data_9F9F # _model_server_result.job_id BCi0CAO-7FcUCXiNRCt1jw _model_server_result.datetime_utc '2025-01-22 15:52:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9f9f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":310}' # _entry.id 9F9F # _exptl.entry_id 9F9F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9F9F _cell.length_a 62.95 _cell.length_b 62.95 _cell.length_c 111.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9F9F _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 213 A LYS 216 1_555 Q C15 RET . A RET 316 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A NZ LYS 213 A LYS 216 1_555 Q C15 RET . A RET 316 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 333 n n C10 C9 OLC doub 334 n n C10 C11 OLC sing 335 n n C9 C8 OLC sing 336 n n C17 C16 OLC sing 337 z n C11 C12 OLC sing 338 n n C8 C7 OLC sing 339 n n C24 C22 OLC sing 340 n n C24 O25 OLC sing 341 n n C16 C15 OLC sing 342 n n C12 C13 OLC sing 343 n n C7 C6 OLC sing 344 n n C15 C14 OLC sing 345 n n C13 C14 OLC sing 346 n n C6 C5 OLC sing 347 n n C5 C4 OLC sing 348 n n C4 C3 OLC sing 349 n n C3 C2 OLC sing 350 n n C2 C1 OLC sing 351 n n C21 C22 OLC sing 352 n n C21 O20 OLC sing 353 n n C1 O19 OLC doub 354 n n C1 O20 OLC sing 355 n n C22 O23 OLC sing 356 n n C18 H18 OLC sing 357 n n C18 H18A OLC sing 358 n n C18 H18B OLC sing 359 n n C10 H10 OLC sing 360 n n C9 H9 OLC sing 361 n n C17 H17 OLC sing 362 n n C17 H17A OLC sing 363 n n C11 H11 OLC sing 364 n n C11 H11A OLC sing 365 n n C8 H8 OLC sing 366 n n C8 H8A OLC sing 367 n n C24 H24 OLC sing 368 n n C24 H24A OLC sing 369 n n C16 H16 OLC sing 370 n n C16 H16A OLC sing 371 n n C12 H12 OLC sing 372 n n C12 H12A OLC sing 373 n n C7 H7 OLC sing 374 n n C7 H7A OLC sing 375 n n C15 H15 OLC sing 376 n n C15 H15A OLC sing 377 n n C13 H13 OLC sing 378 n n C13 H13A OLC sing 379 n n C6 H6 OLC sing 380 n n C6 H6A OLC sing 381 n n C14 H14 OLC sing 382 n n C14 H14A OLC sing 383 n n C5 H5 OLC sing 384 n n C5 H5A OLC sing 385 n n C4 H4 OLC sing 386 n n C4 H4A OLC sing 387 n n C3 H3 OLC sing 388 n n C3 H3A OLC sing 389 n n C2 H2 OLC sing 390 n n C2 H2A OLC sing 391 n n C21 H21 OLC sing 392 n n C21 H21A OLC sing 393 n n C22 H22 OLC sing 394 n n O25 HO25 OLC sing 395 n n O23 HO23 OLC sing 396 n n # _atom_sites.entry_id 9F9F _atom_sites.fract_transf_matrix[1][1] 0.015886 _atom_sites.fract_transf_matrix[1][2] 0.009172 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LI1 A 1 301 302 LI1 LI1 . C 2 LI1 A 1 302 303 LI1 LI1 . D 2 LI1 A 1 303 305 LI1 LI1 . E 2 LI1 A 1 304 306 LI1 LI1 . F 2 LI1 A 1 305 307 LI1 LI1 . G 2 LI1 A 1 306 308 LI1 LI1 . H 3 OLC A 1 307 309 OLC OLC . I 3 OLC A 1 308 310 OLC OLC . J 3 OLC A 1 309 311 OLC OLC . K 3 OLC A 1 310 312 OLC OLC . L 2 LI1 A 1 311 313 LI1 LI1 . M 2 LI1 A 1 312 314 LI1 LI1 . N 2 LI1 A 1 313 315 LI1 LI1 . O 2 LI1 A 1 314 316 LI1 LI1 . P 2 LI1 A 1 315 317 LI1 LI1 . Q 4 RET A 1 316 216 RET LYR . R 5 HOH A 1 401 30 HOH HOH . R 5 HOH A 2 402 39 HOH HOH . R 5 HOH A 3 403 83 HOH HOH . R 5 HOH A 4 404 29 HOH HOH . R 5 HOH A 5 405 1 HOH HOH . R 5 HOH A 6 406 80 HOH HOH . R 5 HOH A 7 407 3 HOH HOH . R 5 HOH A 8 408 73 HOH HOH . R 5 HOH A 9 409 74 HOH HOH . R 5 HOH A 10 410 4 HOH HOH . R 5 HOH A 11 411 24 HOH HOH . R 5 HOH A 12 412 77 HOH HOH . R 5 HOH A 13 413 55 HOH HOH . R 5 HOH A 14 414 9 HOH HOH . R 5 HOH A 15 415 8 HOH HOH . R 5 HOH A 16 416 11 HOH HOH . R 5 HOH A 17 417 5 HOH HOH . R 5 HOH A 18 418 75 HOH HOH . R 5 HOH A 19 419 6 HOH HOH . R 5 HOH A 20 420 48 HOH HOH . R 5 HOH A 21 421 16 HOH HOH . R 5 HOH A 22 422 84 HOH HOH . R 5 HOH A 23 423 28 HOH HOH . R 5 HOH A 24 424 10 HOH HOH . R 5 HOH A 25 425 2 HOH HOH . R 5 HOH A 26 426 19 HOH HOH . R 5 HOH A 27 427 54 HOH HOH . R 5 HOH A 28 428 13 HOH HOH . R 5 HOH A 29 429 78 HOH HOH . R 5 HOH A 30 430 7 HOH HOH . R 5 HOH A 31 431 14 HOH HOH . R 5 HOH A 32 432 12 HOH HOH . R 5 HOH A 33 433 15 HOH HOH . R 5 HOH A 34 434 17 HOH HOH . R 5 HOH A 35 435 81 HOH HOH . R 5 HOH A 36 436 79 HOH HOH . R 5 HOH A 37 437 20 HOH HOH . R 5 HOH A 38 438 34 HOH HOH . R 5 HOH A 39 439 22 HOH HOH . R 5 HOH A 40 440 26 HOH HOH . R 5 HOH A 41 441 51 HOH HOH . R 5 HOH A 42 442 65 HOH HOH . R 5 HOH A 43 443 50 HOH HOH . R 5 HOH A 44 444 64 HOH HOH . R 5 HOH A 45 445 82 HOH HOH . R 5 HOH A 46 446 43 HOH HOH . R 5 HOH A 47 447 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . K 3 34.536 35.074 36.216 1 71.94 ? C18 OLC 310 A 1 HETATM 2 C C10 OLC . . . K 3 33.743 40.085 28.494 1 67.49 ? C10 OLC 310 A 1 HETATM 3 C C9 OLC . . . K 3 33.16 40.999 27.719 1 59.81 ? C9 OLC 310 A 1 HETATM 4 C C17 OLC . . . K 3 35.763 34.986 35.282 1 87.37 ? C17 OLC 310 A 1 HETATM 5 C C11 OLC . . . K 3 33.535 39.735 29.983 1 81.14 ? C11 OLC 310 A 1 HETATM 6 C C8 OLC . . . K 3 33.006 41.7 26.328 1 73.24 ? C8 OLC 310 A 1 HETATM 7 C C24 OLC . . . K 3 35.7 45.574 14.113 1 99.12 ? C24 OLC 310 A 1 HETATM 8 C C16 OLC . . . K 3 35.316 35.261 33.826 1 99.84 ? C16 OLC 310 A 1 HETATM 9 C C12 OLC . . . K 3 34.742 38.824 30.345 1 79.05 ? C12 OLC 310 A 1 HETATM 10 C C7 OLC . . . K 3 34.039 41.22 25.256 1 53.97 ? C7 OLC 310 A 1 HETATM 11 C C15 OLC . . . K 3 35.759 36.676 33.371 1 76.11 ? C15 OLC 310 A 1 HETATM 12 C C13 OLC . . . K 3 34.807 38.511 31.863 1 96.87 ? C13 OLC 310 A 1 HETATM 13 C C6 OLC . . . K 3 33.94 42.171 24.037 1 59.83 ? C6 OLC 310 A 1 HETATM 14 C C14 OLC . . . K 3 35.07 36.986 32.017 1 96.36 ? C14 OLC 310 A 1 HETATM 15 C C5 OLC . . . K 3 34.736 41.594 22.835 1 51.28 ? C5 OLC 310 A 1 HETATM 16 C C4 OLC . . . K 3 34.535 42.58 21.652 1 66.14 ? C4 OLC 310 A 1 HETATM 17 C C3 OLC . . . K 3 34.956 41.951 20.296 1 54.64 ? C3 OLC 310 A 1 HETATM 18 C C2 OLC . . . K 3 34.295 42.8 19.176 1 90.68 ? C2 OLC 310 A 1 HETATM 19 C C21 OLC . . . K 3 35.786 43.758 15.817 1 89.37 ? C21 OLC 310 A 1 HETATM 20 C C1 OLC . . . K 3 35.318 43.133 18.068 1 85.66 ? C1 OLC 310 A 1 HETATM 21 C C22 OLC . . . K 3 34.981 44.327 14.642 1 110.3 ? C22 OLC 310 A 1 HETATM 22 O O19 OLC . . . K 3 36.413 43.473 18.374 1 79.14 ? O19 OLC 310 A 1 HETATM 23 O O25 OLC . . . K 3 35.497 46.649 15.005 1 77.89 ? O25 OLC 310 A 1 HETATM 24 O O23 OLC . . . K 3 34.882 43.372 13.628 1 112.79 ? O23 OLC 310 A 1 HETATM 25 O O20 OLC . . . K 3 34.936 43.056 16.706 1 107.93 ? O20 OLC 310 A 1 HETATM 26 H H18 OLC . . . K 3 34.832 34.811 37.229 0 86.33 ? H18 OLC 310 A 1 HETATM 27 H H18A OLC . . . K 3 34.144 36.089 36.204 0 86.33 ? H18A OLC 310 A 1 HETATM 28 H H18B OLC . . . K 3 33.768 34.385 35.872 0 86.33 ? H18B OLC 310 A 1 HETATM 29 H H10 OLC . . . K 3 33.291 39.116 28.3 0 80.98 ? H10 OLC 310 A 1 HETATM 30 H H9 OLC . . . K 3 33.581 40.409 26.909 0 71.77 ? H9 OLC 310 A 1 HETATM 31 H H17 OLC . . . K 3 36.503 35.726 35.582 0 104.84 ? H17 OLC 310 A 1 HETATM 32 H H17A OLC . . . K 3 36.199 33.99 35.347 0 104.84 ? H17A OLC 310 A 1 HETATM 33 H H11 OLC . . . K 3 33.536 40.638 30.595 0 97.37 ? H11 OLC 310 A 1 HETATM 34 H H11A OLC . . . K 3 32.594 39.202 30.125 0 97.37 ? H11A OLC 310 A 1 HETATM 35 H H8 OLC . . . K 3 33.132 42.773 26.469 0 87.89 ? H8 OLC 310 A 1 HETATM 36 H H8A OLC . . . K 3 32.003 41.498 25.952 0 87.89 ? H8A OLC 310 A 1 HETATM 37 H H24 OLC . . . K 3 35.3 45.835 13.134 0 118.94 ? H24 OLC 310 A 1 HETATM 38 H H24A OLC . . . K 3 36.766 45.37 14.027 0 118.94 ? H24A OLC 310 A 1 HETATM 39 H H16 OLC . . . K 3 35.765 34.517 33.167 0 119.8 ? H16 OLC 310 A 1 HETATM 40 H H16A OLC . . . K 3 34.23 35.19 33.766 0 119.8 ? H16A OLC 310 A 1 HETATM 41 H H12 OLC . . . K 3 34.651 37.887 29.798 0 94.86 ? H12 OLC 310 A 1 HETATM 42 H H12A OLC . . . K 3 35.662 39.328 30.052 0 94.86 ? H12A OLC 310 A 1 HETATM 43 H H7 OLC . . . K 3 35.046 41.255 25.672 0 64.77 ? H7 OLC 310 A 1 HETATM 44 H H7A OLC . . . K 3 33.807 40.2 24.95 0 64.77 ? H7A OLC 310 A 1 HETATM 45 H H15 OLC . . . K 3 36.841 36.703 33.249 0 91.33 ? H15 OLC 310 A 1 HETATM 46 H H15A OLC . . . K 3 35.459 37.413 34.115 0 91.33 ? H15A OLC 310 A 1 HETATM 47 H H13 OLC . . . K 3 33.862 38.775 32.337 0 116.25 ? H13 OLC 310 A 1 HETATM 48 H H13A OLC . . . K 3 35.615 39.076 32.325 0 116.25 ? H13A OLC 310 A 1 HETATM 49 H H6 OLC . . . K 3 32.893 42.285 23.754 0 71.79 ? H6 OLC 310 A 1 HETATM 50 H H6A OLC . . . K 3 34.351 43.144 24.306 0 71.79 ? H6A OLC 310 A 1 HETATM 51 H H14 OLC . . . K 3 34.12 36.454 31.97 0 115.64 ? H14 OLC 310 A 1 HETATM 52 H H14A OLC . . . K 3 35.715 36.652 31.204 0 115.64 ? H14A OLC 310 A 1 HETATM 53 H H5 OLC . . . K 3 34.354 40.607 22.57 0 61.54 ? H5 OLC 310 A 1 HETATM 54 H H5A OLC . . . K 3 35.794 41.518 23.086 0 61.54 ? H5A OLC 310 A 1 HETATM 55 H H4 OLC . . . K 3 33.483 42.858 21.6 0 79.36 ? H4 OLC 310 A 1 HETATM 56 H H4A OLC . . . K 3 35.138 43.47 21.83 0 79.36 ? H4A OLC 310 A 1 HETATM 57 H H3 OLC . . . K 3 36.04 41.976 20.192 0 65.57 ? H3 OLC 310 A 1 HETATM 58 H H3A OLC . . . K 3 34.608 40.92 20.237 0 65.57 ? H3A OLC 310 A 1 HETATM 59 H H2 OLC . . . K 3 33.469 42.239 18.743 0 108.81 ? H2 OLC 310 A 1 HETATM 60 H H2A OLC . . . K 3 33.919 43.727 19.605 0 108.81 ? H2A OLC 310 A 1 HETATM 61 H H21 OLC . . . K 3 36.547 43.077 15.434 0 107.24 ? H21 OLC 310 A 1 HETATM 62 H H21A OLC . . . K 3 36.268 44.577 16.352 0 107.24 ? H21A OLC 310 A 1 HETATM 63 H H22 OLC . . . K 3 33.977 44.59 14.975 0 132.36 ? H22 OLC 310 A 1 HETATM 64 H HO25 OLC . . . K 3 34.616 46.978 14.91 0 93.46 ? HO25 OLC 310 A 1 HETATM 65 H HO23 OLC . . . K 3 34.173 43.607 13.044 0 135.34 ? HO23 OLC 310 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 65 #