data_9FUP # _model_server_result.job_id V1GTYKDzPM72xJdMLL9IiQ _model_server_result.datetime_utc '2025-01-24 17:48:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 9FUP # _exptl.entry_id 9FUP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FUP _cell.length_a 40.17 _cell.length_b 179.4 _cell.length_c 142.43 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 71 1_555 A SG CYS 168 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 83 A CYS 74 1_555 A SG CYS 155 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 86 A CYS 77 1_555 A SG CYS 175 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 364 A CYS 259 1_555 A SG CYS 367 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A OD1 ASP 61 A ASP 52 1_555 B NA NA . A NA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc2 A OG SER 100 A SER 91 1_555 B NA NA . A NA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc3 B NA NA . A NA 1201 1_555 V O HOH . A HOH 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 B NA NA . A NA 1201 1_555 V O HOH . A HOH 1312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc5 B NA NA . A NA 1201 1_555 V O HOH . A HOH 1334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.159 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9FUP _atom_sites.fract_transf_matrix[1][1] 0.024894 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 1201 1201 NA NA . C 3 CLR A 1 1202 1202 CLR CLR . D 3 CLR A 1 1203 1203 CLR CLR . E 3 CLR A 1 1204 1204 CLR CLR . F 4 OLA A 1 1205 1205 OLA OLA . G 4 OLA A 1 1206 1206 OLA OLA . H 4 OLA A 1 1207 1207 OLA OLA . I 4 OLA A 1 1208 1208 OLA OLA . J 4 OLA A 1 1209 1210 OLA OLA . K 4 OLA A 1 1210 1211 OLA OLA . L 4 OLA A 1 1211 1212 OLA OLA . M 4 OLA A 1 1212 1213 OLA OLA . N 4 OLA A 1 1213 1214 OLA OLA . O 4 OLA A 1 1214 1215 OLA OLA . P 4 OLA A 1 1215 1218 OLA OLA . Q 5 OLB A 1 1216 1220 OLB OLB . R 5 OLB A 1 1217 1221 OLB OLB . S 6 OLC A 1 1218 1222 OLC OLC . T 6 OLC A 1 1219 1223 OLC OLC . U 7 JQ9 A 1 1220 1224 JQ9 JQ9 . V 8 HOH A 1 1301 162 HOH HOH . V 8 HOH A 2 1302 1 HOH HOH . V 8 HOH A 3 1303 168 HOH HOH . V 8 HOH A 4 1304 163 HOH HOH . V 8 HOH A 5 1305 164 HOH HOH . V 8 HOH A 6 1306 43 HOH HOH . V 8 HOH A 7 1307 160 HOH HOH . V 8 HOH A 8 1308 23 HOH HOH . V 8 HOH A 9 1309 37 HOH HOH . V 8 HOH A 10 1310 49 HOH HOH . V 8 HOH A 11 1311 32 HOH HOH . V 8 HOH A 12 1312 166 HOH HOH . V 8 HOH A 13 1313 40 HOH HOH . V 8 HOH A 14 1314 7 HOH HOH . V 8 HOH A 15 1315 156 HOH HOH . V 8 HOH A 16 1316 36 HOH HOH . V 8 HOH A 17 1317 26 HOH HOH . V 8 HOH A 18 1318 3 HOH HOH . V 8 HOH A 19 1319 10 HOH HOH . V 8 HOH A 20 1320 46 HOH HOH . V 8 HOH A 21 1321 150 HOH HOH . V 8 HOH A 22 1322 11 HOH HOH . V 8 HOH A 23 1323 161 HOH HOH . V 8 HOH A 24 1324 15 HOH HOH . V 8 HOH A 25 1325 159 HOH HOH . V 8 HOH A 26 1326 109 HOH HOH . V 8 HOH A 27 1327 4 HOH HOH . V 8 HOH A 28 1328 2 HOH HOH . V 8 HOH A 29 1329 154 HOH HOH . V 8 HOH A 30 1330 48 HOH HOH . V 8 HOH A 31 1331 169 HOH HOH . V 8 HOH A 32 1332 155 HOH HOH . V 8 HOH A 33 1333 157 HOH HOH . V 8 HOH A 34 1334 165 HOH HOH . V 8 HOH A 35 1335 47 HOH HOH . V 8 HOH A 36 1336 158 HOH HOH . V 8 HOH A 37 1337 167 HOH HOH . V 8 HOH A 38 1338 89 HOH HOH . V 8 HOH A 39 1339 62 HOH HOH . V 8 HOH A 40 1340 152 HOH HOH . V 8 HOH A 41 1341 153 HOH HOH . V 8 HOH A 42 1342 151 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 23.415 _atom_site.Cartn_y 8.717 _atom_site.Cartn_z 16.375 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #