data_9F6W # _model_server_result.job_id ZVS8GEvWfIwWXy050V9VpQ _model_server_result.datetime_utc '2025-07-13 04:20:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f6w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1901}' # _entry.id 9F6W # _exptl.entry_id 9F6W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 263.335 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-ethyl-2-methyl-5-piperazin-1-ylcarbonyl-1~{H}-pyrrol-3-yl)ethanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9F6W _cell.length_a 93.753 _cell.length_b 93.753 _cell.length_c 33.229 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F6W _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc2 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2009 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc3 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2021 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc4 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2025 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc5 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2047 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc6 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2050 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'C14 H21 N3 O2' _chem_comp.formula_weight 263.335 _chem_comp.id A1IAC _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-ethyl-2-methyl-5-piperazin-1-ylcarbonyl-1~{H}-pyrrol-3-yl)ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C09 A1IAC sing 1 n n C09 O10 A1IAC doub 2 n n C09 C08 A1IAC sing 3 n n C02 C03 A1IAC sing 4 n n C02 C01 A1IAC sing 5 n n C18 N17 A1IAC sing 6 n n C18 C19 A1IAC sing 7 n n C08 C03 A1IAC sing 8 n y C08 C06 A1IAC doub 9 n y C03 C04 A1IAC doub 10 n y N17 C16 A1IAC sing 11 n n C16 C15 A1IAC sing 12 n n C06 C07 A1IAC sing 13 n n C06 N05 A1IAC sing 14 n y C04 C12 A1IAC sing 15 n n C04 N05 A1IAC sing 16 n y C19 N14 A1IAC sing 17 n n C12 N14 A1IAC sing 18 n n C12 O13 A1IAC doub 19 n n N14 C15 A1IAC sing 20 n n C16 H1 A1IAC sing 21 n n C16 H2 A1IAC sing 22 n n C18 H3 A1IAC sing 23 n n C18 H4 A1IAC sing 24 n n C19 H5 A1IAC sing 25 n n C19 H6 A1IAC sing 26 n n C01 H7 A1IAC sing 27 n n C01 H8 A1IAC sing 28 n n C01 H9 A1IAC sing 29 n n C02 H10 A1IAC sing 30 n n C02 H11 A1IAC sing 31 n n C07 H12 A1IAC sing 32 n n C07 H13 A1IAC sing 33 n n C07 H14 A1IAC sing 34 n n C11 H15 A1IAC sing 35 n n C11 H16 A1IAC sing 36 n n C11 H17 A1IAC sing 37 n n C15 H18 A1IAC sing 38 n n C15 H19 A1IAC sing 39 n n N05 H20 A1IAC sing 40 n n N17 H21 A1IAC sing 41 n n # _atom_sites.entry_id 9F6W _atom_sites.fract_transf_matrix[1][1] 0.010666 _atom_sites.fract_transf_matrix[1][2] 0.006158 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012316 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1IAC A 1 1901 1901 A1IAC D14 . C 3 EDO A 1 1902 2001 EDO EDO . D 4 MG A 1 1903 1 MG MG . E 5 HOH A 1 2001 44 HOH HOH . E 5 HOH A 2 2002 24 HOH HOH . E 5 HOH A 3 2003 21 HOH HOH . E 5 HOH A 4 2004 49 HOH HOH . E 5 HOH A 5 2005 5 HOH HOH . E 5 HOH A 6 2006 31 HOH HOH . E 5 HOH A 7 2007 42 HOH HOH . E 5 HOH A 8 2008 4 HOH HOH . E 5 HOH A 9 2009 45 HOH HOH . E 5 HOH A 10 2010 40 HOH HOH . E 5 HOH A 11 2011 36 HOH HOH . E 5 HOH A 12 2012 58 HOH HOH . E 5 HOH A 13 2013 34 HOH HOH . E 5 HOH A 14 2014 28 HOH HOH . E 5 HOH A 15 2015 16 HOH HOH . E 5 HOH A 16 2016 19 HOH HOH . E 5 HOH A 17 2017 7 HOH HOH . E 5 HOH A 18 2018 33 HOH HOH . E 5 HOH A 19 2019 32 HOH HOH . E 5 HOH A 20 2020 43 HOH HOH . E 5 HOH A 21 2021 56 HOH HOH . E 5 HOH A 22 2022 3 HOH HOH . E 5 HOH A 23 2023 11 HOH HOH . E 5 HOH A 24 2024 1 HOH HOH . E 5 HOH A 25 2025 46 HOH HOH . E 5 HOH A 26 2026 18 HOH HOH . E 5 HOH A 27 2027 39 HOH HOH . E 5 HOH A 28 2028 2 HOH HOH . E 5 HOH A 29 2029 15 HOH HOH . E 5 HOH A 30 2030 23 HOH HOH . E 5 HOH A 31 2031 10 HOH HOH . E 5 HOH A 32 2032 48 HOH HOH . E 5 HOH A 33 2033 35 HOH HOH . E 5 HOH A 34 2034 8 HOH HOH . E 5 HOH A 35 2035 14 HOH HOH . E 5 HOH A 36 2036 50 HOH HOH . E 5 HOH A 37 2037 51 HOH HOH . E 5 HOH A 38 2038 25 HOH HOH . E 5 HOH A 39 2039 22 HOH HOH . E 5 HOH A 40 2040 9 HOH HOH . E 5 HOH A 41 2041 12 HOH HOH . E 5 HOH A 42 2042 27 HOH HOH . E 5 HOH A 43 2043 26 HOH HOH . E 5 HOH A 44 2044 13 HOH HOH . E 5 HOH A 45 2045 6 HOH HOH . E 5 HOH A 46 2046 52 HOH HOH . E 5 HOH A 47 2047 57 HOH HOH . E 5 HOH A 48 2048 37 HOH HOH . E 5 HOH A 49 2049 38 HOH HOH . E 5 HOH A 50 2050 47 HOH HOH . E 5 HOH A 51 2051 29 HOH HOH . E 5 HOH A 52 2052 17 HOH HOH . E 5 HOH A 53 2053 30 HOH HOH . E 5 HOH A 54 2054 54 HOH HOH . E 5 HOH A 55 2055 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 A1IAC . . . B 2 -38.147 38.96 -19.963 1 37.65 ? C12 A1IAC 1901 A 1 HETATM 2 C C16 A1IAC . . . B 2 -41.36 36.918 -20.392 1 47.2 ? C16 A1IAC 1901 A 1 HETATM 3 C C18 A1IAC . . . B 2 -39.44 35.809 -21.314 1 47.7 ? C18 A1IAC 1901 A 1 HETATM 4 C C19 A1IAC . . . B 2 -38.561 36.39 -20.198 1 47.37 ? C19 A1IAC 1901 A 1 HETATM 5 C C01 A1IAC . . . B 2 -36.276 42.238 -21.085 1 42.33 ? C01 A1IAC 1901 A 1 HETATM 6 C C02 A1IAC . . . B 2 -36.47 40.927 -21.835 1 37.14 ? C02 A1IAC 1901 A 1 HETATM 7 C C03 A1IAC . . . B 2 -35.864 39.667 -21.13 1 35.27 ? C03 A1IAC 1901 A 1 HETATM 8 C C04 A1IAC . . . B 2 -36.627 38.82 -20.357 1 31.31 ? C04 A1IAC 1901 A 1 HETATM 9 C C06 A1IAC . . . B 2 -34.59 37.96 -20.374 1 34.86 ? C06 A1IAC 1901 A 1 HETATM 10 C C07 A1IAC . . . B 2 -33.466 36.964 -20.04 1 30.13 ? C07 A1IAC 1901 A 1 HETATM 11 C C08 A1IAC . . . B 2 -34.562 39.116 -21.163 1 33.52 ? C08 A1IAC 1901 A 1 HETATM 12 C C09 A1IAC . . . B 2 -33.303 39.605 -21.898 1 43.93 ? C09 A1IAC 1901 A 1 HETATM 13 C C11 A1IAC . . . B 2 -33.394 40.613 -23.05 1 38.24 ? C11 A1IAC 1901 A 1 HETATM 14 C C15 A1IAC . . . B 2 -40.43 37.737 -19.481 1 45.19 ? C15 A1IAC 1901 A 1 HETATM 15 N N05 A1IAC . . . B 2 -35.832 37.827 -19.906 1 31.72 ? N05 A1IAC 1901 A 1 HETATM 16 N N14 A1IAC . . . B 2 -39.005 37.738 -19.873 1 40.86 ? N14 A1IAC 1901 A 1 HETATM 17 N N17 A1IAC . . . B 2 -40.802 35.67 -20.84 1 51.61 ? N17 A1IAC 1901 A 1 HETATM 18 O O10 A1IAC . . . B 2 -32.223 39.181 -21.597 1 38.03 ? O10 A1IAC 1901 A 1 HETATM 19 O O13 A1IAC . . . B 2 -38.59 40.031 -19.685 1 44.48 ? O13 A1IAC 1901 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 19 #