data_9FT9 # _model_server_result.job_id zun4YKejWdFl97pbKrvFrQ _model_server_result.datetime_utc '2025-06-25 21:46:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ft9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 9FT9 # _exptl.entry_id 9FT9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9FT9 _cell.length_a 137.7 _cell.length_b 137.7 _cell.length_c 63.95 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 9FT9 _atom_sites.fract_transf_matrix[1][1] 0.007262 _atom_sites.fract_transf_matrix[1][2] 0.004193 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008386 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015637 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ANP A 1 401 401 ANP ANP . D 4 HOH A 1 501 112 HOH HOH . D 4 HOH A 2 502 115 HOH HOH . D 4 HOH A 3 503 1 HOH HOH . D 4 HOH A 4 504 95 HOH HOH . D 4 HOH A 5 505 11 HOH HOH . D 4 HOH A 6 506 5 HOH HOH . D 4 HOH A 7 507 30 HOH HOH . D 4 HOH A 8 508 27 HOH HOH . D 4 HOH A 9 509 48 HOH HOH . D 4 HOH A 10 510 108 HOH HOH . D 4 HOH A 11 511 12 HOH HOH . D 4 HOH A 12 512 100 HOH HOH . D 4 HOH A 13 513 123 HOH HOH . D 4 HOH A 14 514 45 HOH HOH . D 4 HOH A 15 515 77 HOH HOH . D 4 HOH A 16 516 40 HOH HOH . D 4 HOH A 17 517 16 HOH HOH . D 4 HOH A 18 518 4 HOH HOH . D 4 HOH A 19 519 14 HOH HOH . D 4 HOH A 20 520 29 HOH HOH . D 4 HOH A 21 521 75 HOH HOH . D 4 HOH A 22 522 43 HOH HOH . D 4 HOH A 23 523 121 HOH HOH . D 4 HOH A 24 524 28 HOH HOH . D 4 HOH A 25 525 3 HOH HOH . D 4 HOH A 26 526 44 HOH HOH . D 4 HOH A 27 527 25 HOH HOH . D 4 HOH A 28 528 38 HOH HOH . D 4 HOH A 29 529 34 HOH HOH . D 4 HOH A 30 530 72 HOH HOH . D 4 HOH A 31 531 92 HOH HOH . D 4 HOH A 32 532 42 HOH HOH . D 4 HOH A 33 533 7 HOH HOH . D 4 HOH A 34 534 15 HOH HOH . D 4 HOH A 35 535 111 HOH HOH . D 4 HOH A 36 536 81 HOH HOH . D 4 HOH A 37 537 114 HOH HOH . D 4 HOH A 38 538 18 HOH HOH . D 4 HOH A 39 539 23 HOH HOH . D 4 HOH A 40 540 122 HOH HOH . D 4 HOH A 41 541 22 HOH HOH . D 4 HOH A 42 542 6 HOH HOH . D 4 HOH A 43 543 39 HOH HOH . D 4 HOH A 44 544 120 HOH HOH . D 4 HOH A 45 545 99 HOH HOH . D 4 HOH A 46 546 105 HOH HOH . D 4 HOH A 47 547 9 HOH HOH . D 4 HOH A 48 548 13 HOH HOH . D 4 HOH A 49 549 68 HOH HOH . D 4 HOH A 50 550 41 HOH HOH . D 4 HOH A 51 551 94 HOH HOH . D 4 HOH A 52 552 17 HOH HOH . D 4 HOH A 53 553 90 HOH HOH . D 4 HOH A 54 554 20 HOH HOH . D 4 HOH A 55 555 74 HOH HOH . D 4 HOH A 56 556 10 HOH HOH . D 4 HOH A 57 557 49 HOH HOH . D 4 HOH A 58 558 76 HOH HOH . D 4 HOH A 59 559 26 HOH HOH . D 4 HOH A 60 560 66 HOH HOH . D 4 HOH A 61 561 36 HOH HOH . D 4 HOH A 62 562 109 HOH HOH . D 4 HOH A 63 563 86 HOH HOH . D 4 HOH A 64 564 32 HOH HOH . D 4 HOH A 65 565 19 HOH HOH . D 4 HOH A 66 566 2 HOH HOH . D 4 HOH A 67 567 52 HOH HOH . D 4 HOH A 68 568 31 HOH HOH . D 4 HOH A 69 569 73 HOH HOH . D 4 HOH A 70 570 78 HOH HOH . D 4 HOH A 71 571 64 HOH HOH . D 4 HOH A 72 572 46 HOH HOH . D 4 HOH A 73 573 55 HOH HOH . D 4 HOH A 74 574 21 HOH HOH . D 4 HOH A 75 575 67 HOH HOH . D 4 HOH A 76 576 65 HOH HOH . D 4 HOH A 77 577 71 HOH HOH . D 4 HOH A 78 578 53 HOH HOH . D 4 HOH A 79 579 101 HOH HOH . D 4 HOH A 80 580 69 HOH HOH . D 4 HOH A 81 581 113 HOH HOH . D 4 HOH A 82 582 37 HOH HOH . D 4 HOH A 83 583 50 HOH HOH . D 4 HOH A 84 584 47 HOH HOH . D 4 HOH A 85 585 83 HOH HOH . D 4 HOH A 86 586 85 HOH HOH . D 4 HOH A 87 587 59 HOH HOH . D 4 HOH A 88 588 103 HOH HOH . D 4 HOH A 89 589 35 HOH HOH . D 4 HOH A 90 590 91 HOH HOH . D 4 HOH A 91 591 104 HOH HOH . D 4 HOH A 92 592 61 HOH HOH . D 4 HOH A 93 593 57 HOH HOH . D 4 HOH A 94 594 56 HOH HOH . D 4 HOH A 95 595 107 HOH HOH . D 4 HOH A 96 596 96 HOH HOH . D 4 HOH A 97 597 89 HOH HOH . D 4 HOH A 98 598 93 HOH HOH . D 4 HOH A 99 599 54 HOH HOH . D 4 HOH A 100 600 98 HOH HOH . D 4 HOH A 101 601 63 HOH HOH . D 4 HOH A 102 602 118 HOH HOH . D 4 HOH A 103 603 117 HOH HOH . D 4 HOH A 104 604 24 HOH HOH . D 4 HOH A 105 605 80 HOH HOH . D 4 HOH A 106 606 51 HOH HOH . D 4 HOH A 107 607 87 HOH HOH . D 4 HOH A 108 608 70 HOH HOH . D 4 HOH A 109 609 60 HOH HOH . D 4 HOH A 110 610 84 HOH HOH . D 4 HOH A 111 611 33 HOH HOH . D 4 HOH A 112 612 62 HOH HOH . D 4 HOH A 113 613 97 HOH HOH . D 4 HOH A 114 614 82 HOH HOH . D 4 HOH A 115 615 116 HOH HOH . D 4 HOH A 116 616 119 HOH HOH . E 4 HOH B 1 301 8 HOH HOH . E 4 HOH B 2 302 88 HOH HOH . E 4 HOH B 3 303 106 HOH HOH . E 4 HOH B 4 304 58 HOH HOH . E 4 HOH B 5 305 79 HOH HOH . E 4 HOH B 6 306 110 HOH HOH . E 4 HOH B 7 307 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . C 3 -44.576 54.956 -0.867 1 83.43 ? PG ANP 401 A 1 HETATM 2 O O1G ANP . . . C 3 -44.332 53.9 -1.897 1 118.49 ? O1G ANP 401 A 1 HETATM 3 O O2G ANP . . . C 3 -44.13 56.364 -1.378 1 76.29 ? O2G ANP 401 A 1 HETATM 4 O O3G ANP . . . C 3 -46.118 55.07 -0.607 1 97.56 ? O3G ANP 401 A 1 HETATM 5 P PB ANP . . . C 3 -44.487 53.807 1.76 1 88.48 ? PB ANP 401 A 1 HETATM 6 O O1B ANP . . . C 3 -44.957 52.473 1.284 1 84.52 ? O1B ANP 401 A 1 HETATM 7 O O2B ANP . . . C 3 -43.484 53.378 2.891 1 88.68 ? O2B ANP 401 A 1 HETATM 8 N N3B ANP . . . C 3 -43.688 54.621 0.529 1 91.63 ? N3B ANP 401 A 1 HETATM 9 P PA ANP . . . C 3 -45.609 56.439 2.095 1 68.47 ? PA ANP 401 A 1 HETATM 10 O O1A ANP . . . C 3 -45.167 56.876 0.779 1 71.79 ? O1A ANP 401 A 1 HETATM 11 O O2A ANP . . . C 3 -46.993 57.034 2.384 1 70.66 ? O2A ANP 401 A 1 HETATM 12 O O3A ANP . . . C 3 -45.57 54.806 2.34 1 75.82 ? O3A ANP 401 A 1 HETATM 13 O O5' ANP . . . C 3 -44.552 57.109 3.088 1 83.45 ? O5' ANP 401 A 1 HETATM 14 C C5' ANP . . . C 3 -43.12 57.212 2.874 1 69.76 ? C5' ANP 401 A 1 HETATM 15 C C4' ANP . . . C 3 -42.498 57.646 4.185 1 74.1 ? C4' ANP 401 A 1 HETATM 16 O O4' ANP . . . C 3 -42.72 59.061 4.371 1 67.06 ? O4' ANP 401 A 1 HETATM 17 C C3' ANP . . . C 3 -43.066 56.969 5.431 1 68.01 ? C3' ANP 401 A 1 HETATM 18 O O3' ANP . . . C 3 -42.3 55.837 5.817 1 72.12 ? O3' ANP 401 A 1 HETATM 19 C C2' ANP . . . C 3 -42.922 58.046 6.507 1 68.06 ? C2' ANP 401 A 1 HETATM 20 O O2' ANP . . . C 3 -41.628 58.023 7.094 1 77 ? O2' ANP 401 A 1 HETATM 21 C C1' ANP . . . C 3 -43.086 59.339 5.711 1 71.63 ? C1' ANP 401 A 1 HETATM 22 N N9 ANP . . . C 3 -44.438 59.879 5.736 1 65.75 ? N9 ANP 401 A 1 HETATM 23 C C8 ANP . . . C 3 -45.388 59.811 4.749 1 68.96 ? C8 ANP 401 A 1 HETATM 24 N N7 ANP . . . C 3 -46.529 60.392 5.05 1 70.05 ? N7 ANP 401 A 1 HETATM 25 C C5 ANP . . . C 3 -46.303 60.885 6.334 1 55.81 ? C5 ANP 401 A 1 HETATM 26 C C6 ANP . . . C 3 -47.126 61.605 7.221 1 57.46 ? C6 ANP 401 A 1 HETATM 27 N N6 ANP . . . C 3 -48.38 61.967 6.948 1 64.4 ? N6 ANP 401 A 1 HETATM 28 N N1 ANP . . . C 3 -46.601 61.935 8.426 1 62.23 ? N1 ANP 401 A 1 HETATM 29 C C2 ANP . . . C 3 -45.351 61.564 8.709 1 61.29 ? C2 ANP 401 A 1 HETATM 30 N N3 ANP . . . C 3 -44.49 60.881 7.953 1 57.63 ? N3 ANP 401 A 1 HETATM 31 C C4 ANP . . . C 3 -45.033 60.572 6.766 1 63.92 ? C4 ANP 401 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #