data_9F9F # _model_server_result.job_id XsztIzC5NPER2tO0o0kjqQ _model_server_result.datetime_utc '2025-01-22 15:46:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f9f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":309}' # _entry.id 9F9F # _exptl.entry_id 9F9F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9F9F _cell.length_a 62.95 _cell.length_b 62.95 _cell.length_c 111.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F9F _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 213 A LYS 216 1_555 Q C15 RET . A RET 316 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A NZ LYS 213 A LYS 216 1_555 Q C15 RET . A RET 316 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 333 n n C10 C9 OLC doub 334 n n C10 C11 OLC sing 335 n n C9 C8 OLC sing 336 n n C17 C16 OLC sing 337 z n C11 C12 OLC sing 338 n n C8 C7 OLC sing 339 n n C24 C22 OLC sing 340 n n C24 O25 OLC sing 341 n n C16 C15 OLC sing 342 n n C12 C13 OLC sing 343 n n C7 C6 OLC sing 344 n n C15 C14 OLC sing 345 n n C13 C14 OLC sing 346 n n C6 C5 OLC sing 347 n n C5 C4 OLC sing 348 n n C4 C3 OLC sing 349 n n C3 C2 OLC sing 350 n n C2 C1 OLC sing 351 n n C21 C22 OLC sing 352 n n C21 O20 OLC sing 353 n n C1 O19 OLC doub 354 n n C1 O20 OLC sing 355 n n C22 O23 OLC sing 356 n n C18 H18 OLC sing 357 n n C18 H18A OLC sing 358 n n C18 H18B OLC sing 359 n n C10 H10 OLC sing 360 n n C9 H9 OLC sing 361 n n C17 H17 OLC sing 362 n n C17 H17A OLC sing 363 n n C11 H11 OLC sing 364 n n C11 H11A OLC sing 365 n n C8 H8 OLC sing 366 n n C8 H8A OLC sing 367 n n C24 H24 OLC sing 368 n n C24 H24A OLC sing 369 n n C16 H16 OLC sing 370 n n C16 H16A OLC sing 371 n n C12 H12 OLC sing 372 n n C12 H12A OLC sing 373 n n C7 H7 OLC sing 374 n n C7 H7A OLC sing 375 n n C15 H15 OLC sing 376 n n C15 H15A OLC sing 377 n n C13 H13 OLC sing 378 n n C13 H13A OLC sing 379 n n C6 H6 OLC sing 380 n n C6 H6A OLC sing 381 n n C14 H14 OLC sing 382 n n C14 H14A OLC sing 383 n n C5 H5 OLC sing 384 n n C5 H5A OLC sing 385 n n C4 H4 OLC sing 386 n n C4 H4A OLC sing 387 n n C3 H3 OLC sing 388 n n C3 H3A OLC sing 389 n n C2 H2 OLC sing 390 n n C2 H2A OLC sing 391 n n C21 H21 OLC sing 392 n n C21 H21A OLC sing 393 n n C22 H22 OLC sing 394 n n O25 HO25 OLC sing 395 n n O23 HO23 OLC sing 396 n n # _atom_sites.entry_id 9F9F _atom_sites.fract_transf_matrix[1][1] 0.015886 _atom_sites.fract_transf_matrix[1][2] 0.009172 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LI1 A 1 301 302 LI1 LI1 . C 2 LI1 A 1 302 303 LI1 LI1 . D 2 LI1 A 1 303 305 LI1 LI1 . E 2 LI1 A 1 304 306 LI1 LI1 . F 2 LI1 A 1 305 307 LI1 LI1 . G 2 LI1 A 1 306 308 LI1 LI1 . H 3 OLC A 1 307 309 OLC OLC . I 3 OLC A 1 308 310 OLC OLC . J 3 OLC A 1 309 311 OLC OLC . K 3 OLC A 1 310 312 OLC OLC . L 2 LI1 A 1 311 313 LI1 LI1 . M 2 LI1 A 1 312 314 LI1 LI1 . N 2 LI1 A 1 313 315 LI1 LI1 . O 2 LI1 A 1 314 316 LI1 LI1 . P 2 LI1 A 1 315 317 LI1 LI1 . Q 4 RET A 1 316 216 RET LYR . R 5 HOH A 1 401 30 HOH HOH . R 5 HOH A 2 402 39 HOH HOH . R 5 HOH A 3 403 83 HOH HOH . R 5 HOH A 4 404 29 HOH HOH . R 5 HOH A 5 405 1 HOH HOH . R 5 HOH A 6 406 80 HOH HOH . R 5 HOH A 7 407 3 HOH HOH . R 5 HOH A 8 408 73 HOH HOH . R 5 HOH A 9 409 74 HOH HOH . R 5 HOH A 10 410 4 HOH HOH . R 5 HOH A 11 411 24 HOH HOH . R 5 HOH A 12 412 77 HOH HOH . R 5 HOH A 13 413 55 HOH HOH . R 5 HOH A 14 414 9 HOH HOH . R 5 HOH A 15 415 8 HOH HOH . R 5 HOH A 16 416 11 HOH HOH . R 5 HOH A 17 417 5 HOH HOH . R 5 HOH A 18 418 75 HOH HOH . R 5 HOH A 19 419 6 HOH HOH . R 5 HOH A 20 420 48 HOH HOH . R 5 HOH A 21 421 16 HOH HOH . R 5 HOH A 22 422 84 HOH HOH . R 5 HOH A 23 423 28 HOH HOH . R 5 HOH A 24 424 10 HOH HOH . R 5 HOH A 25 425 2 HOH HOH . R 5 HOH A 26 426 19 HOH HOH . R 5 HOH A 27 427 54 HOH HOH . R 5 HOH A 28 428 13 HOH HOH . R 5 HOH A 29 429 78 HOH HOH . R 5 HOH A 30 430 7 HOH HOH . R 5 HOH A 31 431 14 HOH HOH . R 5 HOH A 32 432 12 HOH HOH . R 5 HOH A 33 433 15 HOH HOH . R 5 HOH A 34 434 17 HOH HOH . R 5 HOH A 35 435 81 HOH HOH . R 5 HOH A 36 436 79 HOH HOH . R 5 HOH A 37 437 20 HOH HOH . R 5 HOH A 38 438 34 HOH HOH . R 5 HOH A 39 439 22 HOH HOH . R 5 HOH A 40 440 26 HOH HOH . R 5 HOH A 41 441 51 HOH HOH . R 5 HOH A 42 442 65 HOH HOH . R 5 HOH A 43 443 50 HOH HOH . R 5 HOH A 44 444 64 HOH HOH . R 5 HOH A 45 445 82 HOH HOH . R 5 HOH A 46 446 43 HOH HOH . R 5 HOH A 47 447 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . J 3 22.134 54.55 36.306 1 50.86 ? C18 OLC 309 A 1 HETATM 2 C C10 OLC . . . J 3 22.937 56.267 27.631 1 72.58 ? C10 OLC 309 A 1 HETATM 3 C C9 OLC . . . J 3 23.297 56.779 26.44 1 77.6 ? C9 OLC 309 A 1 HETATM 4 C C17 OLC . . . J 3 21.788 53.761 35.026 1 58.74 ? C17 OLC 309 A 1 HETATM 5 C C11 OLC . . . J 3 22.821 56.966 29.012 1 60.82 ? C11 OLC 309 A 1 HETATM 6 C C8 OLC . . . J 3 23.789 57.886 25.463 1 92.32 ? C8 OLC 309 A 1 HETATM 7 C C24 OLC . . . J 3 29.387 55.816 20.865 1 79 ? C24 OLC 309 A 1 HETATM 8 C C16 OLC . . . J 3 21.801 54.708 33.804 1 63.34 ? C16 OLC 309 A 1 HETATM 9 C C12 OLC . . . J 3 21.532 56.441 29.708 1 67.56 ? C12 OLC 309 A 1 HETATM 10 C C7 OLC . . . J 3 24.813 57.247 24.486 1 73.53 ? C7 OLC 309 A 1 HETATM 11 C C15 OLC . . . J 3 20.937 54.109 32.667 1 56.63 ? C15 OLC 309 A 1 HETATM 12 C C13 OLC . . . J 3 21.83 55.936 31.147 1 66.56 ? C13 OLC 309 A 1 HETATM 13 C C6 OLC . . . J 3 24.752 57.841 23.046 1 79.03 ? C6 OLC 309 A 1 HETATM 14 C C14 OLC . . . J 3 20.544 55.259 31.704 1 60.77 ? C14 OLC 309 A 1 HETATM 15 C C5 OLC . . . J 3 23.378 57.635 22.34 1 73.02 ? C5 OLC 309 A 1 HETATM 16 C C4 OLC . . . J 3 23.493 58.236 20.907 1 79.4 ? C4 OLC 309 A 1 HETATM 17 C C3 OLC . . . J 3 23.764 57.079 19.906 1 78.69 ? C3 OLC 309 A 1 HETATM 18 C C2 OLC . . . J 3 24.251 57.641 18.545 1 67.35 ? C2 OLC 309 A 1 HETATM 19 C C21 OLC . . . J 3 27.214 56.175 19.634 1 100.73 ? C21 OLC 309 A 1 HETATM 20 C C1 OLC . . . J 3 25.791 57.771 18.606 1 94.48 ? C1 OLC 309 A 1 HETATM 21 C C22 OLC . . . J 3 28.74 56.35 19.582 1 94.83 ? C22 OLC 309 A 1 HETATM 22 O O19 OLC . . . J 3 26.271 58.835 18.824 1 100.31 ? O19 OLC 309 A 1 HETATM 23 O O25 OLC . . . J 3 28.957 56.598 21.957 1 74.63 ? O25 OLC 309 A 1 HETATM 24 O O23 OLC . . . J 3 29.267 55.681 18.475 1 103.35 ? O23 OLC 309 A 1 HETATM 25 O O20 OLC . . . J 3 26.648 56.657 18.425 1 116.5 ? O20 OLC 309 A 1 HETATM 26 H H18 OLC . . . J 3 23.092 55.049 36.176 0 61.03 ? H18 OLC 309 A 1 HETATM 27 H H18A OLC . . . J 3 21.361 55.292 36.495 0 61.03 ? H18A OLC 309 A 1 HETATM 28 H H18B OLC . . . J 3 22.194 53.865 37.15 0 61.03 ? H18B OLC 309 A 1 HETATM 29 H H10 OLC . . . J 3 21.854 56.185 27.674 0 87.09 ? H10 OLC 309 A 1 HETATM 30 H H9 OLC . . . J 3 23.122 57.771 26.848 0 93.13 ? H9 OLC 309 A 1 HETATM 31 H H17 OLC . . . J 3 20.798 53.32 35.131 0 70.49 ? H17 OLC 309 A 1 HETATM 32 H H17A OLC . . . J 3 22.524 52.971 34.879 0 70.49 ? H17A OLC 309 A 1 HETATM 33 H H11 OLC . . . J 3 22.755 58.047 28.875 0 72.98 ? H11 OLC 309 A 1 HETATM 34 H H11A OLC . . . J 3 23.694 56.73 29.621 0 72.98 ? H11A OLC 309 A 1 HETATM 35 H H8 OLC . . . J 3 24.265 58.69 26.024 0 110.79 ? H8 OLC 309 A 1 HETATM 36 H H8A OLC . . . J 3 22.944 58.286 24.902 0 110.79 ? H8A OLC 309 A 1 HETATM 37 H H24 OLC . . . J 3 30.471 55.874 20.779 0 94.8 ? H24 OLC 309 A 1 HETATM 38 H H24A OLC . . . J 3 29.09 54.779 21.019 0 94.8 ? H24A OLC 309 A 1 HETATM 39 H H16 OLC . . . J 3 21.397 55.678 34.094 0 76 ? H16 OLC 309 A 1 HETATM 40 H H16A OLC . . . J 3 22.826 54.831 33.453 0 76 ? H16A OLC 309 A 1 HETATM 41 H H12 OLC . . . J 3 20.803 57.248 29.76 0 81.08 ? H12 OLC 309 A 1 HETATM 42 H H12A OLC . . . J 3 21.122 55.62 29.122 0 81.08 ? H12A OLC 309 A 1 HETATM 43 H H7 OLC . . . J 3 25.815 57.407 24.884 0 88.23 ? H7 OLC 309 A 1 HETATM 44 H H7A OLC . . . J 3 24.612 56.177 24.427 0 88.23 ? H7A OLC 309 A 1 HETATM 45 H H15 OLC . . . J 3 20.039 53.655 33.085 0 67.95 ? H15 OLC 309 A 1 HETATM 46 H H15A OLC . . . J 3 21.507 53.354 32.128 0 67.95 ? H15A OLC 309 A 1 HETATM 47 H H13 OLC . . . J 3 22.109 56.775 31.782 0 79.87 ? H13 OLC 309 A 1 HETATM 48 H H13A OLC . . . J 3 22.645 55.213 31.122 0 79.87 ? H13A OLC 309 A 1 HETATM 49 H H6 OLC . . . J 3 24.952 58.911 23.106 0 94.84 ? H6 OLC 309 A 1 HETATM 50 H H6A OLC . . . J 3 25.524 57.361 22.443 0 94.84 ? H6A OLC 309 A 1 HETATM 51 H H14 OLC . . . J 3 19.95 55.997 32.243 0 72.92 ? H14 OLC 309 A 1 HETATM 52 H H14A OLC . . . J 3 19.959 54.856 30.877 0 72.92 ? H14A OLC 309 A 1 HETATM 53 H H5 OLC . . . J 3 22.593 58.148 22.896 0 87.63 ? H5 OLC 309 A 1 HETATM 54 H H5A OLC . . . J 3 23.145 56.572 22.28 0 87.63 ? H5A OLC 309 A 1 HETATM 55 H H4 OLC . . . J 3 22.563 58.739 20.644 0 95.28 ? H4 OLC 309 A 1 HETATM 56 H H4A OLC . . . J 3 24.315 58.951 20.874 0 95.28 ? H4A OLC 309 A 1 HETATM 57 H H3 OLC . . . J 3 24.53 56.421 20.317 0 94.43 ? H3 OLC 309 A 1 HETATM 58 H H3A OLC . . . J 3 22.845 56.514 19.753 0 94.43 ? H3A OLC 309 A 1 HETATM 59 H H2 OLC . . . J 3 23.969 56.962 17.742 0 80.82 ? H2 OLC 309 A 1 HETATM 60 H H2A OLC . . . J 3 23.805 58.618 18.367 0 80.82 ? H2A OLC 309 A 1 HETATM 61 H H21 OLC . . . J 3 26.973 55.119 19.755 0 120.88 ? H21 OLC 309 A 1 HETATM 62 H H21A OLC . . . J 3 26.811 56.739 20.476 0 120.88 ? H21A OLC 309 A 1 HETATM 63 H H22 OLC . . . J 3 28.959 57.414 19.494 0 113.8 ? H22 OLC 309 A 1 HETATM 64 H HO25 OLC . . . J 3 28.606 56.031 22.63 0 89.56 ? HO25 OLC 309 A 1 HETATM 65 H HO23 OLC . . . J 3 29.767 56.294 17.949 0 124.02 ? HO23 OLC 309 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 65 #