data_9F8H # _model_server_result.job_id cYvlw_aTtTEyfmRrOHIqNQ _model_server_result.datetime_utc '2025-06-20 21:15:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 9F8H # _exptl.entry_id 9F8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.08 _cell.angle_gamma 90 _cell.entry_id 9F8H _cell.length_a 54.039 _cell.length_b 69.099 _cell.length_c 54.217 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 138 n n C1 C2 GOL sing 139 n n C1 H11 GOL sing 140 n n C1 H12 GOL sing 141 n n O1 HO1 GOL sing 142 n n C2 O2 GOL sing 143 n n C2 C3 GOL sing 144 n n C2 H2 GOL sing 145 n n O2 HO2 GOL sing 146 n n C3 O3 GOL sing 147 n n C3 H31 GOL sing 148 n n C3 H32 GOL sing 149 n n O3 HO3 GOL sing 150 n n # _atom_sites.entry_id 9F8H _atom_sites.fract_transf_matrix[1][1] 0.018505 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003624 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RAL A 1 201 201 RAL RAL . D 3 GOL A 1 202 202 GOL GOL . E 4 EDO A 1 203 203 EDO EDO . F 2 RAL B 1 201 201 RAL RAL . G 3 GOL B 1 202 202 GOL GOL . H 5 HOH A 1 301 319 HOH HOH . H 5 HOH A 2 302 40 HOH HOH . H 5 HOH A 3 303 74 HOH HOH . H 5 HOH A 4 304 317 HOH HOH . H 5 HOH A 5 305 152 HOH HOH . H 5 HOH A 6 306 57 HOH HOH . H 5 HOH A 7 307 18 HOH HOH . H 5 HOH A 8 308 55 HOH HOH . H 5 HOH A 9 309 7 HOH HOH . H 5 HOH A 10 310 187 HOH HOH . H 5 HOH A 11 311 174 HOH HOH . H 5 HOH A 12 312 127 HOH HOH . H 5 HOH A 13 313 20 HOH HOH . H 5 HOH A 14 314 82 HOH HOH . H 5 HOH A 15 315 241 HOH HOH . H 5 HOH A 16 316 231 HOH HOH . H 5 HOH A 17 317 312 HOH HOH . H 5 HOH A 18 318 149 HOH HOH . H 5 HOH A 19 319 130 HOH HOH . H 5 HOH A 20 320 228 HOH HOH . H 5 HOH A 21 321 150 HOH HOH . H 5 HOH A 22 322 89 HOH HOH . H 5 HOH A 23 323 32 HOH HOH . H 5 HOH A 24 324 96 HOH HOH . H 5 HOH A 25 325 5 HOH HOH . H 5 HOH A 26 326 334 HOH HOH . H 5 HOH A 27 327 52 HOH HOH . H 5 HOH A 28 328 205 HOH HOH . H 5 HOH A 29 329 101 HOH HOH . H 5 HOH A 30 330 202 HOH HOH . H 5 HOH A 31 331 280 HOH HOH . H 5 HOH A 32 332 24 HOH HOH . H 5 HOH A 33 333 137 HOH HOH . H 5 HOH A 34 334 151 HOH HOH . H 5 HOH A 35 335 165 HOH HOH . H 5 HOH A 36 336 33 HOH HOH . H 5 HOH A 37 337 328 HOH HOH . H 5 HOH A 38 338 124 HOH HOH . H 5 HOH A 39 339 341 HOH HOH . H 5 HOH A 40 340 1 HOH HOH . H 5 HOH A 41 341 37 HOH HOH . H 5 HOH A 42 342 84 HOH HOH . H 5 HOH A 43 343 184 HOH HOH . H 5 HOH A 44 344 148 HOH HOH . H 5 HOH A 45 345 257 HOH HOH . H 5 HOH A 46 346 60 HOH HOH . H 5 HOH A 47 347 61 HOH HOH . H 5 HOH A 48 348 204 HOH HOH . H 5 HOH A 49 349 23 HOH HOH . H 5 HOH A 50 350 251 HOH HOH . H 5 HOH A 51 351 172 HOH HOH . H 5 HOH A 52 352 90 HOH HOH . H 5 HOH A 53 353 179 HOH HOH . H 5 HOH A 54 354 51 HOH HOH . H 5 HOH A 55 355 14 HOH HOH . H 5 HOH A 56 356 254 HOH HOH . H 5 HOH A 57 357 6 HOH HOH . H 5 HOH A 58 358 58 HOH HOH . H 5 HOH A 59 359 180 HOH HOH . H 5 HOH A 60 360 329 HOH HOH . H 5 HOH A 61 361 34 HOH HOH . H 5 HOH A 62 362 68 HOH HOH . H 5 HOH A 63 363 19 HOH HOH . H 5 HOH A 64 364 30 HOH HOH . H 5 HOH A 65 365 211 HOH HOH . H 5 HOH A 66 366 164 HOH HOH . H 5 HOH A 67 367 230 HOH HOH . H 5 HOH A 68 368 262 HOH HOH . H 5 HOH A 69 369 103 HOH HOH . H 5 HOH A 70 370 337 HOH HOH . H 5 HOH A 71 371 112 HOH HOH . H 5 HOH A 72 372 75 HOH HOH . H 5 HOH A 73 373 100 HOH HOH . H 5 HOH A 74 374 64 HOH HOH . H 5 HOH A 75 375 138 HOH HOH . H 5 HOH A 76 376 126 HOH HOH . H 5 HOH A 77 377 279 HOH HOH . H 5 HOH A 78 378 25 HOH HOH . H 5 HOH A 79 379 94 HOH HOH . H 5 HOH A 80 380 327 HOH HOH . H 5 HOH A 81 381 27 HOH HOH . H 5 HOH A 82 382 167 HOH HOH . H 5 HOH A 83 383 56 HOH HOH . H 5 HOH A 84 384 105 HOH HOH . H 5 HOH A 85 385 88 HOH HOH . H 5 HOH A 86 386 340 HOH HOH . H 5 HOH A 87 387 54 HOH HOH . H 5 HOH A 88 388 339 HOH HOH . H 5 HOH A 89 389 47 HOH HOH . H 5 HOH A 90 390 141 HOH HOH . H 5 HOH A 91 391 116 HOH HOH . H 5 HOH A 92 392 83 HOH HOH . H 5 HOH A 93 393 44 HOH HOH . H 5 HOH A 94 394 65 HOH HOH . H 5 HOH A 95 395 308 HOH HOH . H 5 HOH A 96 396 21 HOH HOH . H 5 HOH A 97 397 107 HOH HOH . H 5 HOH A 98 398 128 HOH HOH . H 5 HOH A 99 399 170 HOH HOH . H 5 HOH A 100 400 17 HOH HOH . H 5 HOH A 101 401 316 HOH HOH . H 5 HOH A 102 402 213 HOH HOH . H 5 HOH A 103 403 118 HOH HOH . H 5 HOH A 104 404 125 HOH HOH . H 5 HOH A 105 405 188 HOH HOH . H 5 HOH A 106 406 93 HOH HOH . H 5 HOH A 107 407 59 HOH HOH . H 5 HOH A 108 408 81 HOH HOH . H 5 HOH A 109 409 15 HOH HOH . H 5 HOH A 110 410 307 HOH HOH . H 5 HOH A 111 411 295 HOH HOH . H 5 HOH A 112 412 330 HOH HOH . H 5 HOH A 113 413 333 HOH HOH . H 5 HOH A 114 414 16 HOH HOH . H 5 HOH A 115 415 250 HOH HOH . H 5 HOH A 116 416 318 HOH HOH . H 5 HOH A 117 417 175 HOH HOH . H 5 HOH A 118 418 225 HOH HOH . H 5 HOH A 119 419 114 HOH HOH . H 5 HOH A 120 420 120 HOH HOH . H 5 HOH A 121 421 115 HOH HOH . H 5 HOH A 122 422 132 HOH HOH . H 5 HOH A 123 423 229 HOH HOH . H 5 HOH A 124 424 72 HOH HOH . H 5 HOH A 125 425 322 HOH HOH . H 5 HOH A 126 426 338 HOH HOH . H 5 HOH A 127 427 282 HOH HOH . H 5 HOH A 128 428 290 HOH HOH . H 5 HOH A 129 429 286 HOH HOH . H 5 HOH A 130 430 243 HOH HOH . H 5 HOH A 131 431 240 HOH HOH . H 5 HOH A 132 432 314 HOH HOH . H 5 HOH A 133 433 320 HOH HOH . H 5 HOH A 134 434 278 HOH HOH . H 5 HOH A 135 435 63 HOH HOH . H 5 HOH A 136 436 146 HOH HOH . H 5 HOH A 137 437 176 HOH HOH . I 5 HOH B 1 301 256 HOH HOH . I 5 HOH B 2 302 163 HOH HOH . I 5 HOH B 3 303 182 HOH HOH . I 5 HOH B 4 304 153 HOH HOH . I 5 HOH B 5 305 134 HOH HOH . I 5 HOH B 6 306 41 HOH HOH . I 5 HOH B 7 307 36 HOH HOH . I 5 HOH B 8 308 185 HOH HOH . I 5 HOH B 9 309 48 HOH HOH . I 5 HOH B 10 310 161 HOH HOH . I 5 HOH B 11 311 12 HOH HOH . I 5 HOH B 12 312 186 HOH HOH . I 5 HOH B 13 313 221 HOH HOH . I 5 HOH B 14 314 136 HOH HOH . I 5 HOH B 15 315 195 HOH HOH . I 5 HOH B 16 316 35 HOH HOH . I 5 HOH B 17 317 2 HOH HOH . I 5 HOH B 18 318 4 HOH HOH . I 5 HOH B 19 319 39 HOH HOH . I 5 HOH B 20 320 79 HOH HOH . I 5 HOH B 21 321 95 HOH HOH . I 5 HOH B 22 322 135 HOH HOH . I 5 HOH B 23 323 3 HOH HOH . I 5 HOH B 24 324 343 HOH HOH . I 5 HOH B 25 325 49 HOH HOH . I 5 HOH B 26 326 46 HOH HOH . I 5 HOH B 27 327 104 HOH HOH . I 5 HOH B 28 328 78 HOH HOH . I 5 HOH B 29 329 190 HOH HOH . I 5 HOH B 30 330 193 HOH HOH . I 5 HOH B 31 331 191 HOH HOH . I 5 HOH B 32 332 110 HOH HOH . I 5 HOH B 33 333 226 HOH HOH . I 5 HOH B 34 334 168 HOH HOH . I 5 HOH B 35 335 157 HOH HOH . I 5 HOH B 36 336 309 HOH HOH . I 5 HOH B 37 337 76 HOH HOH . I 5 HOH B 38 338 9 HOH HOH . I 5 HOH B 39 339 67 HOH HOH . I 5 HOH B 40 340 140 HOH HOH . I 5 HOH B 41 341 29 HOH HOH . I 5 HOH B 42 342 31 HOH HOH . I 5 HOH B 43 343 321 HOH HOH . I 5 HOH B 44 344 53 HOH HOH . I 5 HOH B 45 345 8 HOH HOH . I 5 HOH B 46 346 313 HOH HOH . I 5 HOH B 47 347 310 HOH HOH . I 5 HOH B 48 348 171 HOH HOH . I 5 HOH B 49 349 13 HOH HOH . I 5 HOH B 50 350 123 HOH HOH . I 5 HOH B 51 351 109 HOH HOH . I 5 HOH B 52 352 28 HOH HOH . I 5 HOH B 53 353 323 HOH HOH . I 5 HOH B 54 354 178 HOH HOH . I 5 HOH B 55 355 305 HOH HOH . I 5 HOH B 56 356 210 HOH HOH . I 5 HOH B 57 357 102 HOH HOH . I 5 HOH B 58 358 43 HOH HOH . I 5 HOH B 59 359 73 HOH HOH . I 5 HOH B 60 360 92 HOH HOH . I 5 HOH B 61 361 121 HOH HOH . I 5 HOH B 62 362 133 HOH HOH . I 5 HOH B 63 363 155 HOH HOH . I 5 HOH B 64 364 97 HOH HOH . I 5 HOH B 65 365 284 HOH HOH . I 5 HOH B 66 366 242 HOH HOH . I 5 HOH B 67 367 324 HOH HOH . I 5 HOH B 68 368 99 HOH HOH . I 5 HOH B 69 369 113 HOH HOH . I 5 HOH B 70 370 199 HOH HOH . I 5 HOH B 71 371 62 HOH HOH . I 5 HOH B 72 372 10 HOH HOH . I 5 HOH B 73 373 45 HOH HOH . I 5 HOH B 74 374 70 HOH HOH . I 5 HOH B 75 375 336 HOH HOH . I 5 HOH B 76 376 131 HOH HOH . I 5 HOH B 77 377 159 HOH HOH . I 5 HOH B 78 378 325 HOH HOH . I 5 HOH B 79 379 98 HOH HOH . I 5 HOH B 80 380 189 HOH HOH . I 5 HOH B 81 381 200 HOH HOH . I 5 HOH B 82 382 85 HOH HOH . I 5 HOH B 83 383 77 HOH HOH . I 5 HOH B 84 384 306 HOH HOH . I 5 HOH B 85 385 108 HOH HOH . I 5 HOH B 86 386 162 HOH HOH . I 5 HOH B 87 387 80 HOH HOH . I 5 HOH B 88 388 248 HOH HOH . I 5 HOH B 89 389 87 HOH HOH . I 5 HOH B 90 390 50 HOH HOH . I 5 HOH B 91 391 69 HOH HOH . I 5 HOH B 92 392 111 HOH HOH . I 5 HOH B 93 393 42 HOH HOH . I 5 HOH B 94 394 38 HOH HOH . I 5 HOH B 95 395 71 HOH HOH . I 5 HOH B 96 396 296 HOH HOH . I 5 HOH B 97 397 91 HOH HOH . I 5 HOH B 98 398 227 HOH HOH . I 5 HOH B 99 399 11 HOH HOH . I 5 HOH B 100 400 119 HOH HOH . I 5 HOH B 101 401 154 HOH HOH . I 5 HOH B 102 402 217 HOH HOH . I 5 HOH B 103 403 117 HOH HOH . I 5 HOH B 104 404 22 HOH HOH . I 5 HOH B 105 405 332 HOH HOH . I 5 HOH B 106 406 264 HOH HOH . I 5 HOH B 107 407 143 HOH HOH . I 5 HOH B 108 408 223 HOH HOH . I 5 HOH B 109 409 158 HOH HOH . I 5 HOH B 110 410 342 HOH HOH . I 5 HOH B 111 411 335 HOH HOH . I 5 HOH B 112 412 311 HOH HOH . I 5 HOH B 113 413 237 HOH HOH . I 5 HOH B 114 414 326 HOH HOH . I 5 HOH B 115 415 331 HOH HOH . I 5 HOH B 116 416 144 HOH HOH . I 5 HOH B 117 417 301 HOH HOH . I 5 HOH B 118 418 197 HOH HOH . I 5 HOH B 119 419 139 HOH HOH . I 5 HOH B 120 420 129 HOH HOH . I 5 HOH B 121 421 220 HOH HOH . I 5 HOH B 122 422 192 HOH HOH . I 5 HOH B 123 423 238 HOH HOH . I 5 HOH B 124 424 247 HOH HOH . I 5 HOH B 125 425 177 HOH HOH . I 5 HOH B 126 426 288 HOH HOH . I 5 HOH B 127 427 232 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 -11.566 22.955 38.006 1 22.78 ? C1 GOL 202 B 1 HETATM 2 O O1 GOL . . . G 3 -12.869 22.843 38.457 1 26.39 ? O1 GOL 202 B 1 HETATM 3 C C2 GOL . . . G 3 -11.056 21.664 37.72 1 23.12 ? C2 GOL 202 B 1 HETATM 4 O O2 GOL . . . G 3 -11.916 20.962 36.827 1 24.66 ? O2 GOL 202 B 1 HETATM 5 C C3 GOL . . . G 3 -9.694 21.889 36.986 1 23.57 ? C3 GOL 202 B 1 HETATM 6 O O3 GOL . . . G 3 -9.024 20.572 36.787 1 21.9 ? O3 GOL 202 B 1 HETATM 7 H H11 GOL . . . G 3 -10.987 23.39 38.652 1 27.33 ? H11 GOL 202 B 1 HETATM 8 H H12 GOL . . . G 3 -11.519 23.505 37.21 1 27.33 ? H12 GOL 202 B 1 HETATM 9 H HO1 GOL . . . G 3 -12.841 22.932 39.302 1 31.66 ? HO1 GOL 202 B 1 HETATM 10 H H2 GOL . . . G 3 -10.966 21.123 38.52 1 27.75 ? H2 GOL 202 B 1 HETATM 11 H HO2 GOL . . . G 3 -11.429 20.551 36.264 1 29.59 ? HO2 GOL 202 B 1 HETATM 12 H H31 GOL . . . G 3 -9.162 22.519 37.497 1 28.28 ? H31 GOL 202 B 1 HETATM 13 H H32 GOL . . . G 3 -9.859 22.334 36.14 1 28.28 ? H32 GOL 202 B 1 HETATM 14 H HO3 GOL . . . G 3 -8.94 20.465 35.948 1 26.28 ? HO3 GOL 202 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #