data_9FCJ
#
_model_server_result.job_id            XtR6ShCVbMmf9MCVn1Gfsg 
_model_server_result.datetime_utc      '2024-10-18 05:22:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9fcj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1001}' 
#
_entry.id    9FCJ 
#
_exptl.entry_id    9FCJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              384.477 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9FCJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9FCJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B SG CYS 441 D CYS 440 1_555 C ZN ZN . D ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc2 B SG CYS 444 D CYS 443 1_555 C ZN ZN . D ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc3 B SG CYS 507 D CYS 506 1_555 C ZN ZN . D ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc4 B SG CYS 510 D CYS 509 1_555 C ZN ZN . D ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
#
_chem_comp.formula           'C23 H24 N6' 
_chem_comp.formula_weight    384.477 
_chem_comp.id                JDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N4 C13 JDA sing 173 n y 
N4 N5 JDA doub 174 n y 
C13 C12 JDA doub 175 n y 
N5 N3 JDA sing 176 n y 
C12 N3 JDA sing 177 n y 
N3 C9 JDA sing 178 n n 
C9 C8 JDA doub 179 n y 
C9 C10 JDA sing 180 n y 
C8 C7 JDA sing 181 n y 
C10 C11 JDA doub 182 n y 
C7 C6 JDA doub 183 n y 
C16 C17 JDA doub 184 n y 
C16 C15 JDA sing 185 n y 
C17 C18 JDA sing 186 n y 
C11 C6 JDA sing 187 n y 
C6 C5 JDA sing 188 n n 
C15 C14 JDA doub 189 n y 
C5 N2 JDA sing 190 n n 
C18 C19 JDA doub 191 n y 
C14 C19 JDA sing 192 n y 
C14 C3 JDA sing 193 n n 
N1 C3 JDA doub 194 n y 
N1 C4 JDA sing 195 n y 
C19 C20 JDA sing 196 n n 
N2 C4 JDA sing 197 n n 
C3 N JDA sing 198 n y 
C4 C1 JDA doub 199 n y 
C20 C21 JDA sing 200 n n 
C20 C22 JDA sing 201 n n 
N C2 JDA doub 202 n y 
C1 C2 JDA sing 203 n y 
C1 C JDA sing 204 n n 
C H1 JDA sing 205 n n 
C H2 JDA sing 206 n n 
C H3 JDA sing 207 n n 
C10 H4 JDA sing 208 n n 
C11 H5 JDA sing 209 n n 
C12 H6 JDA sing 210 n n 
C13 H7 JDA sing 211 n n 
C15 H8 JDA sing 212 n n 
C16 H9 JDA sing 213 n n 
C17 H10 JDA sing 214 n n 
C18 H11 JDA sing 215 n n 
C2 H12 JDA sing 216 n n 
C20 H13 JDA sing 217 n n 
C21 H14 JDA sing 218 n n 
C21 H15 JDA sing 219 n n 
C21 H16 JDA sing 220 n n 
C22 H17 JDA sing 221 n n 
C22 H18 JDA sing 222 n n 
C22 H19 JDA sing 223 n n 
C5 H20 JDA sing 224 n n 
C5 H21 JDA sing 225 n n 
C7 H22 JDA sing 226 n n 
C8 H23 JDA sing 227 n n 
N2 H24 JDA sing 228 n n 
#
_atom_sites.entry_id                     9FCJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN D 1 1000 1000 ZN ZN . 
D 4 JDA D 1 1001 1001 JDA ml3 . 
E 5 HOH C 1 101 11 HOH HOH . 
E 5 HOH C 2 102 20 HOH HOH . 
E 5 HOH C 3 103 44 HOH HOH . 
E 5 HOH C 4 104 2 HOH HOH . 
E 5 HOH C 5 105 7 HOH HOH . 
E 5 HOH C 6 106 5 HOH HOH . 
E 5 HOH C 7 107 45 HOH HOH . 
E 5 HOH C 8 108 14 HOH HOH . 
F 5 HOH D 1 1101 40 HOH HOH . 
F 5 HOH D 2 1102 22 HOH HOH . 
F 5 HOH D 3 1103 23 HOH HOH . 
F 5 HOH D 4 1104 19 HOH HOH . 
F 5 HOH D 5 1105 49 HOH HOH . 
F 5 HOH D 6 1106 43 HOH HOH . 
F 5 HOH D 7 1107 1 HOH HOH . 
F 5 HOH D 8 1108 21 HOH HOH . 
F 5 HOH D 9 1109 55 HOH HOH . 
F 5 HOH D 10 1110 24 HOH HOH . 
F 5 HOH D 11 1111 39 HOH HOH . 
F 5 HOH D 12 1112 16 HOH HOH . 
F 5 HOH D 13 1113 15 HOH HOH . 
F 5 HOH D 14 1114 17 HOH HOH . 
F 5 HOH D 15 1115 36 HOH HOH . 
F 5 HOH D 16 1116 26 HOH HOH . 
F 5 HOH D 17 1117 3 HOH HOH . 
F 5 HOH D 18 1118 4 HOH HOH . 
F 5 HOH D 19 1119 33 HOH HOH . 
F 5 HOH D 20 1120 25 HOH HOH . 
F 5 HOH D 21 1121 30 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N JDA . . . D 4 164.186 123.07 130.057 1 10.86 ? N JDA 1001 D 1 
HETATM 2 C C JDA . . . D 4 161.85 120.467 131.48 1 10.86 ? C JDA 1001 D 1 
HETATM 3 C C1 JDA . . . D 4 162.781 121.181 130.535 1 10.86 ? C1 JDA 1001 D 1 
HETATM 4 C C10 JDA . . . D 4 159.954 119.013 125.436 1 10.86 ? C10 JDA 1001 D 1 
HETATM 5 C C11 JDA . . . D 4 160.807 118.74 126.49 1 10.86 ? C11 JDA 1001 D 1 
HETATM 6 C C12 JDA . . . D 4 158.197 119.911 123.179 1 10.86 ? C12 JDA 1001 D 1 
HETATM 7 C C13 JDA . . . D 4 157.894 120.205 121.895 1 10.86 ? C13 JDA 1001 D 1 
HETATM 8 C C14 JDA . . . D 4 165.472 123.165 128.017 1 10.86 ? C14 JDA 1001 D 1 
HETATM 9 C C15 JDA . . . D 4 165.083 123.393 126.696 1 10.86 ? C15 JDA 1001 D 1 
HETATM 10 C C16 JDA . . . D 4 165.937 124.02 125.806 1 10.86 ? C16 JDA 1001 D 1 
HETATM 11 C C17 JDA . . . D 4 167.183 124.432 126.216 1 10.86 ? C17 JDA 1001 D 1 
HETATM 12 C C18 JDA . . . D 4 167.59 124.22 127.521 1 10.86 ? C18 JDA 1001 D 1 
HETATM 13 C C19 JDA . . . D 4 166.748 123.588 128.431 1 10.86 ? C19 JDA 1001 D 1 
HETATM 14 C C2 JDA . . . D 4 163.329 122.415 130.84 1 10.86 ? C2 JDA 1001 D 1 
HETATM 15 C C20 JDA . . . D 4 167.237 123.36 129.852 1 10.86 ? C20 JDA 1001 D 1 
HETATM 16 C C21 JDA . . . D 4 168.084 122.096 129.96 1 10.86 ? C21 JDA 1001 D 1 
HETATM 17 C C22 JDA . . . D 4 168.011 124.565 130.38 1 10.86 ? C22 JDA 1001 D 1 
HETATM 18 C C3 JDA . . . D 4 164.519 122.459 128.91 1 10.86 ? C3 JDA 1001 D 1 
HETATM 19 C C4 JDA . . . D 4 163.185 120.639 129.298 1 10.86 ? C4 JDA 1001 D 1 
HETATM 20 C C5 JDA . . . D 4 163.055 118.851 127.62 1 10.86 ? C5 JDA 1001 D 1 
HETATM 21 C C6 JDA . . . D 4 162.12 119.19 126.486 1 10.86 ? C6 JDA 1001 D 1 
HETATM 22 C C7 JDA . . . D 4 162.557 119.936 125.4 1 10.86 ? C7 JDA 1001 D 1 
HETATM 23 C C8 JDA . . . D 4 161.714 120.216 124.339 1 10.86 ? C8 JDA 1001 D 1 
HETATM 24 C C9 JDA . . . D 4 160.409 119.747 124.352 1 10.86 ? C9 JDA 1001 D 1 
HETATM 25 N N1 JDA . . . D 4 164.053 121.269 128.493 1 10.86 ? N1 JDA 1001 D 1 
HETATM 26 N N2 JDA . . . D 4 162.683 119.465 128.883 1 10.86 ? N2 JDA 1001 D 1 
HETATM 27 N N3 JDA . . . D 4 159.55 119.986 123.238 1 10.86 ? N3 JDA 1001 D 1 
HETATM 28 N N4 JDA . . . D 4 159.044 120.448 121.214 1 10.86 ? N4 JDA 1001 D 1 
HETATM 29 N N5 JDA . . . D 4 160.066 120.317 122.031 1 10.86 ? N5 JDA 1001 D 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           29 
#