data_9FHB
#
_model_server_result.job_id            AWohjEad6eLWhDX4HqEgrg 
_model_server_result.datetime_utc      '2024-12-23 00:36:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9fhb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    9FHB 
#
_exptl.entry_id    9FHB 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9FHB 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9FHB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 C SG CYS 149 C CYS 149 1_555 C SG CYS 266 C CYS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 C SG CYS 309 C CYS 309 1_555 C SG CYS 340 C CYS 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf3 C SG CYS 351 C CYS 351 1_555 C SG CYS 381 C CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 D SG CYS 168 D CYS 168 1_555 D SG CYS 202 D CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf5 D SG CYS 184 D CYS 184 1_555 D SG CYS 248 D CYS 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf6 D SG CYS 197 D CYS 197 1_555 D SG CYS 258 D CYS 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 D SG CYS 228 D CYS 228 1_555 D SG CYS 238 D CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf8 D SG CYS 275 D CYS 275 1_555 D SG CYS 309 D CYS 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf9 D SG CYS 291 D CYS 291 1_555 D SG CYS 355 D CYS 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf10 D SG CYS 304 D CYS 304 1_555 D SG CYS 365 D CYS 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf11 D SG CYS 335 D CYS 335 1_555 D SG CYS 345 D CYS 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf12 D SG CYS 382 D CYS 382 1_555 D SG CYS 416 D CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf13 D SG CYS 398 D CYS 398 1_555 D SG CYS 462 D CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf14 D SG CYS 411 D CYS 411 1_555 D SG CYS 472 D CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf15 D SG CYS 442 D CYS 442 1_555 D SG CYS 452 D CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
covale ? covale1 C ND2 ASN 184 C ASN 184 1_555 G C1 NAG . C NAG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.475 ? 
covale ? covale2 C ND2 ASN 241 C ASN 241 1_555 H C1 NAG . C NAG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.527 ? 
covale ? covale3 D ND2 ASN 320 D ASN 320 1_555 K C1 NAG . D NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? 
metalc ? metalc1 A NE2 HIS 88 A HIS 87 1_555 E FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc2 B NE2 HIS 93 B HIS 92 1_555 F FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc3 D OD2 ASP 186 D ASP 186 1_555 I CA CA . D CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc4 D OD1 ASP 224 D ASP 224 1_555 I CA CA . D CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
metalc ? metalc5 D OD2 ASP 224 D ASP 224 1_555 I CA CA . D CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc6 D OD1 ASP 225 D ASP 225 1_555 I CA CA . D CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? 
metalc ? metalc7 D OD1 ASN 247 D ASN 247 1_555 I CA CA . D CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc8 D O GLY 294 D GLY 294 1_555 J CA CA . D CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc9 D OD2 ASP 296 D ASP 296 1_555 J CA CA . D CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.062 ? 
metalc ? metalc10 D OD2 ASP 299 D ASP 299 1_555 J CA CA . D CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc11 D O VAL 333 D VAL 333 1_555 J CA CA . D CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     9FHB 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 HEM A 1 201 142 HEM HEM . 
F 5 HEM B 1 201 147 HEM HEM . 
G 6 NAG C 1 1001 1001 NAG NAG . 
H 6 NAG C 1 1002 1002 NAG NAG . 
I 7 CA D 1 2001 2001 CA CA . 
J 7 CA D 1 2002 2002 CA CA . 
K 6 NAG D 1 2003 3001 NAG NAG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . F 5 159.265 150.536 135.497 1 65.18 ? CHA HEM 201 B 1 
HETATM 2 C CHB HEM . . . F 5 161.872 150.542 139.563 1 65.18 ? CHB HEM 201 B 1 
HETATM 3 C CHC HEM . . . F 5 162.974 155.184 138.84 1 65.18 ? CHC HEM 201 B 1 
HETATM 4 C CHD HEM . . . F 5 160.908 154.972 134.484 1 65.18 ? CHD HEM 201 B 1 
HETATM 5 C C1A HEM . . . F 5 159.747 150.195 136.737 1 65.18 ? C1A HEM 201 B 1 
HETATM 6 C C2A HEM . . . F 5 159.282 149.107 137.569 1 65.18 ? C2A HEM 201 B 1 
HETATM 7 C C3A HEM . . . F 5 160.001 149.11 138.688 1 65.18 ? C3A HEM 201 B 1 
HETATM 8 C C4A HEM . . . F 5 160.945 150.2 138.61 1 65.18 ? C4A HEM 201 B 1 
HETATM 9 C CMA HEM . . . F 5 159.848 148.122 139.862 1 65.18 ? CMA HEM 201 B 1 
HETATM 10 C CAA HEM . . . F 5 158.158 148.111 137.224 1 65.18 ? CAA HEM 201 B 1 
HETATM 11 C CBA HEM . . . F 5 158.735 147.005 136.347 1 65.18 ? CBA HEM 201 B 1 
HETATM 12 C CGA HEM . . . F 5 157.709 145.922 136.149 1 65.18 ? CGA HEM 201 B 1 
HETATM 13 O O1A HEM . . . F 5 158.04 144.897 135.502 1 65.18 ? O1A HEM 201 B 1 
HETATM 14 O O2A HEM . . . F 5 156.561 146.081 136.638 1 65.18 ? O2A HEM 201 B 1 
HETATM 15 C C1B HEM . . . F 5 162.478 151.768 139.671 1 65.18 ? C1B HEM 201 B 1 
HETATM 16 C C2B HEM . . . F 5 163.549 152.111 140.579 1 65.18 ? C2B HEM 201 B 1 
HETATM 17 C C3B HEM . . . F 5 163.863 153.392 140.394 1 65.18 ? C3B HEM 201 B 1 
HETATM 18 C C4B HEM . . . F 5 162.996 153.91 139.35 1 65.18 ? C4B HEM 201 B 1 
HETATM 19 C CMB HEM . . . F 5 164.216 151.161 141.594 1 65.18 ? CMB HEM 201 B 1 
HETATM 20 C CAB HEM . . . F 5 164.968 154.13 141.185 1 65.18 ? CAB HEM 201 B 1 
HETATM 21 C CBB HEM . . . F 5 165.244 155.428 141.02 1 65.18 ? CBB HEM 201 B 1 
HETATM 22 C C1C HEM . . . F 5 162.554 155.52 137.58 1 65.18 ? C1C HEM 201 B 1 
HETATM 23 C C2C HEM . . . F 5 162.821 156.773 136.915 1 65.18 ? C2C HEM 201 B 1 
HETATM 24 C C3C HEM . . . F 5 162.241 156.722 135.705 1 65.18 ? C3C HEM 201 B 1 
HETATM 25 C C4C HEM . . . F 5 161.607 155.427 135.578 1 65.18 ? C4C HEM 201 B 1 
HETATM 26 C CMC HEM . . . F 5 163.626 157.918 137.567 1 65.18 ? CMC HEM 201 B 1 
HETATM 27 C CAC HEM . . . F 5 162.215 157.779 134.575 1 65.18 ? CAC HEM 201 B 1 
HETATM 28 C CBC HEM . . . F 5 162.956 158.891 134.578 1 65.18 ? CBC HEM 201 B 1 
HETATM 29 C C1D HEM . . . F 5 160.165 153.816 134.449 1 65.18 ? C1D HEM 201 B 1 
HETATM 30 C C2D HEM . . . F 5 159.054 153.535 133.563 1 65.18 ? C2D HEM 201 B 1 
HETATM 31 C C3D HEM . . . F 5 158.603 152.31 133.841 1 65.18 ? C3D HEM 201 B 1 
HETATM 32 C C4D HEM . . . F 5 159.412 151.772 134.914 1 65.18 ? C4D HEM 201 B 1 
HETATM 33 C CMD HEM . . . F 5 158.497 154.493 132.488 1 65.18 ? CMD HEM 201 B 1 
HETATM 34 C CAD HEM . . . F 5 157.422 151.58 133.164 1 65.18 ? CAD HEM 201 B 1 
HETATM 35 C CBD HEM . . . F 5 157.775 151.125 131.753 1 65.18 ? CBD HEM 201 B 1 
HETATM 36 C CGD HEM . . . F 5 156.621 150.32 131.217 1 65.18 ? CGD HEM 201 B 1 
HETATM 37 O O1D HEM . . . F 5 156.668 149.917 130.028 1 65.18 ? O1D HEM 201 B 1 
HETATM 38 O O2D HEM . . . F 5 155.653 150.082 131.984 1 65.18 ? O2D HEM 201 B 1 
HETATM 39 N NA HEM . . . F 5 160.762 150.844 137.405 1 65.18 ? NA HEM 201 B 1 
HETATM 40 N NB HEM . . . F 5 162.164 152.89 138.934 1 65.18 ? NB HEM 201 B 1 
HETATM 41 N NC HEM . . . F 5 161.815 154.719 136.74 1 65.18 ? NC HEM 201 B 1 
HETATM 42 N ND HEM . . . F 5 160.354 152.718 135.263 1 65.18 ? ND HEM 201 B 1 
HETATM 43 FE FE HEM . . . F 5 161.207 152.815 137.12 1 65.18 ? FE HEM 201 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           43 
#