data_9F8S # _model_server_result.job_id p-NbZbRtzQp5jAwM2PYqYQ _model_server_result.datetime_utc '2025-06-22 18:38:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f8s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 9F8S # _exptl.entry_id 9F8S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.31 _cell.angle_gamma 90 _cell.entry_id 9F8S _cell.length_a 54.018 _cell.length_b 68.9 _cell.length_c 54.082 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F8S _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 170 n n C1 C2 GOL sing 171 n n C1 H11 GOL sing 172 n n C1 H12 GOL sing 173 n n O1 HO1 GOL sing 174 n n C2 O2 GOL sing 175 n n C2 C3 GOL sing 176 n n C2 H2 GOL sing 177 n n O2 HO2 GOL sing 178 n n C3 O3 GOL sing 179 n n C3 H31 GOL sing 180 n n C3 H32 GOL sing 181 n n O3 HO3 GOL sing 182 n n # _atom_sites.entry_id 9F8S _atom_sites.fract_transf_matrix[1][1] 0.018512 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003368 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018794 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 202 GOL GOL . D 2 GOL A 1 202 204 GOL GOL . E 3 A1IAM A 1 203 210 A1IAM Z74 . F 2 GOL B 1 201 202 GOL GOL . G 3 A1IAM B 1 202 206 A1IAM Z74 . H 4 HOH A 1 301 99 HOH HOH . H 4 HOH A 2 302 34 HOH HOH . H 4 HOH A 3 303 88 HOH HOH . H 4 HOH A 4 304 63 HOH HOH . H 4 HOH A 5 305 347 HOH HOH . H 4 HOH A 6 306 194 HOH HOH . H 4 HOH A 7 307 29 HOH HOH . H 4 HOH A 8 308 229 HOH HOH . H 4 HOH A 9 309 233 HOH HOH . H 4 HOH A 10 310 101 HOH HOH . H 4 HOH A 11 311 111 HOH HOH . H 4 HOH A 12 312 151 HOH HOH . H 4 HOH A 13 313 165 HOH HOH . H 4 HOH A 14 314 70 HOH HOH . H 4 HOH A 15 315 246 HOH HOH . H 4 HOH A 16 316 20 HOH HOH . H 4 HOH A 17 317 136 HOH HOH . H 4 HOH A 18 318 12 HOH HOH . H 4 HOH A 19 319 126 HOH HOH . H 4 HOH A 20 320 97 HOH HOH . H 4 HOH A 21 321 174 HOH HOH . H 4 HOH A 22 322 35 HOH HOH . H 4 HOH A 23 323 69 HOH HOH . H 4 HOH A 24 324 30 HOH HOH . H 4 HOH A 25 325 10 HOH HOH . H 4 HOH A 26 326 3 HOH HOH . H 4 HOH A 27 327 77 HOH HOH . H 4 HOH A 28 328 143 HOH HOH . H 4 HOH A 29 329 13 HOH HOH . H 4 HOH A 30 330 83 HOH HOH . H 4 HOH A 31 331 2 HOH HOH . H 4 HOH A 32 332 265 HOH HOH . H 4 HOH A 33 333 23 HOH HOH . H 4 HOH A 34 334 326 HOH HOH . H 4 HOH A 35 335 266 HOH HOH . H 4 HOH A 36 336 276 HOH HOH . H 4 HOH A 37 337 56 HOH HOH . H 4 HOH A 38 338 19 HOH HOH . H 4 HOH A 39 339 66 HOH HOH . H 4 HOH A 40 340 257 HOH HOH . H 4 HOH A 41 341 167 HOH HOH . H 4 HOH A 42 342 199 HOH HOH . H 4 HOH A 43 343 51 HOH HOH . H 4 HOH A 44 344 36 HOH HOH . H 4 HOH A 45 345 258 HOH HOH . H 4 HOH A 46 346 212 HOH HOH . H 4 HOH A 47 347 184 HOH HOH . H 4 HOH A 48 348 32 HOH HOH . H 4 HOH A 49 349 62 HOH HOH . H 4 HOH A 50 350 275 HOH HOH . H 4 HOH A 51 351 173 HOH HOH . H 4 HOH A 52 352 31 HOH HOH . H 4 HOH A 53 353 144 HOH HOH . H 4 HOH A 54 354 293 HOH HOH . H 4 HOH A 55 355 203 HOH HOH . H 4 HOH A 56 356 67 HOH HOH . H 4 HOH A 57 357 109 HOH HOH . H 4 HOH A 58 358 119 HOH HOH . H 4 HOH A 59 359 224 HOH HOH . H 4 HOH A 60 360 87 HOH HOH . H 4 HOH A 61 361 161 HOH HOH . H 4 HOH A 62 362 152 HOH HOH . H 4 HOH A 63 363 145 HOH HOH . H 4 HOH A 64 364 259 HOH HOH . H 4 HOH A 65 365 53 HOH HOH . H 4 HOH A 66 366 175 HOH HOH . H 4 HOH A 67 367 198 HOH HOH . H 4 HOH A 68 368 48 HOH HOH . H 4 HOH A 69 369 64 HOH HOH . H 4 HOH A 70 370 98 HOH HOH . H 4 HOH A 71 371 124 HOH HOH . H 4 HOH A 72 372 228 HOH HOH . H 4 HOH A 73 373 92 HOH HOH . H 4 HOH A 74 374 43 HOH HOH . H 4 HOH A 75 375 59 HOH HOH . H 4 HOH A 76 376 223 HOH HOH . H 4 HOH A 77 377 55 HOH HOH . H 4 HOH A 78 378 360 HOH HOH . H 4 HOH A 79 379 74 HOH HOH . H 4 HOH A 80 380 76 HOH HOH . H 4 HOH A 81 381 134 HOH HOH . H 4 HOH A 82 382 120 HOH HOH . H 4 HOH A 83 383 226 HOH HOH . H 4 HOH A 84 384 256 HOH HOH . H 4 HOH A 85 385 356 HOH HOH . H 4 HOH A 86 386 320 HOH HOH . H 4 HOH A 87 387 215 HOH HOH . H 4 HOH A 88 388 294 HOH HOH . H 4 HOH A 89 389 302 HOH HOH . H 4 HOH A 90 390 100 HOH HOH . H 4 HOH A 91 391 114 HOH HOH . H 4 HOH A 92 392 16 HOH HOH . H 4 HOH A 93 393 105 HOH HOH . H 4 HOH A 94 394 283 HOH HOH . H 4 HOH A 95 395 61 HOH HOH . H 4 HOH A 96 396 213 HOH HOH . H 4 HOH A 97 397 342 HOH HOH . H 4 HOH A 98 398 11 HOH HOH . H 4 HOH A 99 399 170 HOH HOH . H 4 HOH A 100 400 344 HOH HOH . H 4 HOH A 101 401 350 HOH HOH . H 4 HOH A 102 402 353 HOH HOH . H 4 HOH A 103 403 328 HOH HOH . H 4 HOH A 104 404 305 HOH HOH . H 4 HOH A 105 405 140 HOH HOH . H 4 HOH A 106 406 255 HOH HOH . H 4 HOH A 107 407 183 HOH HOH . H 4 HOH A 108 408 231 HOH HOH . H 4 HOH A 109 409 179 HOH HOH . H 4 HOH A 110 410 352 HOH HOH . H 4 HOH A 111 411 113 HOH HOH . H 4 HOH A 112 412 206 HOH HOH . H 4 HOH A 113 413 359 HOH HOH . H 4 HOH A 114 414 153 HOH HOH . H 4 HOH A 115 415 128 HOH HOH . H 4 HOH A 116 416 295 HOH HOH . H 4 HOH A 117 417 75 HOH HOH . H 4 HOH A 118 418 210 HOH HOH . H 4 HOH A 119 419 180 HOH HOH . H 4 HOH A 120 420 274 HOH HOH . H 4 HOH A 121 421 351 HOH HOH . H 4 HOH A 122 422 129 HOH HOH . H 4 HOH A 123 423 314 HOH HOH . H 4 HOH A 124 424 162 HOH HOH . H 4 HOH A 125 425 248 HOH HOH . H 4 HOH A 126 426 316 HOH HOH . H 4 HOH A 127 427 218 HOH HOH . H 4 HOH A 128 428 115 HOH HOH . H 4 HOH A 129 429 362 HOH HOH . I 4 HOH B 1 301 355 HOH HOH . I 4 HOH B 2 302 310 HOH HOH . I 4 HOH B 3 303 313 HOH HOH . I 4 HOH B 4 304 156 HOH HOH . I 4 HOH B 5 305 118 HOH HOH . I 4 HOH B 6 306 358 HOH HOH . I 4 HOH B 7 307 89 HOH HOH . I 4 HOH B 8 308 154 HOH HOH . I 4 HOH B 9 309 130 HOH HOH . I 4 HOH B 10 310 1 HOH HOH . I 4 HOH B 11 311 7 HOH HOH . I 4 HOH B 12 312 107 HOH HOH . I 4 HOH B 13 313 28 HOH HOH . I 4 HOH B 14 314 25 HOH HOH . I 4 HOH B 15 315 292 HOH HOH . I 4 HOH B 16 316 348 HOH HOH . I 4 HOH B 17 317 54 HOH HOH . I 4 HOH B 18 318 21 HOH HOH . I 4 HOH B 19 319 163 HOH HOH . I 4 HOH B 20 320 110 HOH HOH . I 4 HOH B 21 321 357 HOH HOH . I 4 HOH B 22 322 102 HOH HOH . I 4 HOH B 23 323 217 HOH HOH . I 4 HOH B 24 324 50 HOH HOH . I 4 HOH B 25 325 6 HOH HOH . I 4 HOH B 26 326 45 HOH HOH . I 4 HOH B 27 327 9 HOH HOH . I 4 HOH B 28 328 354 HOH HOH . I 4 HOH B 29 329 4 HOH HOH . I 4 HOH B 30 330 116 HOH HOH . I 4 HOH B 31 331 132 HOH HOH . I 4 HOH B 32 332 68 HOH HOH . I 4 HOH B 33 333 14 HOH HOH . I 4 HOH B 34 334 5 HOH HOH . I 4 HOH B 35 335 207 HOH HOH . I 4 HOH B 36 336 159 HOH HOH . I 4 HOH B 37 337 298 HOH HOH . I 4 HOH B 38 338 121 HOH HOH . I 4 HOH B 39 339 96 HOH HOH . I 4 HOH B 40 340 242 HOH HOH . I 4 HOH B 41 341 117 HOH HOH . I 4 HOH B 42 342 37 HOH HOH . I 4 HOH B 43 343 147 HOH HOH . I 4 HOH B 44 344 42 HOH HOH . I 4 HOH B 45 345 208 HOH HOH . I 4 HOH B 46 346 38 HOH HOH . I 4 HOH B 47 347 196 HOH HOH . I 4 HOH B 48 348 177 HOH HOH . I 4 HOH B 49 349 65 HOH HOH . I 4 HOH B 50 350 8 HOH HOH . I 4 HOH B 51 351 91 HOH HOH . I 4 HOH B 52 352 158 HOH HOH . I 4 HOH B 53 353 80 HOH HOH . I 4 HOH B 54 354 46 HOH HOH . I 4 HOH B 55 355 214 HOH HOH . I 4 HOH B 56 356 93 HOH HOH . I 4 HOH B 57 357 49 HOH HOH . I 4 HOH B 58 358 232 HOH HOH . I 4 HOH B 59 359 52 HOH HOH . I 4 HOH B 60 360 82 HOH HOH . I 4 HOH B 61 361 185 HOH HOH . I 4 HOH B 62 362 78 HOH HOH . I 4 HOH B 63 363 141 HOH HOH . I 4 HOH B 64 364 281 HOH HOH . I 4 HOH B 65 365 44 HOH HOH . I 4 HOH B 66 366 155 HOH HOH . I 4 HOH B 67 367 22 HOH HOH . I 4 HOH B 68 368 296 HOH HOH . I 4 HOH B 69 369 72 HOH HOH . I 4 HOH B 70 370 338 HOH HOH . I 4 HOH B 71 371 41 HOH HOH . I 4 HOH B 72 372 86 HOH HOH . I 4 HOH B 73 373 123 HOH HOH . I 4 HOH B 74 374 79 HOH HOH . I 4 HOH B 75 375 106 HOH HOH . I 4 HOH B 76 376 331 HOH HOH . I 4 HOH B 77 377 39 HOH HOH . I 4 HOH B 78 378 58 HOH HOH . I 4 HOH B 79 379 270 HOH HOH . I 4 HOH B 80 380 137 HOH HOH . I 4 HOH B 81 381 345 HOH HOH . I 4 HOH B 82 382 94 HOH HOH . I 4 HOH B 83 383 324 HOH HOH . I 4 HOH B 84 384 312 HOH HOH . I 4 HOH B 85 385 135 HOH HOH . I 4 HOH B 86 386 220 HOH HOH . I 4 HOH B 87 387 200 HOH HOH . I 4 HOH B 88 388 57 HOH HOH . I 4 HOH B 89 389 263 HOH HOH . I 4 HOH B 90 390 268 HOH HOH . I 4 HOH B 91 391 267 HOH HOH . I 4 HOH B 92 392 278 HOH HOH . I 4 HOH B 93 393 18 HOH HOH . I 4 HOH B 94 394 47 HOH HOH . I 4 HOH B 95 395 346 HOH HOH . I 4 HOH B 96 396 176 HOH HOH . I 4 HOH B 97 397 322 HOH HOH . I 4 HOH B 98 398 90 HOH HOH . I 4 HOH B 99 399 84 HOH HOH . I 4 HOH B 100 400 361 HOH HOH . I 4 HOH B 101 401 323 HOH HOH . I 4 HOH B 102 402 301 HOH HOH . I 4 HOH B 103 403 26 HOH HOH . I 4 HOH B 104 404 262 HOH HOH . I 4 HOH B 105 405 333 HOH HOH . I 4 HOH B 106 406 334 HOH HOH . I 4 HOH B 107 407 190 HOH HOH . I 4 HOH B 108 408 325 HOH HOH . I 4 HOH B 109 409 363 HOH HOH . I 4 HOH B 110 410 321 HOH HOH . I 4 HOH B 111 411 187 HOH HOH . I 4 HOH B 112 412 181 HOH HOH . I 4 HOH B 113 413 191 HOH HOH . I 4 HOH B 114 414 280 HOH HOH . I 4 HOH B 115 415 238 HOH HOH . I 4 HOH B 116 416 330 HOH HOH . I 4 HOH B 117 417 138 HOH HOH . I 4 HOH B 118 418 336 HOH HOH . I 4 HOH B 119 419 271 HOH HOH . I 4 HOH B 120 420 230 HOH HOH . I 4 HOH B 121 421 182 HOH HOH . I 4 HOH B 122 422 73 HOH HOH . I 4 HOH B 123 423 289 HOH HOH . I 4 HOH B 124 424 340 HOH HOH . I 4 HOH B 125 425 349 HOH HOH . I 4 HOH B 126 426 240 HOH HOH . I 4 HOH B 127 427 317 HOH HOH . I 4 HOH B 128 428 241 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 2 -11.028 22.811 38.058 1 23.74 ? C1 GOL 201 B 1 HETATM 2 O O1 GOL . . . F 2 -12.405 22.676 38.329 1 26.67 ? O1 GOL 201 B 1 HETATM 3 C C2 GOL . . . F 2 -10.502 21.406 37.695 1 20.85 ? C2 GOL 201 B 1 HETATM 4 O O2 GOL . . . F 2 -11.346 20.791 36.796 1 23.31 ? O2 GOL 201 B 1 HETATM 5 C C3 GOL . . . F 2 -9.098 21.652 37.154 1 21.53 ? C3 GOL 201 B 1 HETATM 6 O O3 GOL . . . F 2 -8.542 20.39 36.886 1 20.73 ? O3 GOL 201 B 1 HETATM 7 H H11 GOL . . . F 2 -10.527 23.162 38.81 1 28.5 ? H11 GOL 201 B 1 HETATM 8 H H12 GOL . . . F 2 -10.87 23.419 37.326 1 28.5 ? H12 GOL 201 B 1 HETATM 9 H HO1 GOL . . . F 2 -12.69 22.05 37.829 1 32.02 ? HO1 GOL 201 B 1 HETATM 10 H H2 GOL . . . F 2 -10.48 20.834 38.478 1 25.04 ? H2 GOL 201 B 1 HETATM 11 H HO2 GOL . . . F 2 -10.871 20.322 36.27 1 27.99 ? HO2 GOL 201 B 1 HETATM 12 H H31 GOL . . . F 2 -8.593 22.176 37.796 1 25.85 ? H31 GOL 201 B 1 HETATM 13 H H32 GOL . . . F 2 -9.149 22.202 36.357 1 25.85 ? H32 GOL 201 B 1 HETATM 14 H HO3 GOL . . . F 2 -8.692 20.226 36.066 1 24.9 ? HO3 GOL 201 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #