data_9FKX # _model_server_result.job_id tfY-GW-vKzuHz3NCxHmdtA _model_server_result.datetime_utc '2024-11-04 23:07:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fkx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 9FKX # _exptl.entry_id 9FKX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 604.523 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4~{S})-1-[(~{R})-[2-[(~{S})-[4,4-bis(fluoranyl)cyclohexyl]-[[5-[1,1-bis(fluoranyl)ethyl]-1,3,4-oxadiazol-2-yl]amino]methyl]imidazo[1,2-b]pyridazin-7-yl]-cyclopropyl-methyl]-4-(trifluoromethyl)imidazolidin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FKX _cell.length_a 64.55 _cell.length_b 85.049 _cell.length_c 119.483 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FKX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 62 A CYS 94 1_555 A SG CYS 112 A CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf2 A SG CYS 67 A CYS 99 1_555 A SG CYS 114 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 B SG CYS 62 B CYS 94 1_555 B SG CYS 112 B CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf4 B SG CYS 67 B CYS 99 1_555 B SG CYS 114 B CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C25 H27 F7 N8 O2' _chem_comp.formula_weight 604.523 _chem_comp.id A1IDT _chem_comp.mon_nstd_flag . _chem_comp.name (4~{S})-1-[(~{R})-[2-[(~{S})-[4,4-bis(fluoranyl)cyclohexyl]-[[5-[1,1-bis(fluoranyl)ethyl]-1,3,4-oxadiazol-2-yl]amino]methyl]imidazo[1,2-b]pyridazin-7-yl]-cyclopropyl-methyl]-4-(trifluoromethyl)imidazolidin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C6 A1IDT sing 1 n y C1 N2 A1IDT sing 2 n y C1 N18 A1IDT doub 3 n y N2 N3 A1IDT sing 4 n y N2 C20 A1IDT sing 5 n y N3 C4 A1IDT doub 6 n y C4 C5 A1IDT sing 7 n y C5 C6 A1IDT doub 8 n y C5 C7 A1IDT sing 9 n n C7 N8 A1IDT sing 10 n n C7 C23 A1IDT sing 11 n n N8 C9 A1IDT sing 12 n n N8 C12 A1IDT sing 13 n n C9 C10 A1IDT sing 14 n n C10 N11 A1IDT sing 15 n n C10 C14 A1IDT sing 16 n n N11 C12 A1IDT sing 17 n n C12 O13 A1IDT doub 18 n n C14 F15 A1IDT sing 19 n n C14 F16 A1IDT sing 20 n n C14 F17 A1IDT sing 21 n n N18 C19 A1IDT sing 22 n y C19 C20 A1IDT doub 23 n y C19 C21 A1IDT sing 24 n n C21 N22 A1IDT sing 25 n n C21 C26 A1IDT sing 26 n n N22 C34 A1IDT sing 27 n n C23 C24 A1IDT sing 28 n n C23 C25 A1IDT sing 29 n n C24 C25 A1IDT sing 30 n n C26 C27 A1IDT sing 31 n n C26 C31 A1IDT sing 32 n n C27 C28 A1IDT sing 33 n n C28 C29 A1IDT sing 34 n n C29 C30 A1IDT sing 35 n n C29 F32 A1IDT sing 36 n n C29 F33 A1IDT sing 37 n n C30 C31 A1IDT sing 38 n n C34 O35 A1IDT sing 39 n y C34 N38 A1IDT doub 40 n y O35 C36 A1IDT sing 41 n y C36 N37 A1IDT doub 42 n y C36 C39 A1IDT sing 43 n n N37 N38 A1IDT sing 44 n y C39 C40 A1IDT sing 45 n n C39 F41 A1IDT sing 46 n n C39 F42 A1IDT sing 47 n n C20 H1 A1IDT sing 48 n n C21 H2 A1IDT sing 49 n n C23 H3 A1IDT sing 50 n n C24 H4 A1IDT sing 51 n n C24 H5 A1IDT sing 52 n n C25 H6 A1IDT sing 53 n n C25 H7 A1IDT sing 54 n n C26 H8 A1IDT sing 55 n n C27 H9 A1IDT sing 56 n n C27 H10 A1IDT sing 57 n n C28 H11 A1IDT sing 58 n n C28 H12 A1IDT sing 59 n n C30 H13 A1IDT sing 60 n n C30 H14 A1IDT sing 61 n n C4 H15 A1IDT sing 62 n n C6 H16 A1IDT sing 63 n n C7 H17 A1IDT sing 64 n n C9 H18 A1IDT sing 65 n n C9 H19 A1IDT sing 66 n n C10 H20 A1IDT sing 67 n n N11 H21 A1IDT sing 68 n n N22 H22 A1IDT sing 69 n n C31 H23 A1IDT sing 70 n n C31 H24 A1IDT sing 71 n n C40 H25 A1IDT sing 72 n n C40 H26 A1IDT sing 73 n n C40 H27 A1IDT sing 74 n n # _atom_sites.entry_id 9FKX _atom_sites.fract_transf_matrix[1][1] 0.015492 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011758 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1IDT A 1 201 201 A1IDT LI1 . D 3 HOH A 1 301 6 HOH HOH . D 3 HOH A 2 302 8 HOH HOH . D 3 HOH A 3 303 19 HOH HOH . D 3 HOH A 4 304 16 HOH HOH . D 3 HOH A 5 305 15 HOH HOH . D 3 HOH A 6 306 18 HOH HOH . D 3 HOH A 7 307 17 HOH HOH . D 3 HOH A 8 308 47 HOH HOH . D 3 HOH A 9 309 9 HOH HOH . D 3 HOH A 10 310 53 HOH HOH . D 3 HOH A 11 311 4 HOH HOH . D 3 HOH A 12 312 5 HOH HOH . D 3 HOH A 13 313 32 HOH HOH . D 3 HOH A 14 314 2 HOH HOH . D 3 HOH A 15 315 25 HOH HOH . D 3 HOH A 16 316 7 HOH HOH . D 3 HOH A 17 317 10 HOH HOH . D 3 HOH A 18 318 23 HOH HOH . D 3 HOH A 19 319 49 HOH HOH . D 3 HOH A 20 320 21 HOH HOH . D 3 HOH A 21 321 51 HOH HOH . D 3 HOH A 22 322 55 HOH HOH . D 3 HOH A 23 323 20 HOH HOH . D 3 HOH A 24 324 52 HOH HOH . D 3 HOH A 25 325 59 HOH HOH . D 3 HOH A 26 326 30 HOH HOH . D 3 HOH A 27 327 24 HOH HOH . D 3 HOH A 28 328 27 HOH HOH . D 3 HOH A 29 329 13 HOH HOH . D 3 HOH A 30 330 39 HOH HOH . D 3 HOH A 31 331 43 HOH HOH . D 3 HOH A 32 332 33 HOH HOH . D 3 HOH A 33 333 42 HOH HOH . D 3 HOH A 34 334 44 HOH HOH . D 3 HOH A 35 335 22 HOH HOH . E 3 HOH B 1 201 38 HOH HOH . E 3 HOH B 2 202 35 HOH HOH . E 3 HOH B 3 203 34 HOH HOH . E 3 HOH B 4 204 56 HOH HOH . E 3 HOH B 5 205 3 HOH HOH . E 3 HOH B 6 206 50 HOH HOH . E 3 HOH B 7 207 12 HOH HOH . E 3 HOH B 8 208 14 HOH HOH . E 3 HOH B 9 209 37 HOH HOH . E 3 HOH B 10 210 36 HOH HOH . E 3 HOH B 11 211 40 HOH HOH . E 3 HOH B 12 212 1 HOH HOH . E 3 HOH B 13 213 58 HOH HOH . E 3 HOH B 14 214 48 HOH HOH . E 3 HOH B 15 215 41 HOH HOH . E 3 HOH B 16 216 11 HOH HOH . E 3 HOH B 17 217 28 HOH HOH . E 3 HOH B 18 218 54 HOH HOH . E 3 HOH B 19 219 26 HOH HOH . E 3 HOH B 20 220 45 HOH HOH . E 3 HOH B 21 221 31 HOH HOH . E 3 HOH B 22 222 46 HOH HOH . E 3 HOH B 23 223 29 HOH HOH . E 3 HOH B 24 224 57 HOH HOH . E 3 HOH B 25 225 61 HOH HOH . E 3 HOH B 26 226 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1IDT . . . C 2 -17.269 -11.873 -17.508 1 55.29 ? C1 A1IDT 201 A 1 HETATM 2 C C12 A1IDT . . . C 2 -21.582 -8.684 -16.358 1 58.26 ? C12 A1IDT 201 A 1 HETATM 3 C C14 A1IDT . . . C 2 -20.937 -10.316 -13.565 1 61.08 ? C14 A1IDT 201 A 1 HETATM 4 C C19 A1IDT . . . C 2 -15.249 -12.601 -17.102 1 54.78 ? C19 A1IDT 201 A 1 HETATM 5 C C20 A1IDT . . . C 2 -15.355 -11.293 -16.798 1 54.95 ? C20 A1IDT 201 A 1 HETATM 6 C C21 A1IDT . . . C 2 -14.059 -13.515 -17.044 1 56.02 ? C21 A1IDT 201 A 1 HETATM 7 C C23 A1IDT . . . C 2 -21.347 -11.149 -19.025 1 57.21 ? C23 A1IDT 201 A 1 HETATM 8 C C24 A1IDT . . . C 2 -22.276 -10.624 -20.142 1 57.56 ? C24 A1IDT 201 A 1 HETATM 9 C C25 A1IDT . . . C 2 -20.942 -11.329 -20.507 1 57.2 ? C25 A1IDT 201 A 1 HETATM 10 C C26 A1IDT . . . C 2 -13.311 -13.576 -18.411 1 55.88 ? C26 A1IDT 201 A 1 HETATM 11 C C27 A1IDT . . . C 2 -12.077 -14.518 -18.302 1 56.13 ? C27 A1IDT 201 A 1 HETATM 12 C C28 A1IDT . . . C 2 -11.39 -14.622 -19.69 1 56.62 ? C28 A1IDT 201 A 1 HETATM 13 C C29 A1IDT . . . C 2 -10.949 -13.207 -20.148 1 57.44 ? C29 A1IDT 201 A 1 HETATM 14 C C30 A1IDT . . . C 2 -12.141 -12.24 -20.282 1 56.51 ? C30 A1IDT 201 A 1 HETATM 15 N N2 A1IDT . . . C 2 -16.576 -10.881 -17.034 1 55.73 ? N2 A1IDT 201 A 1 HETATM 16 N N3 A1IDT . . . C 2 -17.093 -9.633 -16.886 1 56.33 ? N3 A1IDT 201 A 1 HETATM 17 C C4 A1IDT . . . C 2 -18.274 -9.365 -17.284 1 56.45 ? C4 A1IDT 201 A 1 HETATM 18 C C5 A1IDT . . . C 2 -19.164 -10.431 -17.826 1 56.38 ? C5 A1IDT 201 A 1 HETATM 19 C C6 A1IDT . . . C 2 -18.675 -11.685 -17.886 1 55.22 ? C6 A1IDT 201 A 1 HETATM 20 C C7 A1IDT . . . C 2 -20.614 -10.091 -18.153 1 57.28 ? C7 A1IDT 201 A 1 HETATM 21 N N8 A1IDT . . . C 2 -21.26 -9.888 -16.846 1 58.12 ? N8 A1IDT 201 A 1 HETATM 22 C C9 A1IDT . . . C 2 -21.521 -10.959 -15.906 1 58.5 ? C9 A1IDT 201 A 1 HETATM 23 C C10 A1IDT . . . C 2 -22.03 -10.19 -14.661 1 59.45 ? C10 A1IDT 201 A 1 HETATM 24 N N11 A1IDT . . . C 2 -22.064 -8.826 -15.128 1 58.23 ? N11 A1IDT 201 A 1 HETATM 25 O O13 A1IDT . . . C 2 -21.452 -7.606 -16.922 1 58.51 ? O13 A1IDT 201 A 1 HETATM 26 F F15 A1IDT . . . C 2 -21.017 -11.559 -13.073 1 61.25 ? F15 A1IDT 201 A 1 HETATM 27 F F16 A1IDT . . . C 2 -19.677 -10.18 -14.043 1 61.95 ? F16 A1IDT 201 A 1 HETATM 28 F F17 A1IDT . . . C 2 -21.076 -9.404 -12.576 1 61.84 ? F17 A1IDT 201 A 1 HETATM 29 N N18 A1IDT . . . C 2 -16.55 -12.9 -17.599 1 54.63 ? N18 A1IDT 201 A 1 HETATM 30 N N22 A1IDT . . . C 2 -14.552 -14.845 -16.695 1 57.46 ? N22 A1IDT 201 A 1 HETATM 31 C C31 A1IDT . . . C 2 -12.946 -12.166 -18.958 1 55.85 ? C31 A1IDT 201 A 1 HETATM 32 F F32 A1IDT . . . C 2 -10.035 -12.692 -19.279 1 57.98 ? F32 A1IDT 201 A 1 HETATM 33 F F33 A1IDT . . . C 2 -10.361 -13.303 -21.357 1 58.59 ? F33 A1IDT 201 A 1 HETATM 34 C C34 A1IDT . . . C 2 -14.382 -15.315 -15.501 1 60.12 ? C34 A1IDT 201 A 1 HETATM 35 O O35 A1IDT . . . C 2 -14.846 -16.517 -15.156 1 61.91 ? O35 A1IDT 201 A 1 HETATM 36 C C36 A1IDT . . . C 2 -14.497 -16.584 -13.877 1 63.65 ? C36 A1IDT 201 A 1 HETATM 37 N N37 A1IDT . . . C 2 -13.829 -15.593 -13.466 1 62.36 ? N37 A1IDT 201 A 1 HETATM 38 N N38 A1IDT . . . C 2 -13.792 -14.7 -14.551 1 60.81 ? N38 A1IDT 201 A 1 HETATM 39 C C39 A1IDT . . . C 2 -14.854 -17.824 -13.1 1 67.06 ? C39 A1IDT 201 A 1 HETATM 40 C C40 A1IDT . . . C 2 -14.303 -17.834 -11.647 1 67.05 ? C40 A1IDT 201 A 1 HETATM 41 F F41 A1IDT . . . C 2 -16.206 -17.948 -13.051 1 67.99 ? F41 A1IDT 201 A 1 HETATM 42 F F42 A1IDT . . . C 2 -14.379 -18.877 -13.822 1 68.95 ? F42 A1IDT 201 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 42 #