data_9FSN # _model_server_result.job_id 3p5prfz8X7XSVJWodJDbZg _model_server_result.datetime_utc '2025-02-23 10:13:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fsn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 9FSN # _exptl.entry_id 9FSN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.333 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Enarodustat _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FSN _cell.length_a 86.45 _cell.length_b 86.45 _cell.length_c 147.22 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 200 A HIS 199 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc2 A OD2 ASP 202 A ASP 201 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc3 A NE2 HIS 280 A HIS 279 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc4 B MN MN . A MN 401 1_555 C N15 A1IF7 . A A1IF7 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc5 B MN MN . A MN 401 1_555 C O07 A1IF7 . A A1IF7 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc6 B MN MN . A MN 401 1_555 D O HOH . A HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? # _chem_comp.formula 'C17 H16 N4 O4' _chem_comp.formula_weight 340.333 _chem_comp.id A1IF7 _chem_comp.mon_nstd_flag . _chem_comp.name Enarodustat _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-[[7-oxidanylidene-5-(2-phenylethyl)-3H-[1,2,4]triazolo[1,5-a]pyridin-8-yl]carbonylamino]ethanoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 O01 A1IF7 doub 1 n n O03 C02 A1IF7 sing 2 n n C04 C02 A1IF7 sing 3 n n N05 C04 A1IF7 sing 4 n n C06 N05 A1IF7 sing 5 n n O07 C06 A1IF7 doub 6 n n C08 C06 A1IF7 sing 7 n n C09 C08 A1IF7 sing 8 n n O10 C09 A1IF7 doub 9 n n C11 C09 A1IF7 sing 10 n n C12 C11 A1IF7 doub 11 n n C14 N13 A1IF7 sing 12 n n N15 C14 A1IF7 sing 13 n n C16 N15 A1IF7 doub 14 n n N17 C16 A1IF7 sing 15 n n N13 C12 A1IF7 sing 16 n n C18 C12 A1IF7 sing 17 n n C19 C18 A1IF7 sing 18 n n C20 C19 A1IF7 sing 19 n n C21 C20 A1IF7 doub 20 n y C22 C21 A1IF7 sing 21 n y C23 C22 A1IF7 doub 22 n y C24 C23 A1IF7 sing 23 n y C25 C24 A1IF7 doub 24 n y C08 C14 A1IF7 doub 25 n n N13 N17 A1IF7 sing 26 n n C20 C25 A1IF7 sing 27 n y C16 H161 A1IF7 sing 28 n n N17 H171 A1IF7 sing 29 n n C04 H042 A1IF7 sing 30 n n C04 H041 A1IF7 sing 31 n n C11 H111 A1IF7 sing 32 n n C18 H182 A1IF7 sing 33 n n C18 H181 A1IF7 sing 34 n n C19 H191 A1IF7 sing 35 n n C19 H192 A1IF7 sing 36 n n C21 H211 A1IF7 sing 37 n n C22 H221 A1IF7 sing 38 n n C23 H231 A1IF7 sing 39 n n C24 H241 A1IF7 sing 40 n n C25 H251 A1IF7 sing 41 n n N05 H051 A1IF7 sing 42 n n O03 H1 A1IF7 sing 43 n n # _atom_sites.entry_id 9FSN _atom_sites.fract_transf_matrix[1][1] 0.011567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011567 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 401 401 MN MN . C 3 A1IF7 A 1 402 402 A1IF7 ENA . D 4 HOH A 1 501 61 HOH HOH . D 4 HOH A 2 502 63 HOH HOH . D 4 HOH A 3 503 49 HOH HOH . D 4 HOH A 4 504 12 HOH HOH . D 4 HOH A 5 505 50 HOH HOH . D 4 HOH A 6 506 11 HOH HOH . D 4 HOH A 7 507 10 HOH HOH . D 4 HOH A 8 508 3 HOH HOH . D 4 HOH A 9 509 45 HOH HOH . D 4 HOH A 10 510 8 HOH HOH . D 4 HOH A 11 511 19 HOH HOH . D 4 HOH A 12 512 23 HOH HOH . D 4 HOH A 13 513 1 HOH HOH . D 4 HOH A 14 514 58 HOH HOH . D 4 HOH A 15 515 37 HOH HOH . D 4 HOH A 16 516 34 HOH HOH . D 4 HOH A 17 517 7 HOH HOH . D 4 HOH A 18 518 55 HOH HOH . D 4 HOH A 19 519 31 HOH HOH . D 4 HOH A 20 520 24 HOH HOH . D 4 HOH A 21 521 2 HOH HOH . D 4 HOH A 22 522 22 HOH HOH . D 4 HOH A 23 523 62 HOH HOH . D 4 HOH A 24 524 17 HOH HOH . D 4 HOH A 25 525 18 HOH HOH . D 4 HOH A 26 526 26 HOH HOH . D 4 HOH A 27 527 32 HOH HOH . D 4 HOH A 28 528 36 HOH HOH . D 4 HOH A 29 529 46 HOH HOH . D 4 HOH A 30 530 4 HOH HOH . D 4 HOH A 31 531 33 HOH HOH . D 4 HOH A 32 532 51 HOH HOH . D 4 HOH A 33 533 21 HOH HOH . D 4 HOH A 34 534 64 HOH HOH . D 4 HOH A 35 535 57 HOH HOH . D 4 HOH A 36 536 29 HOH HOH . D 4 HOH A 37 537 56 HOH HOH . D 4 HOH A 38 538 40 HOH HOH . D 4 HOH A 39 539 14 HOH HOH . D 4 HOH A 40 540 38 HOH HOH . D 4 HOH A 41 541 20 HOH HOH . D 4 HOH A 42 542 15 HOH HOH . D 4 HOH A 43 543 13 HOH HOH . D 4 HOH A 44 544 9 HOH HOH . D 4 HOH A 45 545 30 HOH HOH . D 4 HOH A 46 546 42 HOH HOH . D 4 HOH A 47 547 41 HOH HOH . D 4 HOH A 48 548 6 HOH HOH . D 4 HOH A 49 549 47 HOH HOH . D 4 HOH A 50 550 5 HOH HOH . D 4 HOH A 51 551 60 HOH HOH . D 4 HOH A 52 552 27 HOH HOH . D 4 HOH A 53 553 53 HOH HOH . D 4 HOH A 54 554 44 HOH HOH . D 4 HOH A 55 555 52 HOH HOH . D 4 HOH A 56 556 43 HOH HOH . D 4 HOH A 57 557 25 HOH HOH . D 4 HOH A 58 558 54 HOH HOH . D 4 HOH A 59 559 35 HOH HOH . D 4 HOH A 60 560 28 HOH HOH . D 4 HOH A 61 561 39 HOH HOH . D 4 HOH A 62 562 16 HOH HOH . D 4 HOH A 63 563 59 HOH HOH . D 4 HOH A 64 564 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 A1IF7 . . . C 3 -20.296 19.626 -4.346 1 69.39 ? C12 A1IF7 402 A 1 HETATM 2 C C14 A1IF7 . . . C 3 -18.441 19.855 -5.725 1 65.74 ? C14 A1IF7 402 A 1 HETATM 3 C C16 A1IF7 . . . C 3 -17.488 17.914 -5.543 1 61.85 ? C16 A1IF7 402 A 1 HETATM 4 N N17 A1IF7 . . . C 3 -18.571 17.893 -4.784 1 61.24 ? N17 A1IF7 402 A 1 HETATM 5 C C02 A1IF7 . . . C 3 -18.186 25.396 -8.667 1 63.1 ? C02 A1IF7 402 A 1 HETATM 6 C C04 A1IF7 . . . C 3 -17.391 24.22 -8.095 1 58.99 ? C04 A1IF7 402 A 1 HETATM 7 C C06 A1IF7 . . . C 3 -17.947 22.019 -7.013 1 62.26 ? C06 A1IF7 402 A 1 HETATM 8 C C08 A1IF7 . . . C 3 -18.794 21.179 -6.05 1 62.8 ? C08 A1IF7 402 A 1 HETATM 9 C C09 A1IF7 . . . C 3 -19.949 21.712 -5.492 1 66.2 ? C09 A1IF7 402 A 1 HETATM 10 C C11 A1IF7 . . . C 3 -20.708 20.925 -4.626 1 67.54 ? C11 A1IF7 402 A 1 HETATM 11 C C18 A1IF7 . . . C 3 -21.121 18.746 -3.397 1 69.56 ? C18 A1IF7 402 A 1 HETATM 12 C C19 A1IF7 . . . C 3 -21.66 17.492 -4.094 1 71.98 ? C19 A1IF7 402 A 1 HETATM 13 C C20 A1IF7 . . . C 3 -22.457 16.524 -3.209 1 76.84 ? C20 A1IF7 402 A 1 HETATM 14 C C21 A1IF7 . . . C 3 -23.84 16.601 -3.171 1 78.89 ? C21 A1IF7 402 A 1 HETATM 15 C C22 A1IF7 . . . C 3 -24.568 15.724 -2.381 1 76.72 ? C22 A1IF7 402 A 1 HETATM 16 C C23 A1IF7 . . . C 3 -23.914 14.762 -1.629 1 78.41 ? C23 A1IF7 402 A 1 HETATM 17 C C24 A1IF7 . . . C 3 -22.531 14.678 -1.667 1 77.45 ? C24 A1IF7 402 A 1 HETATM 18 C C25 A1IF7 . . . C 3 -21.803 15.555 -2.459 1 78.1 ? C25 A1IF7 402 A 1 HETATM 19 N N05 A1IF7 . . . C 3 -18.195 23.445 -7.163 1 61.37 ? N05 A1IF7 402 A 1 HETATM 20 N N13 A1IF7 . . . C 3 -19.177 19.134 -4.904 1 66.2 ? N13 A1IF7 402 A 1 HETATM 21 N N15 A1IF7 . . . C 3 -17.4 19.103 -6.118 1 59.78 ? N15 A1IF7 402 A 1 HETATM 22 O O01 A1IF7 . . . C 3 -17.963 26.562 -8.251 1 68.69 -1 O01 A1IF7 402 A 1 HETATM 23 O O03 A1IF7 . . . C 3 -19.059 25.207 -9.555 1 60.9 ? O03 A1IF7 402 A 1 HETATM 24 O O07 A1IF7 . . . C 3 -17.093 21.501 -7.653 1 55.98 ? O07 A1IF7 402 A 1 HETATM 25 O O10 A1IF7 . . . C 3 -20.275 22.822 -5.747 1 68.74 ? O10 A1IF7 402 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #