data_9F5J # _model_server_result.job_id lLUsUqygzqf-4b86epfkRg _model_server_result.datetime_utc '2024-11-27 08:11:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f5j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 9F5J # _exptl.entry_id 9F5J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9F5J _cell.length_a 47.78 _cell.length_b 49.715 _cell.length_c 114.248 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F5J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 17 A HIS 59 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc2 A OG SER 37 A SER 79 1_555 D CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc3 A OD2 ASP 40 A ASP 82 1_555 D CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc4 A OD1 ASP 56 A ASP 98 1_555 D CD CD . A CD 202 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc5 A OD2 ASP 56 A ASP 98 1_555 D CD CD . A CD 202 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc6 A OD1 ASP 61 A ASP 103 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc7 A OD2 ASP 61 A ASP 103 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc8 A OG SER 63 A SER 105 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc9 A NE2 HIS 103 A HIS 145 1_555 D CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc10 A OE1 GLU 132 A GLU 174 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc11 A OE2 GLU 132 A GLU 174 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc12 C CD CD . A CD 201 1_555 G O HOH . A HOH 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc13 B NE2 HIS 17 B HIS 59 1_555 E CD CD . B CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9F5J _atom_sites.fract_transf_matrix[1][1] 0.020929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020115 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008753 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 201 2 CD CD . D 2 CD A 1 202 4 CD CD . E 2 CD B 1 201 3 CD CD . F 2 CD B 1 202 5 CD CD . G 3 HOH A 1 301 100 HOH HOH . G 3 HOH A 2 302 119 HOH HOH . G 3 HOH A 3 303 86 HOH HOH . G 3 HOH A 4 304 16 HOH HOH . G 3 HOH A 5 305 79 HOH HOH . G 3 HOH A 6 306 32 HOH HOH . G 3 HOH A 7 307 31 HOH HOH . G 3 HOH A 8 308 62 HOH HOH . G 3 HOH A 9 309 47 HOH HOH . G 3 HOH A 10 310 42 HOH HOH . G 3 HOH A 11 311 87 HOH HOH . G 3 HOH A 12 312 68 HOH HOH . G 3 HOH A 13 313 43 HOH HOH . G 3 HOH A 14 314 5 HOH HOH . G 3 HOH A 15 315 53 HOH HOH . G 3 HOH A 16 316 89 HOH HOH . G 3 HOH A 17 317 19 HOH HOH . G 3 HOH A 18 318 97 HOH HOH . G 3 HOH A 19 319 25 HOH HOH . G 3 HOH A 20 320 91 HOH HOH . G 3 HOH A 21 321 28 HOH HOH . G 3 HOH A 22 322 120 HOH HOH . G 3 HOH A 23 323 14 HOH HOH . G 3 HOH A 24 324 110 HOH HOH . G 3 HOH A 25 325 102 HOH HOH . G 3 HOH A 26 326 52 HOH HOH . G 3 HOH A 27 327 70 HOH HOH . G 3 HOH A 28 328 29 HOH HOH . G 3 HOH A 29 329 115 HOH HOH . G 3 HOH A 30 330 26 HOH HOH . G 3 HOH A 31 331 116 HOH HOH . G 3 HOH A 32 332 46 HOH HOH . G 3 HOH A 33 333 96 HOH HOH . G 3 HOH A 34 334 103 HOH HOH . G 3 HOH A 35 335 67 HOH HOH . G 3 HOH A 36 336 2 HOH HOH . G 3 HOH A 37 337 92 HOH HOH . G 3 HOH A 38 338 56 HOH HOH . G 3 HOH A 39 339 58 HOH HOH . G 3 HOH A 40 340 123 HOH HOH . G 3 HOH A 41 341 40 HOH HOH . G 3 HOH A 42 342 17 HOH HOH . G 3 HOH A 43 343 57 HOH HOH . G 3 HOH A 44 344 73 HOH HOH . G 3 HOH A 45 345 1 HOH HOH . G 3 HOH A 46 346 24 HOH HOH . G 3 HOH A 47 347 61 HOH HOH . G 3 HOH A 48 348 21 HOH HOH . G 3 HOH A 49 349 33 HOH HOH . G 3 HOH A 50 350 71 HOH HOH . G 3 HOH A 51 351 104 HOH HOH . G 3 HOH A 52 352 30 HOH HOH . G 3 HOH A 53 353 95 HOH HOH . G 3 HOH A 54 354 136 HOH HOH . G 3 HOH A 55 355 13 HOH HOH . G 3 HOH A 56 356 6 HOH HOH . G 3 HOH A 57 357 44 HOH HOH . G 3 HOH A 58 358 74 HOH HOH . G 3 HOH A 59 359 15 HOH HOH . G 3 HOH A 60 360 27 HOH HOH . G 3 HOH A 61 361 108 HOH HOH . G 3 HOH A 62 362 82 HOH HOH . G 3 HOH A 63 363 72 HOH HOH . G 3 HOH A 64 364 7 HOH HOH . G 3 HOH A 65 365 55 HOH HOH . G 3 HOH A 66 366 76 HOH HOH . G 3 HOH A 67 367 20 HOH HOH . G 3 HOH A 68 368 85 HOH HOH . G 3 HOH A 69 369 65 HOH HOH . G 3 HOH A 70 370 128 HOH HOH . G 3 HOH A 71 371 83 HOH HOH . G 3 HOH A 72 372 126 HOH HOH . G 3 HOH A 73 373 49 HOH HOH . G 3 HOH A 74 374 18 HOH HOH . G 3 HOH A 75 375 75 HOH HOH . G 3 HOH A 76 376 121 HOH HOH . G 3 HOH A 77 377 48 HOH HOH . G 3 HOH A 78 378 88 HOH HOH . G 3 HOH A 79 379 107 HOH HOH . G 3 HOH A 80 380 117 HOH HOH . G 3 HOH A 81 381 54 HOH HOH . G 3 HOH A 82 382 106 HOH HOH . G 3 HOH A 83 383 114 HOH HOH . G 3 HOH A 84 384 38 HOH HOH . G 3 HOH A 85 385 81 HOH HOH . G 3 HOH A 86 386 66 HOH HOH . G 3 HOH A 87 387 84 HOH HOH . G 3 HOH A 88 388 77 HOH HOH . G 3 HOH A 89 389 137 HOH HOH . G 3 HOH A 90 390 109 HOH HOH . G 3 HOH A 91 391 134 HOH HOH . G 3 HOH A 92 392 118 HOH HOH . G 3 HOH A 93 393 132 HOH HOH . H 3 HOH B 1 301 127 HOH HOH . H 3 HOH B 2 302 105 HOH HOH . H 3 HOH B 3 303 23 HOH HOH . H 3 HOH B 4 304 45 HOH HOH . H 3 HOH B 5 305 10 HOH HOH . H 3 HOH B 6 306 35 HOH HOH . H 3 HOH B 7 307 22 HOH HOH . H 3 HOH B 8 308 50 HOH HOH . H 3 HOH B 9 309 93 HOH HOH . H 3 HOH B 10 310 59 HOH HOH . H 3 HOH B 11 311 12 HOH HOH . H 3 HOH B 12 312 4 HOH HOH . H 3 HOH B 13 313 98 HOH HOH . H 3 HOH B 14 314 125 HOH HOH . H 3 HOH B 15 315 80 HOH HOH . H 3 HOH B 16 316 112 HOH HOH . H 3 HOH B 17 317 3 HOH HOH . H 3 HOH B 18 318 94 HOH HOH . H 3 HOH B 19 319 101 HOH HOH . H 3 HOH B 20 320 9 HOH HOH . H 3 HOH B 21 321 133 HOH HOH . H 3 HOH B 22 322 8 HOH HOH . H 3 HOH B 23 323 11 HOH HOH . H 3 HOH B 24 324 113 HOH HOH . H 3 HOH B 25 325 37 HOH HOH . H 3 HOH B 26 326 51 HOH HOH . H 3 HOH B 27 327 78 HOH HOH . H 3 HOH B 28 328 90 HOH HOH . H 3 HOH B 29 329 60 HOH HOH . H 3 HOH B 30 330 130 HOH HOH . H 3 HOH B 31 331 39 HOH HOH . H 3 HOH B 32 332 124 HOH HOH . H 3 HOH B 33 333 41 HOH HOH . H 3 HOH B 34 334 129 HOH HOH . H 3 HOH B 35 335 138 HOH HOH . H 3 HOH B 36 336 63 HOH HOH . H 3 HOH B 37 337 34 HOH HOH . H 3 HOH B 38 338 36 HOH HOH . H 3 HOH B 39 339 99 HOH HOH . H 3 HOH B 40 340 122 HOH HOH . H 3 HOH B 41 341 135 HOH HOH . H 3 HOH B 42 342 131 HOH HOH . H 3 HOH B 43 343 64 HOH HOH . H 3 HOH B 44 344 69 HOH HOH . H 3 HOH B 45 345 111 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.702 _atom_site.Cartn_y 5.044 _atom_site.Cartn_z 69.537 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 159.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 94 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #