data_9FDT # _model_server_result.job_id Ysp5iNuEd7jgOOhc-lobhw _model_server_result.datetime_utc '2025-06-24 22:07:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fdt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 9FDT # _exptl.entry_id 9FDT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.224 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[2-[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]phenyl]methanol' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.67 _cell.angle_gamma 90 _cell.entry_id 9FDT _cell.length_a 35.817 _cell.length_b 73.18 _cell.length_c 54.959 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FDT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 143 A CYS 195 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc2 A SG CYS 148 A CYS 200 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc3 A SG CYS 169 A CYS 221 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc4 A SG CYS 172 A CYS 224 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C12 H11 F3 N2 O' _chem_comp.formula_weight 256.224 _chem_comp.id A1IBW _chem_comp.mon_nstd_flag . _chem_comp.name '[2-[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]phenyl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C4 A1IBW sing 1 n n F C4 A1IBW sing 2 n n C4 F2 A1IBW sing 3 n n C4 C3 A1IBW sing 4 n n N1 C3 A1IBW doub 5 n y N1 N A1IBW sing 6 n y C3 C2 A1IBW sing 7 n y C N A1IBW sing 8 n n N C1 A1IBW sing 9 n y C2 C1 A1IBW doub 10 n y C1 C5 A1IBW sing 11 n n C5 C6 A1IBW doub 12 n y C5 C10 A1IBW sing 13 n y C6 C7 A1IBW sing 14 n y C7 C8 A1IBW doub 15 n y C10 C11 A1IBW sing 16 n n C10 C9 A1IBW doub 17 n y C11 O A1IBW sing 18 n n C8 C9 A1IBW sing 19 n y C2 H1 A1IBW sing 20 n n C6 H2 A1IBW sing 21 n n C7 H3 A1IBW sing 22 n n C8 H4 A1IBW sing 23 n n C9 H5 A1IBW sing 24 n n C H6 A1IBW sing 25 n n C H7 A1IBW sing 26 n n C H8 A1IBW sing 27 n n O H9 A1IBW sing 28 n n C11 H10 A1IBW sing 29 n n C11 H11 A1IBW sing 30 n n # _atom_sites.entry_id 9FDT _atom_sites.fract_transf_matrix[1][1] 0.02792 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002772 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 3 CL A 1 402 1 CL CL . D 4 DMS A 1 403 411 DMS DMS . E 5 EDO A 1 404 412 EDO EDO . F 5 EDO A 1 405 413 EDO EDO . G 5 EDO A 1 406 414 EDO EDO . H 6 A1IBW A 1 407 410 A1IBW H15 . I 7 HOH A 1 501 164 HOH HOH . I 7 HOH A 2 502 147 HOH HOH . I 7 HOH A 3 503 126 HOH HOH . I 7 HOH A 4 504 71 HOH HOH . I 7 HOH A 5 505 139 HOH HOH . I 7 HOH A 6 506 133 HOH HOH . I 7 HOH A 7 507 64 HOH HOH . I 7 HOH A 8 508 51 HOH HOH . I 7 HOH A 9 509 63 HOH HOH . I 7 HOH A 10 510 84 HOH HOH . I 7 HOH A 11 511 155 HOH HOH . I 7 HOH A 12 512 27 HOH HOH . I 7 HOH A 13 513 59 HOH HOH . I 7 HOH A 14 514 10 HOH HOH . I 7 HOH A 15 515 115 HOH HOH . I 7 HOH A 16 516 162 HOH HOH . I 7 HOH A 17 517 99 HOH HOH . I 7 HOH A 18 518 20 HOH HOH . I 7 HOH A 19 519 22 HOH HOH . I 7 HOH A 20 520 33 HOH HOH . I 7 HOH A 21 521 173 HOH HOH . I 7 HOH A 22 522 52 HOH HOH . I 7 HOH A 23 523 28 HOH HOH . I 7 HOH A 24 524 49 HOH HOH . I 7 HOH A 25 525 29 HOH HOH . I 7 HOH A 26 526 21 HOH HOH . I 7 HOH A 27 527 65 HOH HOH . I 7 HOH A 28 528 57 HOH HOH . I 7 HOH A 29 529 23 HOH HOH . I 7 HOH A 30 530 30 HOH HOH . I 7 HOH A 31 531 90 HOH HOH . I 7 HOH A 32 532 36 HOH HOH . I 7 HOH A 33 533 123 HOH HOH . I 7 HOH A 34 534 172 HOH HOH . I 7 HOH A 35 535 106 HOH HOH . I 7 HOH A 36 536 54 HOH HOH . I 7 HOH A 37 537 58 HOH HOH . I 7 HOH A 38 538 26 HOH HOH . I 7 HOH A 39 539 61 HOH HOH . I 7 HOH A 40 540 4 HOH HOH . I 7 HOH A 41 541 114 HOH HOH . I 7 HOH A 42 542 157 HOH HOH . I 7 HOH A 43 543 45 HOH HOH . I 7 HOH A 44 544 121 HOH HOH . I 7 HOH A 45 545 15 HOH HOH . I 7 HOH A 46 546 166 HOH HOH . I 7 HOH A 47 547 94 HOH HOH . I 7 HOH A 48 548 8 HOH HOH . I 7 HOH A 49 549 31 HOH HOH . I 7 HOH A 50 550 161 HOH HOH . I 7 HOH A 51 551 32 HOH HOH . I 7 HOH A 52 552 6 HOH HOH . I 7 HOH A 53 553 40 HOH HOH . I 7 HOH A 54 554 17 HOH HOH . I 7 HOH A 55 555 111 HOH HOH . I 7 HOH A 56 556 66 HOH HOH . I 7 HOH A 57 557 107 HOH HOH . I 7 HOH A 58 558 69 HOH HOH . I 7 HOH A 59 559 109 HOH HOH . I 7 HOH A 60 560 62 HOH HOH . I 7 HOH A 61 561 78 HOH HOH . I 7 HOH A 62 562 55 HOH HOH . I 7 HOH A 63 563 67 HOH HOH . I 7 HOH A 64 564 7 HOH HOH . I 7 HOH A 65 565 80 HOH HOH . I 7 HOH A 66 566 124 HOH HOH . I 7 HOH A 67 567 130 HOH HOH . I 7 HOH A 68 568 143 HOH HOH . I 7 HOH A 69 569 46 HOH HOH . I 7 HOH A 70 570 93 HOH HOH . I 7 HOH A 71 571 12 HOH HOH . I 7 HOH A 72 572 2 HOH HOH . I 7 HOH A 73 573 53 HOH HOH . I 7 HOH A 74 574 18 HOH HOH . I 7 HOH A 75 575 75 HOH HOH . I 7 HOH A 76 576 131 HOH HOH . I 7 HOH A 77 577 19 HOH HOH . I 7 HOH A 78 578 25 HOH HOH . I 7 HOH A 79 579 146 HOH HOH . I 7 HOH A 80 580 56 HOH HOH . I 7 HOH A 81 581 112 HOH HOH . I 7 HOH A 82 582 1 HOH HOH . I 7 HOH A 83 583 83 HOH HOH . I 7 HOH A 84 584 128 HOH HOH . I 7 HOH A 85 585 43 HOH HOH . I 7 HOH A 86 586 76 HOH HOH . I 7 HOH A 87 587 16 HOH HOH . I 7 HOH A 88 588 14 HOH HOH . I 7 HOH A 89 589 44 HOH HOH . I 7 HOH A 90 590 13 HOH HOH . I 7 HOH A 91 591 11 HOH HOH . I 7 HOH A 92 592 151 HOH HOH . I 7 HOH A 93 593 74 HOH HOH . I 7 HOH A 94 594 169 HOH HOH . I 7 HOH A 95 595 91 HOH HOH . I 7 HOH A 96 596 3 HOH HOH . I 7 HOH A 97 597 103 HOH HOH . I 7 HOH A 98 598 122 HOH HOH . I 7 HOH A 99 599 34 HOH HOH . I 7 HOH A 100 600 140 HOH HOH . I 7 HOH A 101 601 38 HOH HOH . I 7 HOH A 102 602 81 HOH HOH . I 7 HOH A 103 603 156 HOH HOH . I 7 HOH A 104 604 104 HOH HOH . I 7 HOH A 105 605 125 HOH HOH . I 7 HOH A 106 606 39 HOH HOH . I 7 HOH A 107 607 73 HOH HOH . I 7 HOH A 108 608 177 HOH HOH . I 7 HOH A 109 609 24 HOH HOH . I 7 HOH A 110 610 102 HOH HOH . I 7 HOH A 111 611 68 HOH HOH . I 7 HOH A 112 612 95 HOH HOH . I 7 HOH A 113 613 120 HOH HOH . I 7 HOH A 114 614 50 HOH HOH . I 7 HOH A 115 615 108 HOH HOH . I 7 HOH A 116 616 70 HOH HOH . I 7 HOH A 117 617 47 HOH HOH . I 7 HOH A 118 618 98 HOH HOH . I 7 HOH A 119 619 5 HOH HOH . I 7 HOH A 120 620 89 HOH HOH . I 7 HOH A 121 621 86 HOH HOH . I 7 HOH A 122 622 72 HOH HOH . I 7 HOH A 123 623 180 HOH HOH . I 7 HOH A 124 624 37 HOH HOH . I 7 HOH A 125 625 178 HOH HOH . I 7 HOH A 126 626 170 HOH HOH . I 7 HOH A 127 627 87 HOH HOH . I 7 HOH A 128 628 113 HOH HOH . I 7 HOH A 129 629 152 HOH HOH . I 7 HOH A 130 630 105 HOH HOH . I 7 HOH A 131 631 167 HOH HOH . I 7 HOH A 132 632 149 HOH HOH . I 7 HOH A 133 633 163 HOH HOH . I 7 HOH A 134 634 144 HOH HOH . I 7 HOH A 135 635 136 HOH HOH . I 7 HOH A 136 636 88 HOH HOH . I 7 HOH A 137 637 160 HOH HOH . I 7 HOH A 138 638 175 HOH HOH . I 7 HOH A 139 639 92 HOH HOH . I 7 HOH A 140 640 137 HOH HOH . I 7 HOH A 141 641 176 HOH HOH . I 7 HOH A 142 642 60 HOH HOH . I 7 HOH A 143 643 100 HOH HOH . I 7 HOH A 144 644 42 HOH HOH . I 7 HOH A 145 645 48 HOH HOH . I 7 HOH A 146 646 154 HOH HOH . I 7 HOH A 147 647 179 HOH HOH . I 7 HOH A 148 648 159 HOH HOH . I 7 HOH A 149 649 85 HOH HOH . I 7 HOH A 150 650 141 HOH HOH . I 7 HOH A 151 651 138 HOH HOH . I 7 HOH A 152 652 153 HOH HOH . I 7 HOH A 153 653 119 HOH HOH . I 7 HOH A 154 654 174 HOH HOH . I 7 HOH A 155 655 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 A1IBW . . . H 6 -0.295 21.882 8.462 1 33.96 ? C2 A1IBW 407 A 1 HETATM 2 C C1 A1IBW . . . H 6 -0.148 23.192 8.876 1 37.75 ? C1 A1IBW 407 A 1 HETATM 3 C C3 A1IBW . . . H 6 -0.759 21.969 7.145 1 39.34 ? C3 A1IBW 407 A 1 HETATM 4 C C4 A1IBW . . . H 6 -1.076 20.865 6.194 1 42.54 ? C4 A1IBW 407 A 1 HETATM 5 C C5 A1IBW . . . H 6 0.346 23.717 10.165 1 35.8 ? C5 A1IBW 407 A 1 HETATM 6 C C6 A1IBW . . . H 6 1.528 24.458 10.171 1 32.82 ? C6 A1IBW 407 A 1 HETATM 7 C C7 A1IBW . . . H 6 2.051 24.939 11.358 1 33.71 ? C7 A1IBW 407 A 1 HETATM 8 C C8 A1IBW . . . H 6 1.399 24.701 12.546 1 36.93 ? C8 A1IBW 407 A 1 HETATM 9 C C9 A1IBW . . . H 6 0.22 23.975 12.557 1 32.72 ? C9 A1IBW 407 A 1 HETATM 10 C C10 A1IBW . . . H 6 -0.322 23.47 11.377 1 39.96 ? C10 A1IBW 407 A 1 HETATM 11 N N A1IBW . . . H 6 -0.525 23.968 7.825 1 34.07 ? N A1IBW 407 A 1 HETATM 12 C C A1IBW . . . H 6 -0.583 25.423 7.732 1 39.46 ? C A1IBW 407 A 1 HETATM 13 O O A1IBW . . . H 6 -2.407 23.016 12.524 1 53.48 ? O A1IBW 407 A 1 HETATM 14 C C11 A1IBW . . . H 6 -1.59 22.653 11.429 1 44.53 ? C11 A1IBW 407 A 1 HETATM 15 F F A1IBW . . . H 6 0.004 20.148 5.883 1 44.15 ? F A1IBW 407 A 1 HETATM 16 F F1 A1IBW . . . H 6 -1.582 21.316 5.047 1 43.36 ? F1 A1IBW 407 A 1 HETATM 17 F F2 A1IBW . . . H 6 -1.966 20.02 6.692 1 48.34 ? F2 A1IBW 407 A 1 HETATM 18 N N1 A1IBW . . . H 6 -0.901 23.226 6.748 1 35.62 ? N1 A1IBW 407 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #