data_9FGN # _model_server_result.job_id -LXq3iSxw2DL_VVWhDgQTA _model_server_result.datetime_utc '2024-11-04 23:11:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fgn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 9FGN # _exptl.entry_id 9FGN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 331.403 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-4-[(4-methylpiperazin-1-yl)methyl]aniline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FGN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 240-meric _pdbx_struct_assembly.oligomeric_count 240 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.30902 0.5 -0.80902 0.5 -0.80902 -0.30902 -0.80902 -0.30902 -0.5 218.25 353.14 571.39 3 'point symmetry operation' ? ? 0 0 -1 -1 0 0 0 1 0 436.5 436.5 -0.000015 4 'point symmetry operation' ? ? -0.30902 0.5 -0.80902 0.5 0.80902 0.30902 0.80902 -0.30902 -0.5 353.14 -134.89 218.25 5 'point symmetry operation' ? ? -0.80902 0.30902 -0.5 -0.30902 0.5 0.80902 0.5 0.80902 -0.30902 436.5 0.000008 -0.000012 6 'point symmetry operation' ? ? 0.5 0.80902 -0.30902 0.80902 -0.30902 0.5 0.30902 -0.5 -0.80902 -0.000012 0.00002 436.5 7 'point symmetry operation' ? ? 0.30902 -0.5 -0.80902 -0.5 -0.80902 0.30902 -0.80902 0.30902 -0.5 436.5 436.5 436.5 8 'point symmetry operation' ? ? -0.30902 -0.5 -0.80902 0.5 -0.80902 0.30902 -0.80902 -0.30902 0.5 571.39 218.25 353.14 9 'point symmetry operation' ? ? -0.5 0.80902 -0.30902 -0.80902 -0.30902 0.5 0.30902 0.5 0.80902 218.25 353.14 -134.89 10 'point symmetry operation' ? ? 0.80902 0.30902 -0.5 0.30902 0.5 0.80902 0.5 -0.80902 0.30902 83.364 -134.89 218.25 11 'point symmetry operation' ? ? 0 1 0 0 0 1 1 0 0 -0.000015 0.000015 0 12 'point symmetry operation' ? ? 0.80902 -0.30902 -0.5 0.30902 -0.5 0.80902 -0.5 -0.80902 -0.30902 218.25 83.364 571.39 13 'point symmetry operation' ? ? -0.80902 -0.30902 -0.5 -0.30902 -0.5 0.80902 -0.5 0.80902 0.30902 571.39 218.25 83.364 14 'point symmetry operation' ? ? -0.5 -0.80902 0.30902 0.80902 -0.30902 0.5 -0.30902 0.5 0.80902 436.5 0.00002 -0.000008 15 'point symmetry operation' ? ? -0.30902 0.5 0.80902 -0.5 -0.80902 0.30902 0.80902 -0.30902 0.5 -0.000008 436.5 0.000005 16 'point symmetry operation' ? ? 0.80902 -0.30902 0.5 -0.30902 0.5 0.80902 -0.5 -0.80902 0.30902 0.000005 0.000008 436.5 17 'point symmetry operation' ? ? 0.80902 0.30902 0.5 -0.30902 -0.5 0.80902 0.5 -0.80902 -0.30902 -134.89 218.25 353.14 18 'point symmetry operation' ? ? 0 -1 0 0 0 1 -1 0 0 436.5 0.000015 436.5 19 'point symmetry operation' ? ? -0.80902 0.30902 0.5 0.30902 -0.5 0.80902 0.5 0.80902 0.30902 218.25 83.364 -134.89 20 'point symmetry operation' ? ? 0 0 1 1 0 0 0 1 0 0 0.000015 -0.000015 21 'point symmetry operation' ? ? 0.30902 -0.5 0.80902 -0.5 -0.80902 -0.30902 0.80902 -0.30902 -0.5 83.364 571.39 218.25 22 'point symmetry operation' ? ? -0.30902 -0.5 0.80902 -0.5 0.80902 0.30902 -0.80902 -0.30902 -0.5 218.25 83.364 571.39 23 'point symmetry operation' ? ? 0.5 -0.80902 0.30902 -0.80902 -0.30902 0.5 -0.30902 -0.5 -0.80902 218.25 353.14 571.39 24 'point symmetry operation' ? ? -0.80902 -0.30902 0.5 0.30902 0.5 0.80902 -0.5 0.80902 -0.30902 353.14 -134.89 218.25 25 'point symmetry operation' ? ? 0.30902 0.5 0.80902 0.5 -0.80902 0.30902 0.80902 0.30902 -0.5 -134.89 218.25 83.364 26 'point symmetry operation' ? ? 0.5 0.80902 0.30902 0.80902 -0.30902 -0.5 -0.30902 0.5 -0.80902 -134.89 218.25 353.14 27 'point symmetry operation' ? ? 0.5 -0.80902 -0.30902 -0.80902 -0.30902 -0.5 0.30902 0.5 -0.80902 353.14 571.39 218.25 28 'point symmetry operation' ? ? -1 0 0 0 1 0 0 0 -1 436.5 0 436.5 29 'point symmetry operation' ? ? -0.5 -0.80902 -0.30902 -0.80902 0.30902 0.5 -0.30902 0.5 -0.80902 571.39 218.25 353.14 30 'point symmetry operation' ? ? -0.5 0.80902 0.30902 0.80902 0.30902 0.5 0.30902 0.5 -0.80902 83.364 -134.89 218.25 31 'point symmetry operation' ? ? 1 0 0 0 -1 0 0 0 -1 0 436.5 436.5 32 'point symmetry operation' ? ? 0.30902 0.5 -0.80902 -0.5 0.80902 0.30902 0.80902 0.30902 0.5 218.25 83.364 -134.89 33 'point symmetry operation' ? ? 0 0 -1 1 0 0 0 -1 0 436.5 0.000015 436.5 34 'point symmetry operation' ? ? -0.30902 0.5 -0.80902 -0.5 -0.80902 -0.30902 -0.80902 0.30902 0.5 353.14 571.39 218.25 35 'point symmetry operation' ? ? -0.80902 0.30902 -0.5 0.30902 -0.5 -0.80902 -0.5 -0.80902 0.30902 436.5 436.5 436.5 36 'point symmetry operation' ? ? 0.5 0.80902 -0.30902 -0.80902 0.30902 -0.5 -0.30902 0.5 0.80902 -0.000012 436.5 -0.000008 37 'point symmetry operation' ? ? 0.30902 -0.5 -0.80902 0.5 0.80902 -0.30902 0.80902 -0.30902 0.5 436.5 0.000003 0.000005 38 'point symmetry operation' ? ? -0.30902 -0.5 -0.80902 -0.5 0.80902 -0.30902 0.80902 0.30902 -0.5 571.39 218.25 83.364 39 'point symmetry operation' ? ? -0.5 0.80902 -0.30902 0.80902 0.30902 -0.5 -0.30902 -0.5 -0.80902 218.25 83.364 571.39 40 'point symmetry operation' ? ? 0.80902 0.30902 -0.5 -0.30902 -0.5 -0.80902 -0.5 0.80902 -0.30902 83.364 571.39 218.25 41 'point symmetry operation' ? ? 0 1 0 0 0 -1 -1 0 0 -0.000015 436.5 436.5 42 'point symmetry operation' ? ? 0.80902 -0.30902 -0.5 -0.30902 0.5 -0.80902 0.5 0.80902 0.30902 218.25 353.14 -134.89 43 'point symmetry operation' ? ? -0.80902 -0.30902 -0.5 0.30902 0.5 -0.80902 0.5 -0.80902 -0.30902 571.39 218.25 353.14 44 'point symmetry operation' ? ? -0.5 -0.80902 0.30902 -0.80902 0.30902 -0.5 0.30902 -0.5 -0.80902 436.5 436.5 436.5 45 'point symmetry operation' ? ? -0.30902 0.5 0.80902 0.5 0.80902 -0.30902 -0.80902 0.30902 -0.5 -0.000008 0.000003 436.5 46 'point symmetry operation' ? ? 0.80902 -0.30902 0.5 0.30902 -0.5 -0.80902 0.5 0.80902 -0.30902 0.000005 436.5 -0.000012 47 'point symmetry operation' ? ? 0.80902 0.30902 0.5 0.30902 0.5 -0.80902 -0.5 0.80902 0.30902 -134.89 218.25 83.364 48 'point symmetry operation' ? ? 0 -1 0 0 0 -1 1 0 0 436.5 436.5 0 49 'point symmetry operation' ? ? -0.80902 0.30902 0.5 -0.30902 0.5 -0.80902 -0.5 -0.80902 -0.30902 218.25 353.14 571.39 50 'point symmetry operation' ? ? 0 0 1 -1 0 0 0 -1 0 0 436.5 436.5 51 'point symmetry operation' ? ? 0.30902 -0.5 0.80902 0.5 0.80902 0.30902 -0.80902 0.30902 0.5 83.364 -134.89 218.25 52 'point symmetry operation' ? ? -0.30902 -0.5 0.80902 0.5 -0.80902 -0.30902 0.80902 0.30902 0.5 218.25 353.14 -134.89 53 'point symmetry operation' ? ? 0.5 -0.80902 0.30902 0.80902 0.30902 -0.5 0.30902 0.5 0.80902 218.25 83.364 -134.89 54 'point symmetry operation' ? ? -0.80902 -0.30902 0.5 -0.30902 -0.5 -0.80902 0.5 -0.80902 0.30902 353.14 571.39 218.25 55 'point symmetry operation' ? ? 0.30902 0.5 0.80902 -0.5 0.80902 -0.30902 -0.80902 -0.30902 0.5 -134.89 218.25 353.14 56 'point symmetry operation' ? ? 0.5 0.80902 0.30902 -0.80902 0.30902 0.5 0.30902 -0.5 0.80902 -134.89 218.25 83.364 57 'point symmetry operation' ? ? 0.5 -0.80902 -0.30902 0.80902 0.30902 0.5 -0.30902 -0.5 0.80902 353.14 -134.89 218.25 58 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 436.5 436.5 0 59 'point symmetry operation' ? ? -0.5 -0.80902 -0.30902 0.80902 -0.30902 -0.5 0.30902 -0.5 0.80902 571.39 218.25 83.364 60 'point symmetry operation' ? ? -0.5 0.80902 0.30902 -0.80902 -0.30902 -0.5 -0.30902 -0.5 0.80902 83.364 571.39 218.25 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H23 F2 N3' _chem_comp.formula_weight 331.403 _chem_comp.id A1ICH _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-4-[(4-methylpiperazin-1-yl)methyl]aniline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F2 C17 A1ICH sing 1 n n C17 C18 A1ICH doub 2 n y C17 C16 A1ICH sing 3 n y C18 C19 A1ICH sing 4 n y C16 C15 A1ICH doub 5 n y C19 C14 A1ICH doub 6 n y C15 C14 A1ICH sing 7 n y C15 F1 A1ICH sing 8 n n C14 C13 A1ICH sing 9 n n C13 N3 A1ICH sing 10 n n N3 C12 A1ICH sing 11 n n C12 C11 A1ICH doub 12 n y C12 C9 A1ICH sing 13 n y C11 C10 A1ICH sing 14 n y C9 C8 A1ICH doub 15 n y C10 C7 A1ICH doub 16 n y C8 C7 A1ICH sing 17 n y C7 C6 A1ICH sing 18 n n C6 N2 A1ICH sing 19 n n N2 C3 A1ICH sing 20 n n N2 C5 A1ICH sing 21 n n C3 C2 A1ICH sing 22 n n C5 C4 A1ICH sing 23 n n C2 N1 A1ICH sing 24 n n C4 N1 A1ICH sing 25 n n N1 C1 A1ICH sing 26 n n C1 H3 A1ICH sing 27 n n C1 H2 A1ICH sing 28 n n C1 H1 A1ICH sing 29 n n C2 H4 A1ICH sing 30 n n C2 H5 A1ICH sing 31 n n C3 H6 A1ICH sing 32 n n C3 H7 A1ICH sing 33 n n C4 H8 A1ICH sing 34 n n C4 H9 A1ICH sing 35 n n C5 H10 A1ICH sing 36 n n C5 H11 A1ICH sing 37 n n C6 H12 A1ICH sing 38 n n C6 H13 A1ICH sing 39 n n C8 H14 A1ICH sing 40 n n C9 H15 A1ICH sing 41 n n C10 H16 A1ICH sing 42 n n C11 H17 A1ICH sing 43 n n N3 H18 A1ICH sing 44 n n C13 H19 A1ICH sing 45 n n C13 H20 A1ICH sing 46 n n C16 H21 A1ICH sing 47 n n C18 H22 A1ICH sing 48 n n C19 H23 A1ICH sing 49 n n # _atom_sites.entry_id 9FGN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id A1ICH _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 301 _pdbx_nonpoly_scheme.pdb_mon_id A1ICH _pdbx_nonpoly_scheme.auth_mon_id UNL _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1ICH . . . E 5 331.438 281.115 256.065 1 0 ? C1 A1ICH 301 A 1 HETATM 2 N N1 A1ICH . . . E 5 330.506 280.774 254.985 1 0 ? N1 A1ICH 301 A 1 HETATM 3 C C2 A1ICH . . . E 5 331.305 280.649 253.765 1 0 ? C2 A1ICH 301 A 1 HETATM 4 C C3 A1ICH . . . E 5 330.384 280.417 252.564 1 0 ? C3 A1ICH 301 A 1 HETATM 5 C C4 A1ICH . . . E 5 329.627 281.94 254.803 1 0 ? C4 A1ICH 301 A 1 HETATM 6 C C5 A1ICH . . . E 5 328.707 281.708 253.602 1 0 ? C5 A1ICH 301 A 1 HETATM 7 N N2 A1ICH . . . E 5 329.508 281.58 252.383 1 0 ? N2 A1ICH 301 A 1 HETATM 8 C C6 A1ICH . . . E 5 328.573 281.244 251.301 1 0 ? C6 A1ICH 301 A 1 HETATM 9 C C7 A1ICH . . . E 5 329.352 280.855 250.069 1 0 ? C7 A1ICH 301 A 1 HETATM 10 C C8 A1ICH . . . E 5 329.708 279.536 249.863 1 0 ? C8 A1ICH 301 A 1 HETATM 11 C C9 A1ICH . . . E 5 330.419 279.179 248.734 1 0 ? C9 A1ICH 301 A 1 HETATM 12 C C10 A1ICH . . . E 5 329.702 281.823 249.143 1 0 ? C10 A1ICH 301 A 1 HETATM 13 C C11 A1ICH . . . E 5 330.418 281.472 248.012 1 0 ? C11 A1ICH 301 A 1 HETATM 14 C C12 A1ICH . . . E 5 330.78 280.149 247.806 1 0 ? C12 A1ICH 301 A 1 HETATM 15 N N3 A1ICH . . . E 5 331.499 279.79 246.66 1 0 ? N3 A1ICH 301 A 1 HETATM 16 C C13 A1ICH . . . E 5 331.885 278.393 246.444 1 0 ? C13 A1ICH 301 A 1 HETATM 17 C C14 A1ICH . . . E 5 332.648 278.277 245.153 1 0 ? C14 A1ICH 301 A 1 HETATM 18 C C15 A1ICH . . . E 5 333.99 278.616 245.105 1 0 ? C15 A1ICH 301 A 1 HETATM 19 F F1 A1ICH . . . E 5 334.615 279.053 246.221 1 0 ? F1 A1ICH 301 A 1 HETATM 20 C C16 A1ICH . . . E 5 334.687 278.509 243.919 1 0 ? C16 A1ICH 301 A 1 HETATM 21 C C17 A1ICH . . . E 5 334.049 278.063 242.773 1 0 ? C17 A1ICH 301 A 1 HETATM 22 F F2 A1ICH . . . E 5 334.729 277.955 241.614 1 0 ? F2 A1ICH 301 A 1 HETATM 23 C C18 A1ICH . . . E 5 332.704 277.724 242.822 1 0 ? C18 A1ICH 301 A 1 HETATM 24 C C19 A1ICH . . . E 5 332.007 277.829 244.015 1 0 ? C19 A1ICH 301 A 1 HETATM 25 H H3 A1ICH . . . E 5 332.18 280.32 256.168 1 0 ? H3 A1ICH 301 A 1 HETATM 26 H H2 A1ICH . . . E 5 330.889 281.219 257 1 0 ? H2 A1ICH 301 A 1 HETATM 27 H H1 A1ICH . . . E 5 331.941 282.055 255.835 1 0 ? H1 A1ICH 301 A 1 HETATM 28 H H4 A1ICH . . . E 5 331.879 281.566 253.606 1 0 ? H4 A1ICH 301 A 1 HETATM 29 H H5 A1ICH . . . E 5 331.993 279.806 253.861 1 0 ? H5 A1ICH 301 A 1 HETATM 30 H H6 A1ICH . . . E 5 330.985 280.269 251.667 1 0 ? H6 A1ICH 301 A 1 HETATM 31 H H7 A1ICH . . . E 5 329.772 279.528 252.742 1 0 ? H7 A1ICH 301 A 1 HETATM 32 H H8 A1ICH . . . E 5 329.029 282.084 255.699 1 0 ? H8 A1ICH 301 A 1 HETATM 33 H H9 A1ICH . . . E 5 330.239 282.828 254.625 1 0 ? H9 A1ICH 301 A 1 HETATM 34 H H10 A1ICH . . . E 5 328.134 280.792 253.762 1 0 ? H10 A1ICH 301 A 1 HETATM 35 H H11 A1ICH . . . E 5 328.021 282.551 253.508 1 0 ? H11 A1ICH 301 A 1 HETATM 36 H H12 A1ICH . . . E 5 327.947 280.405 251.611 1 0 ? H12 A1ICH 301 A 1 HETATM 37 H H13 A1ICH . . . E 5 327.948 282.107 251.078 1 0 ? H13 A1ICH 301 A 1 HETATM 38 H H14 A1ICH . . . E 5 329.43 278.784 250.584 1 0 ? H14 A1ICH 301 A 1 HETATM 39 H H15 A1ICH . . . E 5 330.699 278.147 248.572 1 0 ? H15 A1ICH 301 A 1 HETATM 40 H H16 A1ICH . . . E 5 329.421 282.854 249.302 1 0 ? H16 A1ICH 301 A 1 HETATM 41 H H17 A1ICH . . . E 5 330.691 282.229 247.292 1 0 ? H17 A1ICH 301 A 1 HETATM 42 H H18 A1ICH . . . E 5 331.745 280.468 246.014 1 0 ? H18 A1ICH 301 A 1 HETATM 43 H H19 A1ICH . . . E 5 332.515 278.056 247.269 1 0 ? H19 A1ICH 301 A 1 HETATM 44 H H20 A1ICH . . . E 5 330.989 277.775 246.396 1 0 ? H20 A1ICH 301 A 1 HETATM 45 H H21 A1ICH . . . E 5 335.737 278.776 243.881 1 0 ? H21 A1ICH 301 A 1 HETATM 46 H H22 A1ICH . . . E 5 332.204 277.374 241.933 1 0 ? H22 A1ICH 301 A 1 HETATM 47 H H23 A1ICH . . . E 5 330.962 277.563 244.049 1 0 ? H23 A1ICH 301 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 47 #