data_9F96 # _model_server_result.job_id N6AebibVxORjmWLRiCxkxA _model_server_result.datetime_utc '2025-01-10 12:50:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 9F96 # _exptl.entry_id 9F96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9F96 _cell.length_a 76.781 _cell.length_b 76.781 _cell.length_c 101.379 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -76.781 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 107 n n C1 C2 EDO sing 108 n n C1 H11 EDO sing 109 n n C1 H12 EDO sing 110 n n O1 HO1 EDO sing 111 n n C2 O2 EDO sing 112 n n C2 H21 EDO sing 113 n n C2 H22 EDO sing 114 n n O2 HO2 EDO sing 115 n n # _atom_sites.entry_id 9F96 _atom_sites.fract_transf_matrix[1][1] 0.013024 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013024 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 302 EDO EDO . C 2 EDO A 1 302 304 EDO EDO . D 3 A1IAW A 1 303 306 A1IAW LIG . E 4 HOH A 1 401 108 HOH HOH . E 4 HOH A 2 402 98 HOH HOH . E 4 HOH A 3 403 213 HOH HOH . E 4 HOH A 4 404 47 HOH HOH . E 4 HOH A 5 405 178 HOH HOH . E 4 HOH A 6 406 134 HOH HOH . E 4 HOH A 7 407 77 HOH HOH . E 4 HOH A 8 408 123 HOH HOH . E 4 HOH A 9 409 131 HOH HOH . E 4 HOH A 10 410 26 HOH HOH . E 4 HOH A 11 411 91 HOH HOH . E 4 HOH A 12 412 38 HOH HOH . E 4 HOH A 13 413 20 HOH HOH . E 4 HOH A 14 414 5 HOH HOH . E 4 HOH A 15 415 187 HOH HOH . E 4 HOH A 16 416 82 HOH HOH . E 4 HOH A 17 417 128 HOH HOH . E 4 HOH A 18 418 34 HOH HOH . E 4 HOH A 19 419 299 HOH HOH . E 4 HOH A 20 420 18 HOH HOH . E 4 HOH A 21 421 115 HOH HOH . E 4 HOH A 22 422 58 HOH HOH . E 4 HOH A 23 423 72 HOH HOH . E 4 HOH A 24 424 209 HOH HOH . E 4 HOH A 25 425 54 HOH HOH . E 4 HOH A 26 426 109 HOH HOH . E 4 HOH A 27 427 35 HOH HOH . E 4 HOH A 28 428 117 HOH HOH . E 4 HOH A 29 429 161 HOH HOH . E 4 HOH A 30 430 306 HOH HOH . E 4 HOH A 31 431 1 HOH HOH . E 4 HOH A 32 432 90 HOH HOH . E 4 HOH A 33 433 102 HOH HOH . E 4 HOH A 34 434 217 HOH HOH . E 4 HOH A 35 435 130 HOH HOH . E 4 HOH A 36 436 111 HOH HOH . E 4 HOH A 37 437 96 HOH HOH . E 4 HOH A 38 438 75 HOH HOH . E 4 HOH A 39 439 301 HOH HOH . E 4 HOH A 40 440 81 HOH HOH . E 4 HOH A 41 441 24 HOH HOH . E 4 HOH A 42 442 173 HOH HOH . E 4 HOH A 43 443 119 HOH HOH . E 4 HOH A 44 444 3 HOH HOH . E 4 HOH A 45 445 17 HOH HOH . E 4 HOH A 46 446 89 HOH HOH . E 4 HOH A 47 447 211 HOH HOH . E 4 HOH A 48 448 141 HOH HOH . E 4 HOH A 49 449 146 HOH HOH . E 4 HOH A 50 450 184 HOH HOH . E 4 HOH A 51 451 110 HOH HOH . E 4 HOH A 52 452 50 HOH HOH . E 4 HOH A 53 453 45 HOH HOH . E 4 HOH A 54 454 12 HOH HOH . E 4 HOH A 55 455 180 HOH HOH . E 4 HOH A 56 456 10 HOH HOH . E 4 HOH A 57 457 43 HOH HOH . E 4 HOH A 58 458 9 HOH HOH . E 4 HOH A 59 459 170 HOH HOH . E 4 HOH A 60 460 238 HOH HOH . E 4 HOH A 61 461 303 HOH HOH . E 4 HOH A 62 462 151 HOH HOH . E 4 HOH A 63 463 116 HOH HOH . E 4 HOH A 64 464 30 HOH HOH . E 4 HOH A 65 465 14 HOH HOH . E 4 HOH A 66 466 16 HOH HOH . E 4 HOH A 67 467 32 HOH HOH . E 4 HOH A 68 468 7 HOH HOH . E 4 HOH A 69 469 304 HOH HOH . E 4 HOH A 70 470 145 HOH HOH . E 4 HOH A 71 471 313 HOH HOH . E 4 HOH A 72 472 27 HOH HOH . E 4 HOH A 73 473 51 HOH HOH . E 4 HOH A 74 474 80 HOH HOH . E 4 HOH A 75 475 121 HOH HOH . E 4 HOH A 76 476 19 HOH HOH . E 4 HOH A 77 477 76 HOH HOH . E 4 HOH A 78 478 23 HOH HOH . E 4 HOH A 79 479 144 HOH HOH . E 4 HOH A 80 480 2 HOH HOH . E 4 HOH A 81 481 104 HOH HOH . E 4 HOH A 82 482 221 HOH HOH . E 4 HOH A 83 483 112 HOH HOH . E 4 HOH A 84 484 254 HOH HOH . E 4 HOH A 85 485 61 HOH HOH . E 4 HOH A 86 486 55 HOH HOH . E 4 HOH A 87 487 65 HOH HOH . E 4 HOH A 88 488 107 HOH HOH . E 4 HOH A 89 489 87 HOH HOH . E 4 HOH A 90 490 49 HOH HOH . E 4 HOH A 91 491 136 HOH HOH . E 4 HOH A 92 492 106 HOH HOH . E 4 HOH A 93 493 129 HOH HOH . E 4 HOH A 94 494 31 HOH HOH . E 4 HOH A 95 495 8 HOH HOH . E 4 HOH A 96 496 162 HOH HOH . E 4 HOH A 97 497 171 HOH HOH . E 4 HOH A 98 498 285 HOH HOH . E 4 HOH A 99 499 147 HOH HOH . E 4 HOH A 100 500 185 HOH HOH . E 4 HOH A 101 501 241 HOH HOH . E 4 HOH A 102 502 69 HOH HOH . E 4 HOH A 103 503 59 HOH HOH . E 4 HOH A 104 504 52 HOH HOH . E 4 HOH A 105 505 150 HOH HOH . E 4 HOH A 106 506 85 HOH HOH . E 4 HOH A 107 507 68 HOH HOH . E 4 HOH A 108 508 33 HOH HOH . E 4 HOH A 109 509 11 HOH HOH . E 4 HOH A 110 510 13 HOH HOH . E 4 HOH A 111 511 71 HOH HOH . E 4 HOH A 112 512 181 HOH HOH . E 4 HOH A 113 513 124 HOH HOH . E 4 HOH A 114 514 126 HOH HOH . E 4 HOH A 115 515 56 HOH HOH . E 4 HOH A 116 516 42 HOH HOH . E 4 HOH A 117 517 41 HOH HOH . E 4 HOH A 118 518 6 HOH HOH . E 4 HOH A 119 519 149 HOH HOH . E 4 HOH A 120 520 315 HOH HOH . E 4 HOH A 121 521 139 HOH HOH . E 4 HOH A 122 522 156 HOH HOH . E 4 HOH A 123 523 28 HOH HOH . E 4 HOH A 124 524 25 HOH HOH . E 4 HOH A 125 525 166 HOH HOH . E 4 HOH A 126 526 152 HOH HOH . E 4 HOH A 127 527 120 HOH HOH . E 4 HOH A 128 528 135 HOH HOH . E 4 HOH A 129 529 86 HOH HOH . E 4 HOH A 130 530 236 HOH HOH . E 4 HOH A 131 531 103 HOH HOH . E 4 HOH A 132 532 195 HOH HOH . E 4 HOH A 133 533 48 HOH HOH . E 4 HOH A 134 534 265 HOH HOH . E 4 HOH A 135 535 295 HOH HOH . E 4 HOH A 136 536 57 HOH HOH . E 4 HOH A 137 537 239 HOH HOH . E 4 HOH A 138 538 44 HOH HOH . E 4 HOH A 139 539 95 HOH HOH . E 4 HOH A 140 540 78 HOH HOH . E 4 HOH A 141 541 53 HOH HOH . E 4 HOH A 142 542 84 HOH HOH . E 4 HOH A 143 543 101 HOH HOH . E 4 HOH A 144 544 105 HOH HOH . E 4 HOH A 145 545 118 HOH HOH . E 4 HOH A 146 546 143 HOH HOH . E 4 HOH A 147 547 37 HOH HOH . E 4 HOH A 148 548 67 HOH HOH . E 4 HOH A 149 549 138 HOH HOH . E 4 HOH A 150 550 163 HOH HOH . E 4 HOH A 151 551 46 HOH HOH . E 4 HOH A 152 552 189 HOH HOH . E 4 HOH A 153 553 73 HOH HOH . E 4 HOH A 154 554 36 HOH HOH . E 4 HOH A 155 555 308 HOH HOH . E 4 HOH A 156 556 29 HOH HOH . E 4 HOH A 157 557 92 HOH HOH . E 4 HOH A 158 558 60 HOH HOH . E 4 HOH A 159 559 97 HOH HOH . E 4 HOH A 160 560 273 HOH HOH . E 4 HOH A 161 561 74 HOH HOH . E 4 HOH A 162 562 172 HOH HOH . E 4 HOH A 163 563 40 HOH HOH . E 4 HOH A 164 564 142 HOH HOH . E 4 HOH A 165 565 70 HOH HOH . E 4 HOH A 166 566 79 HOH HOH . E 4 HOH A 167 567 127 HOH HOH . E 4 HOH A 168 568 317 HOH HOH . E 4 HOH A 169 569 202 HOH HOH . E 4 HOH A 170 570 193 HOH HOH . E 4 HOH A 171 571 100 HOH HOH . E 4 HOH A 172 572 62 HOH HOH . E 4 HOH A 173 573 310 HOH HOH . E 4 HOH A 174 574 169 HOH HOH . E 4 HOH A 175 575 288 HOH HOH . E 4 HOH A 176 576 200 HOH HOH . E 4 HOH A 177 577 66 HOH HOH . E 4 HOH A 178 578 154 HOH HOH . E 4 HOH A 179 579 311 HOH HOH . E 4 HOH A 180 580 125 HOH HOH . E 4 HOH A 181 581 157 HOH HOH . E 4 HOH A 182 582 167 HOH HOH . E 4 HOH A 183 583 210 HOH HOH . E 4 HOH A 184 584 318 HOH HOH . E 4 HOH A 185 585 294 HOH HOH . E 4 HOH A 186 586 21 HOH HOH . E 4 HOH A 187 587 271 HOH HOH . E 4 HOH A 188 588 264 HOH HOH . E 4 HOH A 189 589 244 HOH HOH . E 4 HOH A 190 590 280 HOH HOH . E 4 HOH A 191 591 300 HOH HOH . E 4 HOH A 192 592 270 HOH HOH . E 4 HOH A 193 593 286 HOH HOH . E 4 HOH A 194 594 168 HOH HOH . E 4 HOH A 195 595 250 HOH HOH . E 4 HOH A 196 596 94 HOH HOH . E 4 HOH A 197 597 307 HOH HOH . E 4 HOH A 198 598 203 HOH HOH . E 4 HOH A 199 599 251 HOH HOH . E 4 HOH A 200 600 225 HOH HOH . E 4 HOH A 201 601 246 HOH HOH . E 4 HOH A 202 602 165 HOH HOH . E 4 HOH A 203 603 208 HOH HOH . E 4 HOH A 204 604 114 HOH HOH . E 4 HOH A 205 605 267 HOH HOH . E 4 HOH A 206 606 158 HOH HOH . E 4 HOH A 207 607 212 HOH HOH . E 4 HOH A 208 608 88 HOH HOH . E 4 HOH A 209 609 122 HOH HOH . E 4 HOH A 210 610 188 HOH HOH . E 4 HOH A 211 611 113 HOH HOH . E 4 HOH A 212 612 201 HOH HOH . E 4 HOH A 213 613 183 HOH HOH . E 4 HOH A 214 614 132 HOH HOH . E 4 HOH A 215 615 316 HOH HOH . E 4 HOH A 216 616 253 HOH HOH . E 4 HOH A 217 617 64 HOH HOH . E 4 HOH A 218 618 268 HOH HOH . E 4 HOH A 219 619 137 HOH HOH . E 4 HOH A 220 620 215 HOH HOH . E 4 HOH A 221 621 174 HOH HOH . E 4 HOH A 222 622 190 HOH HOH . E 4 HOH A 223 623 283 HOH HOH . E 4 HOH A 224 624 133 HOH HOH . E 4 HOH A 225 625 153 HOH HOH . E 4 HOH A 226 626 192 HOH HOH . E 4 HOH A 227 627 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 8.441 -31.821 2.799 1 34.42 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . C 2 9.806 -32.043 3.175 1 33.92 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . C 2 8.353 -31.139 1.44 1 33.92 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . C 2 8.853 -29.797 1.494 1 33.33 ? O2 EDO 302 A 1 HETATM 5 H H11 EDO . . . C 2 7.914 -32.777 2.761 1 41.3 ? H11 EDO 302 A 1 HETATM 6 H H12 EDO . . . C 2 7.953 -31.198 3.552 1 41.3 ? H12 EDO 302 A 1 HETATM 7 H HO1 EDO . . . C 2 9.836 -32.499 4.027 1 40.71 ? HO1 EDO 302 A 1 HETATM 8 H H21 EDO . . . C 2 7.313 -31.125 1.109 1 40.7 ? H21 EDO 302 A 1 HETATM 9 H H22 EDO . . . C 2 8.93 -31.711 0.71 1 40.7 ? H22 EDO 302 A 1 HETATM 10 H HO2 EDO . . . C 2 8.8 -29.397 0.615 1 40 ? HO2 EDO 302 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #