data_9FU1 # _model_server_result.job_id xcfsACNqzcuM_dEVOunwDA _model_server_result.datetime_utc '2025-01-24 17:53:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fu1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 9FU1 # _exptl.entry_id 9FU1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FU1 _cell.length_a 68.69 _cell.length_b 68.69 _cell.length_c 108.93 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FU1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 34 A CYS 34 1_555 A SG CYS 123 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 178 A CYS 178 1_555 A SG CYS 249 A CYS 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A O THR 16 A THR 16 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc2 A O PRO 175 A PRO 175 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc3 A O VAL 177 A VAL 177 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc4 A OD1 ASP 200 A ASP 200 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc5 A OD2 ASP 200 A ASP 200 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc6 A OD1 ASP 260 A ASP 260 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc7 A OD2 ASP 260 A ASP 260 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc8 B CA CA . A CA 501 1_555 E O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc9 B CA CA . A CA 501 1_555 E O HOH . A HOH 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc10 B CA CA . A CA 501 1_555 E O HOH . A HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc11 B CA CA . A CA 501 1_555 E O HOH . A HOH 737 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc12 C CA CA . A CA 502 1_555 E O HOH . A HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc13 C CA CA . A CA 502 1_555 E O HOH . A HOH 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc14 C CA CA . A CA 502 1_555 E O HOH . A HOH 722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc15 C CA CA . A CA 502 1_555 E O HOH . A HOH 735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 9FU1 _atom_sites.fract_transf_matrix[1][1] 0.014558 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014558 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 501 501 CA CA . C 2 CA A 1 502 502 CA CA . D 3 NO3 A 1 503 503 NO3 NO3 . E 4 HOH A 1 601 29 HOH HOH . E 4 HOH A 2 602 451 HOH HOH . E 4 HOH A 3 603 160 HOH HOH . E 4 HOH A 4 604 189 HOH HOH . E 4 HOH A 5 605 133 HOH HOH . E 4 HOH A 6 606 30 HOH HOH . E 4 HOH A 7 607 411 HOH HOH . E 4 HOH A 8 608 303 HOH HOH . E 4 HOH A 9 609 13 HOH HOH . E 4 HOH A 10 610 83 HOH HOH . E 4 HOH A 11 611 181 HOH HOH . E 4 HOH A 12 612 86 HOH HOH . E 4 HOH A 13 613 15 HOH HOH . E 4 HOH A 14 614 112 HOH HOH . E 4 HOH A 15 615 401 HOH HOH . E 4 HOH A 16 616 57 HOH HOH . E 4 HOH A 17 617 146 HOH HOH . E 4 HOH A 18 618 288 HOH HOH . E 4 HOH A 19 619 17 HOH HOH . E 4 HOH A 20 620 10 HOH HOH . E 4 HOH A 21 621 148 HOH HOH . E 4 HOH A 22 622 43 HOH HOH . E 4 HOH A 23 623 16 HOH HOH . E 4 HOH A 24 624 50 HOH HOH . E 4 HOH A 25 625 196 HOH HOH . E 4 HOH A 26 626 80 HOH HOH . E 4 HOH A 27 627 7 HOH HOH . E 4 HOH A 28 628 3 HOH HOH . E 4 HOH A 29 629 36 HOH HOH . E 4 HOH A 30 630 263 HOH HOH . E 4 HOH A 31 631 35 HOH HOH . E 4 HOH A 32 632 46 HOH HOH . E 4 HOH A 33 633 14 HOH HOH . E 4 HOH A 34 634 24 HOH HOH . E 4 HOH A 35 635 269 HOH HOH . E 4 HOH A 36 636 173 HOH HOH . E 4 HOH A 37 637 346 HOH HOH . E 4 HOH A 38 638 188 HOH HOH . E 4 HOH A 39 639 23 HOH HOH . E 4 HOH A 40 640 2 HOH HOH . E 4 HOH A 41 641 48 HOH HOH . E 4 HOH A 42 642 107 HOH HOH . E 4 HOH A 43 643 75 HOH HOH . E 4 HOH A 44 644 34 HOH HOH . E 4 HOH A 45 645 22 HOH HOH . E 4 HOH A 46 646 64 HOH HOH . E 4 HOH A 47 647 338 HOH HOH . E 4 HOH A 48 648 152 HOH HOH . E 4 HOH A 49 649 119 HOH HOH . E 4 HOH A 50 650 281 HOH HOH . E 4 HOH A 51 651 306 HOH HOH . E 4 HOH A 52 652 259 HOH HOH . E 4 HOH A 53 653 170 HOH HOH . E 4 HOH A 54 654 66 HOH HOH . E 4 HOH A 55 655 1 HOH HOH . E 4 HOH A 56 656 65 HOH HOH . E 4 HOH A 57 657 84 HOH HOH . E 4 HOH A 58 658 60 HOH HOH . E 4 HOH A 59 659 8 HOH HOH . E 4 HOH A 60 660 9 HOH HOH . E 4 HOH A 61 661 161 HOH HOH . E 4 HOH A 62 662 99 HOH HOH . E 4 HOH A 63 663 19 HOH HOH . E 4 HOH A 64 664 44 HOH HOH . E 4 HOH A 65 665 20 HOH HOH . E 4 HOH A 66 666 364 HOH HOH . E 4 HOH A 67 667 217 HOH HOH . E 4 HOH A 68 668 4 HOH HOH . E 4 HOH A 69 669 40 HOH HOH . E 4 HOH A 70 670 28 HOH HOH . E 4 HOH A 71 671 18 HOH HOH . E 4 HOH A 72 672 113 HOH HOH . E 4 HOH A 73 673 446 HOH HOH . E 4 HOH A 74 674 328 HOH HOH . E 4 HOH A 75 675 205 HOH HOH . E 4 HOH A 76 676 63 HOH HOH . E 4 HOH A 77 677 221 HOH HOH . E 4 HOH A 78 678 197 HOH HOH . E 4 HOH A 79 679 11 HOH HOH . E 4 HOH A 80 680 52 HOH HOH . E 4 HOH A 81 681 53 HOH HOH . E 4 HOH A 82 682 131 HOH HOH . E 4 HOH A 83 683 110 HOH HOH . E 4 HOH A 84 684 132 HOH HOH . E 4 HOH A 85 685 213 HOH HOH . E 4 HOH A 86 686 97 HOH HOH . E 4 HOH A 87 687 49 HOH HOH . E 4 HOH A 88 688 158 HOH HOH . E 4 HOH A 89 689 149 HOH HOH . E 4 HOH A 90 690 27 HOH HOH . E 4 HOH A 91 691 308 HOH HOH . E 4 HOH A 92 692 455 HOH HOH . E 4 HOH A 93 693 70 HOH HOH . E 4 HOH A 94 694 12 HOH HOH . E 4 HOH A 95 695 51 HOH HOH . E 4 HOH A 96 696 37 HOH HOH . E 4 HOH A 97 697 277 HOH HOH . E 4 HOH A 98 698 280 HOH HOH . E 4 HOH A 99 699 32 HOH HOH . E 4 HOH A 100 700 273 HOH HOH . E 4 HOH A 101 701 162 HOH HOH . E 4 HOH A 102 702 87 HOH HOH . E 4 HOH A 103 703 452 HOH HOH . E 4 HOH A 104 704 31 HOH HOH . E 4 HOH A 105 705 150 HOH HOH . E 4 HOH A 106 706 287 HOH HOH . E 4 HOH A 107 707 246 HOH HOH . E 4 HOH A 108 708 21 HOH HOH . E 4 HOH A 109 709 54 HOH HOH . E 4 HOH A 110 710 226 HOH HOH . E 4 HOH A 111 711 123 HOH HOH . E 4 HOH A 112 712 475 HOH HOH . E 4 HOH A 113 713 69 HOH HOH . E 4 HOH A 114 714 26 HOH HOH . E 4 HOH A 115 715 233 HOH HOH . E 4 HOH A 116 716 151 HOH HOH . E 4 HOH A 117 717 219 HOH HOH . E 4 HOH A 118 718 38 HOH HOH . E 4 HOH A 119 719 5 HOH HOH . E 4 HOH A 120 720 254 HOH HOH . E 4 HOH A 121 721 415 HOH HOH . E 4 HOH A 122 722 62 HOH HOH . E 4 HOH A 123 723 90 HOH HOH . E 4 HOH A 124 724 211 HOH HOH . E 4 HOH A 125 725 253 HOH HOH . E 4 HOH A 126 726 231 HOH HOH . E 4 HOH A 127 727 282 HOH HOH . E 4 HOH A 128 728 242 HOH HOH . E 4 HOH A 129 729 78 HOH HOH . E 4 HOH A 130 730 257 HOH HOH . E 4 HOH A 131 731 124 HOH HOH . E 4 HOH A 132 732 45 HOH HOH . E 4 HOH A 133 733 487 HOH HOH . E 4 HOH A 134 734 71 HOH HOH . E 4 HOH A 135 735 39 HOH HOH . E 4 HOH A 136 736 258 HOH HOH . E 4 HOH A 137 737 6 HOH HOH . E 4 HOH A 138 738 407 HOH HOH . E 4 HOH A 139 739 59 HOH HOH . E 4 HOH A 140 740 89 HOH HOH . E 4 HOH A 141 741 310 HOH HOH . E 4 HOH A 142 742 239 HOH HOH . E 4 HOH A 143 743 47 HOH HOH . E 4 HOH A 144 744 305 HOH HOH . E 4 HOH A 145 745 42 HOH HOH . E 4 HOH A 146 746 25 HOH HOH . E 4 HOH A 147 747 439 HOH HOH . E 4 HOH A 148 748 262 HOH HOH . E 4 HOH A 149 749 423 HOH HOH . E 4 HOH A 150 750 412 HOH HOH . E 4 HOH A 151 751 237 HOH HOH . E 4 HOH A 152 752 183 HOH HOH . E 4 HOH A 153 753 135 HOH HOH . E 4 HOH A 154 754 289 HOH HOH . E 4 HOH A 155 755 180 HOH HOH . E 4 HOH A 156 756 249 HOH HOH . E 4 HOH A 157 757 414 HOH HOH . E 4 HOH A 158 758 396 HOH HOH . E 4 HOH A 159 759 391 HOH HOH . E 4 HOH A 160 760 438 HOH HOH . E 4 HOH A 161 761 326 HOH HOH . E 4 HOH A 162 762 491 HOH HOH . E 4 HOH A 163 763 202 HOH HOH . E 4 HOH A 164 764 92 HOH HOH . E 4 HOH A 165 765 501 HOH HOH . E 4 HOH A 166 766 240 HOH HOH . E 4 HOH A 167 767 250 HOH HOH . E 4 HOH A 168 768 365 HOH HOH . E 4 HOH A 169 769 274 HOH HOH . E 4 HOH A 170 770 368 HOH HOH . E 4 HOH A 171 771 143 HOH HOH . E 4 HOH A 172 772 33 HOH HOH . E 4 HOH A 173 773 255 HOH HOH . E 4 HOH A 174 774 301 HOH HOH . E 4 HOH A 175 775 480 HOH HOH . E 4 HOH A 176 776 329 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . D 3 33.139 -16.449 -15.959 1 37.42 ? N NO3 503 A 1 HETATM 2 O O1 NO3 . . . D 3 34.343 -16.56 -16.24 1 46.83 ? O1 NO3 503 A 1 HETATM 3 O O2 NO3 . . . D 3 32.783 -16.358 -14.778 1 36.61 ? O2 NO3 503 A 1 HETATM 4 O O3 NO3 . . . D 3 32.292 -16.423 -16.86 1 38.5 ? O3 NO3 503 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #