data_9FLQ # _model_server_result.job_id IRQiafTT01Dx3rR6e5Dp_A _model_server_result.datetime_utc '2024-11-22 17:04:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9flq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":809}' # _entry.id 9FLQ # _exptl.entry_id 9FLQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FLQ _cell.length_a 68.59 _cell.length_b 77.993 _cell.length_c 87.098 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FLQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 36 A HIS 477 1_555 K NI NI . A NI 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc2 A O GLU 113 A GLU 554 1_555 D NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc3 A O PHE 115 A PHE 556 1_555 D NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc4 A NE2 HIS 122 A HIS 563 1_555 K NI NI . A NI 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc5 A OG SER 243 A SER 684 1_555 D NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc6 D NA NA . A NA 803 1_555 L O HOH . A HOH 928 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc7 D NA NA . A NA 803 1_555 L O HOH . A HOH 1085 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc8 E NA NA . A NA 804 1_555 L O HOH . A HOH 924 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.047 ? metalc ? metalc9 E NA NA . A NA 804 1_555 L O HOH . A HOH 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? metalc ? metalc10 E NA NA . A NA 804 1_555 L O HOH . A HOH 1017 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 311 n n C1 H11 MPD sing 312 n n C1 H12 MPD sing 313 n n C1 H13 MPD sing 314 n n C2 O2 MPD sing 315 n n C2 CM MPD sing 316 n n C2 C3 MPD sing 317 n n O2 HO2 MPD sing 318 n n CM HM1 MPD sing 319 n n CM HM2 MPD sing 320 n n CM HM3 MPD sing 321 n n C3 C4 MPD sing 322 n n C3 H31 MPD sing 323 n n C3 H32 MPD sing 324 n n C4 O4 MPD sing 325 n n C4 C5 MPD sing 326 n n C4 H4 MPD sing 327 n n O4 HO4 MPD sing 328 n n C5 H51 MPD sing 329 n n C5 H52 MPD sing 330 n n C5 H53 MPD sing 331 n n # _atom_sites.entry_id 9FLQ _atom_sites.fract_transf_matrix[1][1] 0.014579 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012822 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE A 1 801 801 EPE EPE . C 3 MPD A 1 802 802 MPD MPD . D 4 NA A 1 803 1 NA NA . E 4 NA A 1 804 2 NA NA . F 3 MPD A 1 805 801 MPD MPD . G 5 A1IDD A 1 806 807 A1IDD M59 . H 3 MPD A 1 807 808 MPD MPD . I 3 MPD A 1 808 809 MPD MPD . J 3 MPD A 1 809 810 MPD MPD . K 6 NI A 1 810 1 NI NI . L 7 HOH A 1 901 136 HOH HOH . L 7 HOH A 2 902 163 HOH HOH . L 7 HOH A 3 903 146 HOH HOH . L 7 HOH A 4 904 150 HOH HOH . L 7 HOH A 5 905 63 HOH HOH . L 7 HOH A 6 906 141 HOH HOH . L 7 HOH A 7 907 61 HOH HOH . L 7 HOH A 8 908 231 HOH HOH . L 7 HOH A 9 909 3 HOH HOH . L 7 HOH A 10 910 229 HOH HOH . L 7 HOH A 11 911 7 HOH HOH . L 7 HOH A 12 912 114 HOH HOH . L 7 HOH A 13 913 155 HOH HOH . L 7 HOH A 14 914 32 HOH HOH . L 7 HOH A 15 915 228 HOH HOH . L 7 HOH A 16 916 130 HOH HOH . L 7 HOH A 17 917 187 HOH HOH . L 7 HOH A 18 918 224 HOH HOH . L 7 HOH A 19 919 36 HOH HOH . L 7 HOH A 20 920 33 HOH HOH . L 7 HOH A 21 921 38 HOH HOH . L 7 HOH A 22 922 123 HOH HOH . L 7 HOH A 23 923 184 HOH HOH . L 7 HOH A 24 924 26 HOH HOH . L 7 HOH A 25 925 233 HOH HOH . L 7 HOH A 26 926 20 HOH HOH . L 7 HOH A 27 927 25 HOH HOH . L 7 HOH A 28 928 220 HOH HOH . L 7 HOH A 29 929 142 HOH HOH . L 7 HOH A 30 930 182 HOH HOH . L 7 HOH A 31 931 100 HOH HOH . L 7 HOH A 32 932 41 HOH HOH . L 7 HOH A 33 933 13 HOH HOH . L 7 HOH A 34 934 170 HOH HOH . L 7 HOH A 35 935 168 HOH HOH . L 7 HOH A 36 936 67 HOH HOH . L 7 HOH A 37 937 49 HOH HOH . L 7 HOH A 38 938 101 HOH HOH . L 7 HOH A 39 939 88 HOH HOH . L 7 HOH A 40 940 86 HOH HOH . L 7 HOH A 41 941 82 HOH HOH . L 7 HOH A 42 942 55 HOH HOH . L 7 HOH A 43 943 126 HOH HOH . L 7 HOH A 44 944 65 HOH HOH . L 7 HOH A 45 945 107 HOH HOH . L 7 HOH A 46 946 46 HOH HOH . L 7 HOH A 47 947 159 HOH HOH . L 7 HOH A 48 948 188 HOH HOH . L 7 HOH A 49 949 56 HOH HOH . L 7 HOH A 50 950 1 HOH HOH . L 7 HOH A 51 951 75 HOH HOH . L 7 HOH A 52 952 53 HOH HOH . L 7 HOH A 53 953 206 HOH HOH . L 7 HOH A 54 954 98 HOH HOH . L 7 HOH A 55 955 195 HOH HOH . L 7 HOH A 56 956 51 HOH HOH . L 7 HOH A 57 957 4 HOH HOH . L 7 HOH A 58 958 43 HOH HOH . L 7 HOH A 59 959 15 HOH HOH . L 7 HOH A 60 960 6 HOH HOH . L 7 HOH A 61 961 60 HOH HOH . L 7 HOH A 62 962 24 HOH HOH . L 7 HOH A 63 963 222 HOH HOH . L 7 HOH A 64 964 127 HOH HOH . L 7 HOH A 65 965 227 HOH HOH . L 7 HOH A 66 966 117 HOH HOH . L 7 HOH A 67 967 179 HOH HOH . L 7 HOH A 68 968 54 HOH HOH . L 7 HOH A 69 969 30 HOH HOH . L 7 HOH A 70 970 96 HOH HOH . L 7 HOH A 71 971 171 HOH HOH . L 7 HOH A 72 972 158 HOH HOH . L 7 HOH A 73 973 14 HOH HOH . L 7 HOH A 74 974 116 HOH HOH . L 7 HOH A 75 975 47 HOH HOH . L 7 HOH A 76 976 62 HOH HOH . L 7 HOH A 77 977 37 HOH HOH . L 7 HOH A 78 978 29 HOH HOH . L 7 HOH A 79 979 147 HOH HOH . L 7 HOH A 80 980 178 HOH HOH . L 7 HOH A 81 981 76 HOH HOH . L 7 HOH A 82 982 12 HOH HOH . L 7 HOH A 83 983 99 HOH HOH . L 7 HOH A 84 984 87 HOH HOH . L 7 HOH A 85 985 115 HOH HOH . L 7 HOH A 86 986 124 HOH HOH . L 7 HOH A 87 987 17 HOH HOH . L 7 HOH A 88 988 181 HOH HOH . L 7 HOH A 89 989 40 HOH HOH . L 7 HOH A 90 990 22 HOH HOH . L 7 HOH A 91 991 164 HOH HOH . L 7 HOH A 92 992 73 HOH HOH . L 7 HOH A 93 993 210 HOH HOH . L 7 HOH A 94 994 35 HOH HOH . L 7 HOH A 95 995 199 HOH HOH . L 7 HOH A 96 996 97 HOH HOH . L 7 HOH A 97 997 50 HOH HOH . L 7 HOH A 98 998 59 HOH HOH . L 7 HOH A 99 999 167 HOH HOH . L 7 HOH A 100 1000 78 HOH HOH . L 7 HOH A 101 1001 110 HOH HOH . L 7 HOH A 102 1002 79 HOH HOH . L 7 HOH A 103 1003 9 HOH HOH . L 7 HOH A 104 1004 18 HOH HOH . L 7 HOH A 105 1005 204 HOH HOH . L 7 HOH A 106 1006 34 HOH HOH . L 7 HOH A 107 1007 16 HOH HOH . L 7 HOH A 108 1008 119 HOH HOH . L 7 HOH A 109 1009 84 HOH HOH . L 7 HOH A 110 1010 106 HOH HOH . L 7 HOH A 111 1011 176 HOH HOH . L 7 HOH A 112 1012 128 HOH HOH . L 7 HOH A 113 1013 69 HOH HOH . L 7 HOH A 114 1014 23 HOH HOH . L 7 HOH A 115 1015 169 HOH HOH . L 7 HOH A 116 1016 186 HOH HOH . L 7 HOH A 117 1017 11 HOH HOH . L 7 HOH A 118 1018 72 HOH HOH . L 7 HOH A 119 1019 148 HOH HOH . L 7 HOH A 120 1020 153 HOH HOH . L 7 HOH A 121 1021 129 HOH HOH . L 7 HOH A 122 1022 92 HOH HOH . L 7 HOH A 123 1023 66 HOH HOH . L 7 HOH A 124 1024 202 HOH HOH . L 7 HOH A 125 1025 44 HOH HOH . L 7 HOH A 126 1026 5 HOH HOH . L 7 HOH A 127 1027 196 HOH HOH . L 7 HOH A 128 1028 57 HOH HOH . L 7 HOH A 129 1029 154 HOH HOH . L 7 HOH A 130 1030 113 HOH HOH . L 7 HOH A 131 1031 197 HOH HOH . L 7 HOH A 132 1032 28 HOH HOH . L 7 HOH A 133 1033 205 HOH HOH . L 7 HOH A 134 1034 52 HOH HOH . L 7 HOH A 135 1035 108 HOH HOH . L 7 HOH A 136 1036 48 HOH HOH . L 7 HOH A 137 1037 74 HOH HOH . L 7 HOH A 138 1038 85 HOH HOH . L 7 HOH A 139 1039 194 HOH HOH . L 7 HOH A 140 1040 160 HOH HOH . L 7 HOH A 141 1041 95 HOH HOH . L 7 HOH A 142 1042 103 HOH HOH . L 7 HOH A 143 1043 31 HOH HOH . L 7 HOH A 144 1044 143 HOH HOH . L 7 HOH A 145 1045 112 HOH HOH . L 7 HOH A 146 1046 151 HOH HOH . L 7 HOH A 147 1047 125 HOH HOH . L 7 HOH A 148 1048 45 HOH HOH . L 7 HOH A 149 1049 71 HOH HOH . L 7 HOH A 150 1050 177 HOH HOH . L 7 HOH A 151 1051 118 HOH HOH . L 7 HOH A 152 1052 80 HOH HOH . L 7 HOH A 153 1053 21 HOH HOH . L 7 HOH A 154 1054 2 HOH HOH . L 7 HOH A 155 1055 1 HOH HOH . L 7 HOH A 156 1056 111 HOH HOH . L 7 HOH A 157 1057 157 HOH HOH . L 7 HOH A 158 1058 166 HOH HOH . L 7 HOH A 159 1059 144 HOH HOH . L 7 HOH A 160 1060 190 HOH HOH . L 7 HOH A 161 1061 152 HOH HOH . L 7 HOH A 162 1062 120 HOH HOH . L 7 HOH A 163 1063 19 HOH HOH . L 7 HOH A 164 1064 232 HOH HOH . L 7 HOH A 165 1065 138 HOH HOH . L 7 HOH A 166 1066 201 HOH HOH . L 7 HOH A 167 1067 207 HOH HOH . L 7 HOH A 168 1068 211 HOH HOH . L 7 HOH A 169 1069 90 HOH HOH . L 7 HOH A 170 1070 10 HOH HOH . L 7 HOH A 171 1071 192 HOH HOH . L 7 HOH A 172 1072 8 HOH HOH . L 7 HOH A 173 1073 58 HOH HOH . L 7 HOH A 174 1074 64 HOH HOH . L 7 HOH A 175 1075 94 HOH HOH . L 7 HOH A 176 1076 215 HOH HOH . L 7 HOH A 177 1077 149 HOH HOH . L 7 HOH A 178 1078 93 HOH HOH . L 7 HOH A 179 1079 156 HOH HOH . L 7 HOH A 180 1080 135 HOH HOH . L 7 HOH A 181 1081 183 HOH HOH . L 7 HOH A 182 1082 193 HOH HOH . L 7 HOH A 183 1083 42 HOH HOH . L 7 HOH A 184 1084 175 HOH HOH . L 7 HOH A 185 1085 91 HOH HOH . L 7 HOH A 186 1086 83 HOH HOH . L 7 HOH A 187 1087 68 HOH HOH . L 7 HOH A 188 1088 105 HOH HOH . L 7 HOH A 189 1089 165 HOH HOH . L 7 HOH A 190 1090 218 HOH HOH . L 7 HOH A 191 1091 189 HOH HOH . L 7 HOH A 192 1092 131 HOH HOH . L 7 HOH A 193 1093 81 HOH HOH . L 7 HOH A 194 1094 221 HOH HOH . L 7 HOH A 195 1095 70 HOH HOH . L 7 HOH A 196 1096 122 HOH HOH . L 7 HOH A 197 1097 234 HOH HOH . L 7 HOH A 198 1098 213 HOH HOH . L 7 HOH A 199 1099 27 HOH HOH . L 7 HOH A 200 1100 230 HOH HOH . L 7 HOH A 201 1101 133 HOH HOH . L 7 HOH A 202 1102 161 HOH HOH . L 7 HOH A 203 1103 225 HOH HOH . L 7 HOH A 204 1104 203 HOH HOH . L 7 HOH A 205 1105 104 HOH HOH . L 7 HOH A 206 1106 174 HOH HOH . L 7 HOH A 207 1107 212 HOH HOH . L 7 HOH A 208 1108 109 HOH HOH . L 7 HOH A 209 1109 102 HOH HOH . L 7 HOH A 210 1110 198 HOH HOH . L 7 HOH A 211 1111 217 HOH HOH . L 7 HOH A 212 1112 191 HOH HOH . L 7 HOH A 213 1113 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . J 3 12.919 -14.846 -1.641 1 80.64 ? C1 MPD 809 A 1 HETATM 2 C C2 MPD . . . J 3 13.222 -14.283 -3.021 1 81.58 ? C2 MPD 809 A 1 HETATM 3 O O2 MPD . . . J 3 14.146 -13.195 -2.836 1 79.83 ? O2 MPD 809 A 1 HETATM 4 C CM MPD . . . J 3 11.951 -13.758 -3.674 1 75.8 ? CM MPD 809 A 1 HETATM 5 C C3 MPD . . . J 3 13.936 -15.309 -3.911 1 80.81 ? C3 MPD 809 A 1 HETATM 6 C C4 MPD . . . J 3 14.855 -14.711 -4.965 1 75.81 ? C4 MPD 809 A 1 HETATM 7 O O4 MPD . . . J 3 16.012 -15.538 -5.064 1 82.47 ? O4 MPD 809 A 1 HETATM 8 C C5 MPD . . . J 3 14.259 -14.528 -6.337 1 66.27 ? C5 MPD 809 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #