data_9F7F # _model_server_result.job_id ITwMOfSbbCo7SBCYp9xxhw _model_server_result.datetime_utc '2024-11-16 13:26:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f7f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9F7F # _exptl.entry_id 9F7F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.295 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S)-1-(phenylsulfonyl)pyrrolidin-3-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.21 _cell.angle_gamma 90 _cell.entry_id 9F7F _cell.length_a 38.06 _cell.length_b 44.41 _cell.length_c 55.6 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F7F _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H14 N2 O2 S' _chem_comp.formula_weight 226.295 _chem_comp.id WNM _chem_comp.mon_nstd_flag . _chem_comp.name (3S)-1-(phenylsulfonyl)pyrrolidin-3-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C14 WNM doub 376 n y C13 C12 WNM sing 377 n y C14 C15 WNM sing 378 n y C12 C11 WNM doub 379 n y C15 C10 WNM doub 380 n y C11 C10 WNM sing 381 n y C10 S07 WNM sing 382 n n S07 O08 WNM doub 383 n n S07 O09 WNM doub 384 n n S07 N05 WNM sing 385 n n N05 C06 WNM sing 386 n n N05 C04 WNM sing 387 n n C06 C02 WNM sing 388 n n C04 C03 WNM sing 389 n n C02 C03 WNM sing 390 n n C02 N01 WNM sing 391 n n C13 H1 WNM sing 392 n n C15 H2 WNM sing 393 n n C02 H3 WNM sing 394 n n C03 H4 WNM sing 395 n n C03 H5 WNM sing 396 n n C04 H6 WNM sing 397 n n C04 H7 WNM sing 398 n n C06 H8 WNM sing 399 n n C06 H9 WNM sing 400 n n C11 H10 WNM sing 401 n n C12 H11 WNM sing 402 n n C14 H12 WNM sing 403 n n N01 H13 WNM sing 404 n n N01 H14 WNM sing 405 n n # _atom_sites.entry_id 9F7F _atom_sites.fract_transf_matrix[1][1] 0.026274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001934 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018034 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WNM A 1 201 201 WNM LIG . C 3 HOH A 1 301 147 HOH HOH . C 3 HOH A 2 302 32 HOH HOH . C 3 HOH A 3 303 197 HOH HOH . C 3 HOH A 4 304 40 HOH HOH . C 3 HOH A 5 305 112 HOH HOH . C 3 HOH A 6 306 70 HOH HOH . C 3 HOH A 7 307 84 HOH HOH . C 3 HOH A 8 308 151 HOH HOH . C 3 HOH A 9 309 123 HOH HOH . C 3 HOH A 10 310 77 HOH HOH . C 3 HOH A 11 311 194 HOH HOH . C 3 HOH A 12 312 19 HOH HOH . C 3 HOH A 13 313 80 HOH HOH . C 3 HOH A 14 314 111 HOH HOH . C 3 HOH A 15 315 132 HOH HOH . C 3 HOH A 16 316 2 HOH HOH . C 3 HOH A 17 317 78 HOH HOH . C 3 HOH A 18 318 68 HOH HOH . C 3 HOH A 19 319 5 HOH HOH . C 3 HOH A 20 320 37 HOH HOH . C 3 HOH A 21 321 167 HOH HOH . C 3 HOH A 22 322 79 HOH HOH . C 3 HOH A 23 323 98 HOH HOH . C 3 HOH A 24 324 172 HOH HOH . C 3 HOH A 25 325 144 HOH HOH . C 3 HOH A 26 326 169 HOH HOH . C 3 HOH A 27 327 53 HOH HOH . C 3 HOH A 28 328 122 HOH HOH . C 3 HOH A 29 329 69 HOH HOH . C 3 HOH A 30 330 140 HOH HOH . C 3 HOH A 31 331 87 HOH HOH . C 3 HOH A 32 332 28 HOH HOH . C 3 HOH A 33 333 86 HOH HOH . C 3 HOH A 34 334 88 HOH HOH . C 3 HOH A 35 335 92 HOH HOH . C 3 HOH A 36 336 108 HOH HOH . C 3 HOH A 37 337 97 HOH HOH . C 3 HOH A 38 338 205 HOH HOH . C 3 HOH A 39 339 27 HOH HOH . C 3 HOH A 40 340 3 HOH HOH . C 3 HOH A 41 341 99 HOH HOH . C 3 HOH A 42 342 82 HOH HOH . C 3 HOH A 43 343 109 HOH HOH . C 3 HOH A 44 344 33 HOH HOH . C 3 HOH A 45 345 52 HOH HOH . C 3 HOH A 46 346 129 HOH HOH . C 3 HOH A 47 347 6 HOH HOH . C 3 HOH A 48 348 104 HOH HOH . C 3 HOH A 49 349 34 HOH HOH . C 3 HOH A 50 350 8 HOH HOH . C 3 HOH A 51 351 15 HOH HOH . C 3 HOH A 52 352 51 HOH HOH . C 3 HOH A 53 353 41 HOH HOH . C 3 HOH A 54 354 17 HOH HOH . C 3 HOH A 55 355 177 HOH HOH . C 3 HOH A 56 356 36 HOH HOH . C 3 HOH A 57 357 11 HOH HOH . C 3 HOH A 58 358 38 HOH HOH . C 3 HOH A 59 359 176 HOH HOH . C 3 HOH A 60 360 106 HOH HOH . C 3 HOH A 61 361 48 HOH HOH . C 3 HOH A 62 362 16 HOH HOH . C 3 HOH A 63 363 1 HOH HOH . C 3 HOH A 64 364 39 HOH HOH . C 3 HOH A 65 365 35 HOH HOH . C 3 HOH A 66 366 4 HOH HOH . C 3 HOH A 67 367 59 HOH HOH . C 3 HOH A 68 368 133 HOH HOH . C 3 HOH A 69 369 81 HOH HOH . C 3 HOH A 70 370 60 HOH HOH . C 3 HOH A 71 371 118 HOH HOH . C 3 HOH A 72 372 12 HOH HOH . C 3 HOH A 73 373 55 HOH HOH . C 3 HOH A 74 374 120 HOH HOH . C 3 HOH A 75 375 93 HOH HOH . C 3 HOH A 76 376 127 HOH HOH . C 3 HOH A 77 377 65 HOH HOH . C 3 HOH A 78 378 212 HOH HOH . C 3 HOH A 79 379 164 HOH HOH . C 3 HOH A 80 380 96 HOH HOH . C 3 HOH A 81 381 29 HOH HOH . C 3 HOH A 82 382 165 HOH HOH . C 3 HOH A 83 383 9 HOH HOH . C 3 HOH A 84 384 20 HOH HOH . C 3 HOH A 85 385 73 HOH HOH . C 3 HOH A 86 386 7 HOH HOH . C 3 HOH A 87 387 24 HOH HOH . C 3 HOH A 88 388 25 HOH HOH . C 3 HOH A 89 389 189 HOH HOH . C 3 HOH A 90 390 26 HOH HOH . C 3 HOH A 91 391 71 HOH HOH . C 3 HOH A 92 392 61 HOH HOH . C 3 HOH A 93 393 21 HOH HOH . C 3 HOH A 94 394 43 HOH HOH . C 3 HOH A 95 395 128 HOH HOH . C 3 HOH A 96 396 208 HOH HOH . C 3 HOH A 97 397 46 HOH HOH . C 3 HOH A 98 398 101 HOH HOH . C 3 HOH A 99 399 49 HOH HOH . C 3 HOH A 100 400 178 HOH HOH . C 3 HOH A 101 401 110 HOH HOH . C 3 HOH A 102 402 22 HOH HOH . C 3 HOH A 103 403 72 HOH HOH . C 3 HOH A 104 404 200 HOH HOH . C 3 HOH A 105 405 31 HOH HOH . C 3 HOH A 106 406 18 HOH HOH . C 3 HOH A 107 407 90 HOH HOH . C 3 HOH A 108 408 56 HOH HOH . C 3 HOH A 109 409 154 HOH HOH . C 3 HOH A 110 410 23 HOH HOH . C 3 HOH A 111 411 121 HOH HOH . C 3 HOH A 112 412 158 HOH HOH . C 3 HOH A 113 413 66 HOH HOH . C 3 HOH A 114 414 113 HOH HOH . C 3 HOH A 115 415 138 HOH HOH . C 3 HOH A 116 416 162 HOH HOH . C 3 HOH A 117 417 156 HOH HOH . C 3 HOH A 118 418 150 HOH HOH . C 3 HOH A 119 419 126 HOH HOH . C 3 HOH A 120 420 57 HOH HOH . C 3 HOH A 121 421 47 HOH HOH . C 3 HOH A 122 422 42 HOH HOH . C 3 HOH A 123 423 100 HOH HOH . C 3 HOH A 124 424 83 HOH HOH . C 3 HOH A 125 425 174 HOH HOH . C 3 HOH A 126 426 136 HOH HOH . C 3 HOH A 127 427 107 HOH HOH . C 3 HOH A 128 428 13 HOH HOH . C 3 HOH A 129 429 141 HOH HOH . C 3 HOH A 130 430 114 HOH HOH . C 3 HOH A 131 431 64 HOH HOH . C 3 HOH A 132 432 54 HOH HOH . C 3 HOH A 133 433 44 HOH HOH . C 3 HOH A 134 434 14 HOH HOH . C 3 HOH A 135 435 75 HOH HOH . C 3 HOH A 136 436 149 HOH HOH . C 3 HOH A 137 437 209 HOH HOH . C 3 HOH A 138 438 10 HOH HOH . C 3 HOH A 139 439 182 HOH HOH . C 3 HOH A 140 440 163 HOH HOH . C 3 HOH A 141 441 85 HOH HOH . C 3 HOH A 142 442 142 HOH HOH . C 3 HOH A 143 443 166 HOH HOH . C 3 HOH A 144 444 62 HOH HOH . C 3 HOH A 145 445 30 HOH HOH . C 3 HOH A 146 446 103 HOH HOH . C 3 HOH A 147 447 50 HOH HOH . C 3 HOH A 148 448 130 HOH HOH . C 3 HOH A 149 449 191 HOH HOH . C 3 HOH A 150 450 63 HOH HOH . C 3 HOH A 151 451 184 HOH HOH . C 3 HOH A 152 452 206 HOH HOH . C 3 HOH A 153 453 105 HOH HOH . C 3 HOH A 154 454 161 HOH HOH . C 3 HOH A 155 455 91 HOH HOH . C 3 HOH A 156 456 116 HOH HOH . C 3 HOH A 157 457 94 HOH HOH . C 3 HOH A 158 458 160 HOH HOH . C 3 HOH A 159 459 186 HOH HOH . C 3 HOH A 160 460 95 HOH HOH . C 3 HOH A 161 461 148 HOH HOH . C 3 HOH A 162 462 201 HOH HOH . C 3 HOH A 163 463 202 HOH HOH . C 3 HOH A 164 464 119 HOH HOH . C 3 HOH A 165 465 173 HOH HOH . C 3 HOH A 166 466 139 HOH HOH . C 3 HOH A 167 467 204 HOH HOH . C 3 HOH A 168 468 190 HOH HOH . C 3 HOH A 169 469 143 HOH HOH . C 3 HOH A 170 470 115 HOH HOH . C 3 HOH A 171 471 125 HOH HOH . C 3 HOH A 172 472 89 HOH HOH . C 3 HOH A 173 473 171 HOH HOH . C 3 HOH A 174 474 181 HOH HOH . C 3 HOH A 175 475 76 HOH HOH . C 3 HOH A 176 476 168 HOH HOH . C 3 HOH A 177 477 137 HOH HOH . C 3 HOH A 178 478 179 HOH HOH . C 3 HOH A 179 479 134 HOH HOH . C 3 HOH A 180 480 195 HOH HOH . C 3 HOH A 181 481 135 HOH HOH . C 3 HOH A 182 482 58 HOH HOH . C 3 HOH A 183 483 203 HOH HOH . C 3 HOH A 184 484 183 HOH HOH . C 3 HOH A 185 485 187 HOH HOH . C 3 HOH A 186 486 185 HOH HOH . C 3 HOH A 187 487 175 HOH HOH . C 3 HOH A 188 488 207 HOH HOH . C 3 HOH A 189 489 170 HOH HOH . C 3 HOH A 190 490 180 HOH HOH . C 3 HOH A 191 491 152 HOH HOH . C 3 HOH A 192 492 145 HOH HOH . C 3 HOH A 193 493 45 HOH HOH . C 3 HOH A 194 494 153 HOH HOH . C 3 HOH A 195 495 210 HOH HOH . C 3 HOH A 196 496 192 HOH HOH . C 3 HOH A 197 497 102 HOH HOH . C 3 HOH A 198 498 146 HOH HOH . C 3 HOH A 199 499 67 HOH HOH . C 3 HOH A 200 500 157 HOH HOH . C 3 HOH A 201 501 131 HOH HOH . C 3 HOH A 202 502 199 HOH HOH . C 3 HOH A 203 503 74 HOH HOH . C 3 HOH A 204 504 196 HOH HOH . C 3 HOH A 205 505 117 HOH HOH . C 3 HOH A 206 506 124 HOH HOH . C 3 HOH A 207 507 198 HOH HOH . C 3 HOH A 208 508 193 HOH HOH . C 3 HOH A 209 509 211 HOH HOH . C 3 HOH A 210 510 155 HOH HOH . C 3 HOH A 211 511 188 HOH HOH . C 3 HOH A 212 512 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WNM . . . B 2 -4.759 -10.436 2.565 0.79 13.82 ? C10 WNM 201 A 1 HETATM 2 C C13 WNM . . . B 2 -5.147 -10.437 5.399 0.79 13.1 ? C13 WNM 201 A 1 HETATM 3 C C15 WNM . . . B 2 -5.977 -10.775 3.159 0.79 14.91 ? C15 WNM 201 A 1 HETATM 4 C C02 WNM . . . B 2 -3.055 -14.022 -0.326 0.79 22 ? C02 WNM 201 A 1 HETATM 5 C C03 WNM . . . B 2 -4.543 -14.328 -0.357 0.79 24.61 ? C03 WNM 201 A 1 HETATM 6 C C04 WNM . . . B 2 -5.261 -12.989 -0.108 0.79 19.63 ? C04 WNM 201 A 1 HETATM 7 C C06 WNM . . . B 2 -2.934 -12.678 0.394 0.79 22.86 ? C06 WNM 201 A 1 HETATM 8 C C11 WNM . . . B 2 -3.744 -10.113 3.473 0.79 12.48 ? C11 WNM 201 A 1 HETATM 9 C C12 WNM . . . B 2 -3.923 -10.107 4.845 0.79 14.59 ? C12 WNM 201 A 1 HETATM 10 C C14 WNM . . . B 2 -6.179 -10.77 4.529 0.79 17.06 ? C14 WNM 201 A 1 HETATM 11 N N01 WNM . . . B 2 -2.378 -15.092 0.449 0.79 22.09 ? N01 WNM 201 A 1 HETATM 12 N N05 WNM . . . B 2 -4.243 -11.966 0.287 0.79 14.9 ? N05 WNM 201 A 1 HETATM 13 O O08 WNM . . . B 2 -5.759 -10.035 0.298 0.79 16.65 ? O08 WNM 201 A 1 HETATM 14 O O09 WNM . . . B 2 -3.336 -9.721 0.652 0.79 16.17 ? O09 WNM 201 A 1 HETATM 15 S S07 WNM . . . B 2 -4.533 -10.447 0.885 0.79 14.2 ? S07 WNM 201 A 1 HETATM 16 H H1 WNM . . . B 2 -5.308 -10.439 6.491 0.79 15.72 ? H1 WNM 201 A 1 HETATM 17 H H2 WNM . . . B 2 -6.823 -11.06 2.529 0.79 17.89 ? H2 WNM 201 A 1 HETATM 18 H H3 WNM . . . B 2 -2.674 -13.89 -1.376 0.79 26.4 ? H3 WNM 201 A 1 HETATM 19 H H4 WNM . . . B 2 -4.834 -14.8 -1.316 0.79 29.53 ? H4 WNM 201 A 1 HETATM 20 H H5 WNM . . . B 2 -4.807 -15.102 0.39 0.79 29.53 ? H5 WNM 201 A 1 HETATM 21 H H6 WNM . . . B 2 -5.817 -12.701 -1.03 0.79 23.56 ? H6 WNM 201 A 1 HETATM 22 H H7 WNM . . . B 2 -6.04 -13.137 0.674 0.79 23.56 ? H7 WNM 201 A 1 HETATM 23 H H8 WNM . . . B 2 -2.111 -12.093 -0.064 0.79 27.43 ? H8 WNM 201 A 1 HETATM 24 H H9 WNM . . . B 2 -2.65 -12.856 1.451 0.79 27.43 ? H9 WNM 201 A 1 HETATM 25 H H10 WNM . . . B 2 -2.751 -9.848 3.098 0.79 14.98 ? H10 WNM 201 A 1 HETATM 26 H H11 WNM . . . B 2 -3.097 -9.841 5.529 0.79 17.51 ? H11 WNM 201 A 1 HETATM 27 H H12 WNM . . . B 2 -7.156 -11.03 4.957 0.79 20.47 ? H12 WNM 201 A 1 HETATM 28 H H13 WNM . . . B 2 -2.933 -15.946 0.498 0.79 26.51 ? H13 WNM 201 A 1 HETATM 29 H H14 WNM . . . B 2 -2.138 -14.812 1.379 0.79 26.51 ? H14 WNM 201 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 29 #