data_9FQI # _model_server_result.job_id 6PvGOaCxiWFK380ZUxRxNg _model_server_result.datetime_utc '2025-07-13 18:33:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fqi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 9FQI # _exptl.entry_id 9FQI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 502.552 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-[3-[(4~{R})-4-methyl-2-oxidanylidene-piperidin-4-yl]phenyl]-3-[[(3~{S})-3-methylpiperidin-1-yl]methyl]-5-(trifluoromethyl)-1$l^{4},7,8-triazabicyclo[4.3.0]nona-1(6),2,4-trien-9-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FQI _cell.length_a 57.558 _cell.length_b 74.127 _cell.length_c 97.326 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FQI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 188 A ASP 221 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc2 A OG1 THR 190 A THR 223 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc3 A OD1 ASN 192 A ASN 225 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc4 A O TYR 194 A TYR 227 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc5 A OE1 GLU 199 A GLU 232 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc6 A OE2 GLU 199 A GLU 232 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc7 A SG CYS 340 A CYS 373 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc8 A SG CYS 343 A CYS 376 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc9 A SG CYS 355 A CYS 388 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc10 A ND1 HIS 357 A HIS 390 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc11 A SG CYS 360 A CYS 393 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc12 A SG CYS 363 A CYS 396 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc13 A SG CYS 375 A CYS 408 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc14 A SG CYS 378 A CYS 411 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc15 E NA NA . A NA 504 1_555 F O HOH . A HOH 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? # _chem_comp.formula 'C26 H31 F3 N5 O2' _chem_comp.formula_weight 502.552 _chem_comp.id A1IEV _chem_comp.mon_nstd_flag . _chem_comp.name 8-[3-[(4~{R})-4-methyl-2-oxidanylidene-piperidin-4-yl]phenyl]-3-[[(3~{S})-3-methylpiperidin-1-yl]methyl]-5-(trifluoromethyl)-1$l^{4},7,8-triazabicyclo[4.3.0]nona-1(6),2,4-trien-9-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C19 A1IEV sing 1 n n C16 C15 A1IEV doub 2 n y C16 C17 A1IEV sing 3 n y C15 C14 A1IEV sing 4 n y C19 C21 A1IEV sing 5 n n C19 C17 A1IEV sing 6 n n C19 C24 A1IEV sing 7 n n C21 C22 A1IEV sing 8 n n C17 C18 A1IEV doub 9 n y C14 C13 A1IEV doub 10 n y C24 C23 A1IEV sing 11 n n C C1 A1IEV sing 12 n n C18 C13 A1IEV sing 13 n y C13 N2 A1IEV sing 14 n n C22 N4 A1IEV sing 15 n n O C8 A1IEV doub 16 n n N2 C8 A1IEV sing 17 n n N2 N3 A1IEV sing 18 n n C23 N4 A1IEV sing 19 n n C23 O1 A1IEV doub 20 n n C8 N1 A1IEV sing 21 n n C1 C2 A1IEV sing 22 n n C1 C25 A1IEV sing 23 n n C2 C3 A1IEV sing 24 n n N3 C9 A1IEV sing 25 n n C25 N A1IEV sing 26 n n N1 C9 A1IEV doub 27 n y N1 C7 A1IEV sing 28 n y F C12 A1IEV sing 29 n n C9 C10 A1IEV sing 30 n y C7 C6 A1IEV doub 31 n y C3 C4 A1IEV sing 32 n n C10 C12 A1IEV sing 33 n n C10 C11 A1IEV doub 34 n y C12 F1 A1IEV sing 35 n n C12 F2 A1IEV sing 36 n n N C4 A1IEV sing 37 n n N C5 A1IEV sing 38 n n C6 C11 A1IEV sing 39 n y C6 C5 A1IEV sing 40 n n C1 H1 A1IEV sing 41 n n C2 H2 A1IEV sing 42 n n C2 H3 A1IEV sing 43 n n C3 H4 A1IEV sing 44 n n C3 H5 A1IEV sing 45 n n C7 H6 A1IEV sing 46 n n C11 H7 A1IEV sing 47 n n C14 H8 A1IEV sing 48 n n C15 H9 A1IEV sing 49 n n C16 H10 A1IEV sing 50 n n C20 H11 A1IEV sing 51 n n C20 H12 A1IEV sing 52 n n C20 H13 A1IEV sing 53 n n C21 H14 A1IEV sing 54 n n C21 H15 A1IEV sing 55 n n C22 H16 A1IEV sing 56 n n C22 H17 A1IEV sing 57 n n C24 H18 A1IEV sing 58 n n C24 H19 A1IEV sing 59 n n N4 H20 A1IEV sing 60 n n C18 H21 A1IEV sing 61 n n N3 H22 A1IEV sing 62 n n C5 H23 A1IEV sing 63 n n C5 H24 A1IEV sing 64 n n C4 H26 A1IEV sing 65 n n C4 H27 A1IEV sing 66 n n C25 H28 A1IEV sing 67 n n C25 H29 A1IEV sing 68 n n C H30 A1IEV sing 69 n n C H31 A1IEV sing 70 n n C H32 A1IEV sing 71 n n # _atom_sites.entry_id 9FQI _atom_sites.fract_transf_matrix[1][1] 0.017374 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01349 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1IEV A 1 501 1 A1IEV INH . C 3 ZN A 1 502 1 ZN ZN . D 3 ZN A 1 503 2 ZN ZN . E 4 NA A 1 504 4 NA NA . F 5 HOH A 1 601 50 HOH HOH . F 5 HOH A 2 602 32 HOH HOH . F 5 HOH A 3 603 61 HOH HOH . F 5 HOH A 4 604 38 HOH HOH . F 5 HOH A 5 605 76 HOH HOH . F 5 HOH A 6 606 58 HOH HOH . F 5 HOH A 7 607 91 HOH HOH . F 5 HOH A 8 608 47 HOH HOH . F 5 HOH A 9 609 52 HOH HOH . F 5 HOH A 10 610 59 HOH HOH . F 5 HOH A 11 611 63 HOH HOH . F 5 HOH A 12 612 20 HOH HOH . F 5 HOH A 13 613 17 HOH HOH . F 5 HOH A 14 614 46 HOH HOH . F 5 HOH A 15 615 60 HOH HOH . F 5 HOH A 16 616 43 HOH HOH . F 5 HOH A 17 617 25 HOH HOH . F 5 HOH A 18 618 67 HOH HOH . F 5 HOH A 19 619 40 HOH HOH . F 5 HOH A 20 620 62 HOH HOH . F 5 HOH A 21 621 92 HOH HOH . F 5 HOH A 22 622 86 HOH HOH . F 5 HOH A 23 623 8 HOH HOH . F 5 HOH A 24 624 44 HOH HOH . F 5 HOH A 25 625 31 HOH HOH . F 5 HOH A 26 626 75 HOH HOH . F 5 HOH A 27 627 84 HOH HOH . F 5 HOH A 28 628 64 HOH HOH . F 5 HOH A 29 629 26 HOH HOH . F 5 HOH A 30 630 101 HOH HOH . F 5 HOH A 31 631 13 HOH HOH . F 5 HOH A 32 632 29 HOH HOH . F 5 HOH A 33 633 99 HOH HOH . F 5 HOH A 34 634 72 HOH HOH . F 5 HOH A 35 635 7 HOH HOH . F 5 HOH A 36 636 66 HOH HOH . F 5 HOH A 37 637 51 HOH HOH . F 5 HOH A 38 638 80 HOH HOH . F 5 HOH A 39 639 89 HOH HOH . F 5 HOH A 40 640 49 HOH HOH . F 5 HOH A 41 641 79 HOH HOH . F 5 HOH A 42 642 48 HOH HOH . F 5 HOH A 43 643 35 HOH HOH . F 5 HOH A 44 644 57 HOH HOH . F 5 HOH A 45 645 55 HOH HOH . F 5 HOH A 46 646 39 HOH HOH . F 5 HOH A 47 647 4 HOH HOH . F 5 HOH A 48 648 30 HOH HOH . F 5 HOH A 49 649 33 HOH HOH . F 5 HOH A 50 650 71 HOH HOH . F 5 HOH A 51 651 42 HOH HOH . F 5 HOH A 52 652 54 HOH HOH . F 5 HOH A 53 653 22 HOH HOH . F 5 HOH A 54 654 19 HOH HOH . F 5 HOH A 55 655 87 HOH HOH . F 5 HOH A 56 656 15 HOH HOH . F 5 HOH A 57 657 65 HOH HOH . F 5 HOH A 58 658 21 HOH HOH . F 5 HOH A 59 659 53 HOH HOH . F 5 HOH A 60 660 81 HOH HOH . F 5 HOH A 61 661 41 HOH HOH . F 5 HOH A 62 662 77 HOH HOH . F 5 HOH A 63 663 88 HOH HOH . F 5 HOH A 64 664 3 HOH HOH . F 5 HOH A 65 665 12 HOH HOH . F 5 HOH A 66 666 28 HOH HOH . F 5 HOH A 67 667 10 HOH HOH . F 5 HOH A 68 668 73 HOH HOH . F 5 HOH A 69 669 18 HOH HOH . F 5 HOH A 70 670 14 HOH HOH . F 5 HOH A 71 671 16 HOH HOH . F 5 HOH A 72 672 93 HOH HOH . F 5 HOH A 73 673 85 HOH HOH . F 5 HOH A 74 674 1 HOH HOH . F 5 HOH A 75 675 9 HOH HOH . F 5 HOH A 76 676 74 HOH HOH . F 5 HOH A 77 677 78 HOH HOH . F 5 HOH A 78 678 37 HOH HOH . F 5 HOH A 79 679 23 HOH HOH . F 5 HOH A 80 680 27 HOH HOH . F 5 HOH A 81 681 5 HOH HOH . F 5 HOH A 82 682 56 HOH HOH . F 5 HOH A 83 683 6 HOH HOH . F 5 HOH A 84 684 69 HOH HOH . F 5 HOH A 85 685 2 HOH HOH . F 5 HOH A 86 686 45 HOH HOH . F 5 HOH A 87 687 100 HOH HOH . F 5 HOH A 88 688 11 HOH HOH . F 5 HOH A 89 689 34 HOH HOH . F 5 HOH A 90 690 68 HOH HOH . F 5 HOH A 91 691 82 HOH HOH . F 5 HOH A 92 692 90 HOH HOH . F 5 HOH A 93 693 24 HOH HOH . F 5 HOH A 94 694 97 HOH HOH . F 5 HOH A 95 695 83 HOH HOH . F 5 HOH A 96 696 94 HOH HOH . F 5 HOH A 97 697 95 HOH HOH . F 5 HOH A 98 698 96 HOH HOH . F 5 HOH A 99 699 98 HOH HOH . F 5 HOH A 100 700 70 HOH HOH . F 5 HOH A 101 701 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1IEV . . . B 2 19.162 26.49 35.368 1 37.38 ? C1 A1IEV 501 A 1 HETATM 2 C C2 A1IEV . . . B 2 17.673 26.784 35.434 1 37.39 ? C2 A1IEV 501 A 1 HETATM 3 C C3 A1IEV . . . B 2 17.159 26.814 36.875 1 37.63 ? C3 A1IEV 501 A 1 HETATM 4 C C7 A1IEV . . . B 2 20.021 22.169 36.809 1 33.96 ? C7 A1IEV 501 A 1 HETATM 5 C C8 A1IEV . . . B 2 20.407 20.188 35.325 1 32.94 ? C8 A1IEV 501 A 1 HETATM 6 C C9 A1IEV . . . B 2 18.431 20.374 36.388 1 33.79 ? C9 A1IEV 501 A 1 HETATM 7 C C10 A1IEV . . . B 2 17.493 21.014 37.258 1 34.89 ? C10 A1IEV 501 A 1 HETATM 8 C C11 A1IEV . . . B 2 17.867 22.174 37.836 1 34.94 ? C11 A1IEV 501 A 1 HETATM 9 C C12 A1IEV . . . B 2 16.171 20.388 37.476 1 35.96 ? C12 A1IEV 501 A 1 HETATM 10 C C13 A1IEV . . . B 2 19.787 18.004 34.193 1 31.5 ? C13 A1IEV 501 A 1 HETATM 11 C C14 A1IEV . . . B 2 18.713 17.383 33.586 1 30.99 ? C14 A1IEV 501 A 1 HETATM 12 C C15 A1IEV . . . B 2 18.925 16.289 32.768 1 31 ? C15 A1IEV 501 A 1 HETATM 13 C C16 A1IEV . . . B 2 20.203 15.819 32.548 1 30.75 ? C16 A1IEV 501 A 1 HETATM 14 C C19 A1IEV . . . B 2 22.693 15.891 32.899 1 32.2 ? C19 A1IEV 501 A 1 HETATM 15 C C20 A1IEV . . . B 2 23.011 16.19 31.43 1 32.26 ? C20 A1IEV 501 A 1 HETATM 16 C C21 A1IEV . . . B 2 22.767 14.369 33.117 1 32.05 ? C21 A1IEV 501 A 1 HETATM 17 C C22 A1IEV . . . B 2 22.437 14.005 34.548 1 32.1 ? C22 A1IEV 501 A 1 HETATM 18 C C24 A1IEV . . . B 2 23.739 16.557 33.814 1 31.61 ? C24 A1IEV 501 A 1 HETATM 19 O O1 A1IEV . . . B 2 24.682 16.422 35.995 1 31.71 ? O1 A1IEV 501 A 1 HETATM 20 C C23 A1IEV . . . B 2 23.891 15.948 35.186 1 32.12 ? C23 A1IEV 501 A 1 HETATM 21 N N4 A1IEV . . . B 2 23.146 14.886 35.487 1 31.96 ? N4 A1IEV 501 A 1 HETATM 22 C C17 A1IEV . . . B 2 21.296 16.427 33.15 1 31.59 ? C17 A1IEV 501 A 1 HETATM 23 C C18 A1IEV . . . B 2 21.078 17.529 33.977 1 31.54 ? C18 A1IEV 501 A 1 HETATM 24 N N2 A1IEV . . . B 2 19.562 19.138 35.045 1 32.79 ? N2 A1IEV 501 A 1 HETATM 25 O O A1IEV . . . B 2 21.537 20.401 34.931 1 32.97 ? O A1IEV 501 A 1 HETATM 26 N N3 A1IEV . . . B 2 18.341 19.258 35.699 1 32.6 ? N3 A1IEV 501 A 1 HETATM 27 N N1 A1IEV . . . B 2 19.663 20.974 36.193 1 33.58 ? N1 A1IEV 501 A 1 HETATM 28 F F2 A1IEV . . . B 2 15.393 21.131 38.26 1 36.59 ? F2 A1IEV 501 A 1 HETATM 29 F F1 A1IEV . . . B 2 16.265 19.184 38.063 1 37.02 ? F1 A1IEV 501 A 1 HETATM 30 F F A1IEV . . . B 2 15.508 20.215 36.35 1 35.19 ? F A1IEV 501 A 1 HETATM 31 C C6 A1IEV . . . B 2 19.143 22.787 37.629 1 34.76 ? C6 A1IEV 501 A 1 HETATM 32 C C5 A1IEV . . . B 2 19.375 24.094 38.356 1 35.55 ? C5 A1IEV 501 A 1 HETATM 33 N N A1IEV . . . B 2 19.009 25.288 37.572 1 36.04 ? N A1IEV 501 A 1 HETATM 34 C C4 A1IEV . . . B 2 17.56 25.549 37.636 1 36.73 ? C4 A1IEV 501 A 1 HETATM 35 C C25 A1IEV . . . B 2 19.455 25.209 36.168 1 36.73 ? C25 A1IEV 501 A 1 HETATM 36 C C A1IEV . . . B 2 19.664 26.374 33.928 1 37.62 ? C A1IEV 501 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #