOH . C 3 HOH A 17 317 33 HOH HOH . C 3 HOH A 18 318 93 HOH HOH . C 3 HOH A 19 319 104 HOH HOH . C 3 HOH A 20 320 4 HOH HOH . C 3 HOH A 21 321 17 HOH HOH . C 3 HOH A 22 322 134 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 107 HOH HOH . C 3 HOH A 25 325 75 HOH HOH . C 3 HOH A 26 326 114 HOH HOH . C 3 HOH A 27 327 1 HOH HOH . C 3 HOH A 28 328 15 HOH HOH . C 3 HOH A 29 329 53 HOH HOH . C 3 HOH A 30 330 37 HOH HOH . C 3 HOH A 31 331 8 HOH HOH . C 3 HOH A 32 332 145 HOH HOH . C 3 HOH A 33 333 69 HOH HOH . C 3 HOH A 34 334 10 HOH HOH . C 3 HOH A 35 335 6 HOH HOH . C 3 HOH A 36 336 184 HOH HOH . C 3 HOH A 37 337 21 HOH HOH . C 3 HOH A 38 338 177 HOH HOH . C 3 HOH A 39 339 133 HOH HOH . C 3 HOH A 40 340 5 HOH HOH . C 3 HOH A 41 341 59 HOH HOH . C 3 HOH A 42 342 152 HOH HOH . C 3 HOH A 43 343 7 HOH HOH . C 3 HOH A 44 344 51 HOH HOH . C 3 HOH A 45 345 166 HOH HOH . C 3 HOH A 46 346 3 HOH HOH . C 3 HOH A 47 347 73 HOH HOH . C 3 HOH A 48 348 61 HOH HOH . C 3 HOH A 49 349 48 HOH HOH . C 3 HOH A 50 350 165 HOH HOH . C 3 HOH A 51 351 31 HOH HOH . C 3 HOH A 52 352 186 HOH HOH . C 3 HOH A 53 353 106 HOH HOH . C 3 HOH A 54 354 135 HOH HOH . C 3 HOH A 55 355 164 HOH HOH . C 3 HOH A 56 356 45 HOH HOH . C 3 HOH A 57 357 66 HOH HOH . C 3 HOH A 58 358 170 HOH HOH . C 3 HOH A 59 359 123 HOH HOH . C 3 HOH A 60 360 27 HOH HOH . C 3 HOH A 61 361 139 HOH HOH . C 3 HOH A 62 362 36 HOH HOH . C 3 HOH A 63 363 2 HOH HOH . C 3 HOH A 64 364 44 HOH HOH . C 3 HOH A 65 365 30 HOH HOH . C 3 HOH A 66 366 16 HOH HOH . C 3 HOH A 67 367 156 HOH HOH . C 3 HOH A 68 368 47 HOH HOH . C 3 HOH A 69 369 58 HOH HOH . C 3 HOH A 70 370 62 HOH HOH . C 3 HOH A 71 371 12 HOH HOH . C 3 HOH A 72 372 113 HOH HOH . C 3 HOH A 73 373 19 HOH HOH . C 3 HOH A 74 374 18 HOH HOH . C 3 HOH A 75 375 110 HOH HOH . C 3 HOH A 76 376 13 HOH HOH . C 3 HOH A 77 377 57 HOH HOH . C 3 HOH A 78 378 20 HOH HOH . C 3 HOH A 79 379 25 HOH HOH . C 3 HOH A 80 380 24 HOH HOH . C 3 HOH A 81 381 52 HOH HOH . C 3 HOH A 82 382 115 HOH HOH . C 3 HOH A 83 383 83 HOH HOH . C 3 HOH A 84 384 54 HOH HOH . C 3 HOH A 85 385 26 HOH HOH . C 3 HOH A 86 386 29 HOH HOH . C 3 HOH A 87 387 116 HOH HOH . C 3 HOH A 88 388 160 HOH HOH . C 3 HOH A 89 389 60 HOH HOH . C 3 HOH A 90 390 153 HOH HOH . C 3 HOH A 91 391 118 HOH HOH . C 3 HOH A 92 392 76 HOH HOH . C 3 HOH A 93 393 28 HOH HOH . C 3 HOH A 94 394 65 HOH HOH . C 3 HOH A 95 395 157 HOH HOH . C 3 HOH A 96 396 103 HOH HOH . C 3 HOH A 97 397 86 HOH HOH . C 3 HOH A 98 398 131 HOH HOH . C 3 HOH A 99 399 22 HOH HOH . C 3 HOH A 100 400 46 HOH HOH . C 3 HOH A 101 401 34 HOH HOH . C 3 HOH A 102 402 50 HOH HOH . C 3 HOH A 103 403 92 HOH HOH . C 3 HOH A 104 404 90 HOH HOH . C 3 HOH A 105 405 95 HOH HOH . C 3 HOH A 106 406 41 HOH HOH . C 3 HOH A 107 407 80 HOH HOH . C 3 HOH A 108 408 38 HOH HOH . C 3 HOH A 109 409 40 HOH HOH . C 3 HOH A 110 410 79 HOH HOH . C 3 HOH A 111 411 88 HOH HOH . C 3 HOH A 112 412 111 HOH HOH . C 3 HOH A 113 413 55 HOH HOH . C 3 HOH A 114 414 158 HOH HOH . C 3 HOH A 115 415 102 HOH HOH . C 3 HOH A 116 416 97 HOH HOH . C 3 HOH A 117 417 161 HOH HOH . C 3 HOH A 118 418 146 HOH HOH . C 3 HOH A 119 419 39 HOH HOH . C 3 HOH A 120 420 124 HOH HOH . C 3 HOH A 121 421 141 HOH HOH . C 3 HOH A 122 422 89 HOH HOH . C 3 HOH A 123 423 98 HOH HOH . C 3 HOH A 124 424 42 HOH HOH . C 3 HOH A 125 425 130 HOH HOH . C 3 HOH A 126 426 43 HOH HOH . C 3 HOH A 127 427 70 HOH HOH . C 3 HOH A 128 428 128 HOH HOH . C 3 HOH A 129 429 32 HOH HOH . C 3 HOH A 130 430 99 HOH HOH . C 3 HOH A 131 431 100 HOH HOH . C 3 HOH A 132 432 71 HOH HOH . C 3 HOH A 133 433 11 HOH HOH . C 3 HOH A 134 434 132 HOH HOH . C 3 HOH A 135 435 137 HOH HOH . C 3 HOH A 136 436 143 HOH HOH . C 3 HOH A 137 437 142 HOH HOH . C 3 HOH A 138 438 188 HOH HOH . C 3 HOH A 139 439 183 HOH HOH . C 3 HOH A 140 440 151 HOH HOH . C 3 HOH A 141 441 122 HOH HOH . C 3 HOH A 142 442 72 HOH HOH . C 3 HOH A 143 443 150 HOH HOH . C 3 HOH A 144 444 82 HOH HOH . C 3 HOH A 145 445 173 HOH HOH . C 3 HOH A 146 446 63 HOH HOH . C 3 HOH A 147 447 182 HOH HOH . C 3 HOH A 148 448 136 HOH HOH . C 3 HOH A 149 449 9 HOH HOH . C 3 HOH A 150 450 174 HOH HOH . C 3 HOH A 151 451 176 HOH HOH . C 3 HOH A 152 452 121 HOH HOH . C 3 HOH A 153 453 189 HOH HOH . C 3 HOH A 154 454 180 HOH HOH . C 3 HOH A 155 455 162 HOH HOH . C 3 HOH A 156 456 168 HOH HOH . C 3 HOH A 157 457 67 HOH HOH . C 3 HOH A 158 458 96 HOH HOH . C 3 HOH A 159 459 78 HOH HOH . C 3 HOH A 160 460 108 HOH HOH . C 3 HOH A 161 461 171 HOH HOH . C 3 HOH A 162 462 163 HOH HOH . C 3 HOH A 163 463 167 HOH HOH . C 3 HOH A 164 464 91 HOH HOH . C 3 HOH A 165 465 81 HOH HOH . C 3 HOH A 166 466 74 HOH HOH . C 3 HOH A 167 467 127 HOH HOH . C 3 HOH A 168 468 35 HOH HOH . C 3 HOH A 169 469 84 HOH HOH . C 3 HOH A 170 470 109 HOH HOH . C 3 HOH A 171 471 193 HOH HOH . C 3 HOH A 172 472 179 HOH HOH . C 3 HOH A 173 473 149 HOH HOH . C 3 HOH A 174 474 87 HOH HOH . C 3 HOH A 175 475 148 HOH HOH . C 3 HOH A 176 476 112 HOH HOH . C 3 HOH A 177 477 154 HOH HOH . C 3 HOH A 178 478 125 HOH HOH . C 3 HOH A 179 479 181 HOH HOH . C 3 HOH A 180 480 155 HOH HOH . C 3 HOH A 181 481 119 HOH HOH . C 3 HOH A 182 482 187 HOH HOH . C 3 HOH A 183 483 191 HOH HOH . C 3 HOH A 184 484 120 HOH HOH . C 3 HOH A 185 485 94 HOH HOH . C 3 HOH A 186 486 144 HOH HOH . C 3 HOH A 187 487 105 HOH HOH . C 3 HOH A 188 488 117 HOH HOH . C 3 HOH A 189 489 138 HOH HOH . C 3 HOH A 190 490 140 HOH HOH . C 3 HOH A 191 491 169 HOH HOH . C 3 HOH A 192 492 192 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 K3Y . . . B 2 4.808 -7.916 41.157 0.58 42.47 ? N1 K3Y 201 A 1 HETATM 2 N N3 K3Y . . . B 2 8.768 -9.422 37.214 0.58 22.16 ? N3 K3Y 201 A 1 HETATM 3 C C4 K3Y . . . B 2 5.924 -9.383 38.498 0.58 31.64 ? C4 K3Y 201 A 1 HETATM 4 C C5 K3Y . . . B 2 7.259 -9.085 39.098 0.58 31.28 ? C5 K3Y 201 A 1 HETATM 5 C C6 K3Y . . . B 2 7.656 -7.641 38.943 0.58 26.04 ? C6 K3Y 201 A 1 HETATM 6 C C7 K3Y . . . B 2 9.158 -7.507 38.725 0.58 22.81 ? C7 K3Y 201 A 1 HETATM 7 C C8 K3Y . . . B 2 9.573 -8.219 37.454 0.58 29.16 ? C8 K3Y 201 A 1 HETATM 8 N N K3Y . . . B 2 4.43 -9.895 37.016 0.58 30.18 ? N K3Y 201 A 1 HETATM 9 C C K3Y . . . B 2 3.896 -10.235 35.71 0.58 25.66 ? C K3Y 201 A 1 HETATM 10 O O K3Y . . . B 2 3.89 -10.056 41.207 0.58 44.14 ? O K3Y 201 A 1 HETATM 11 C C1 K3Y . . . B 2 3.777 -9.761 38.176 0.58 38.47 ? C1 K3Y 201 A 1 HETATM 12 C C2 K3Y . . . B 2 4.722 -9.443 39.13 0.58 32.4 ? C2 K3Y 201 A 1 HETATM 13 C C3 K3Y . . . B 2 4.442 -9.205 40.536 0.58 37.15 ? C3 K3Y 201 A 1 HETATM 14 C C9 K3Y . . . B 2 8.325 -9.984 38.491 0.58 32.24 ? C9 K3Y 201 A 1 HETATM 15 N N2 K3Y . . . B 2 5.758 -9.664 37.193 0.58 33.29 ? N2 K3Y 201 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 383 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 15 #