data_9FUP # _model_server_result.job_id tTSbisLQLhR7XARbXA69nw _model_server_result.datetime_utc '2025-01-24 17:50:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":1218}' # _entry.id 9FUP # _exptl.entry_id 9FUP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FUP _cell.length_a 40.17 _cell.length_b 179.4 _cell.length_c 142.43 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 S N N ? 6 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 71 1_555 A SG CYS 168 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 83 A CYS 74 1_555 A SG CYS 155 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 86 A CYS 77 1_555 A SG CYS 175 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 364 A CYS 259 1_555 A SG CYS 367 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A OD1 ASP 61 A ASP 52 1_555 B NA NA . A NA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc2 A OG SER 100 A SER 91 1_555 B NA NA . A NA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc3 B NA NA . A NA 1201 1_555 V O HOH . A HOH 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 B NA NA . A NA 1201 1_555 V O HOH . A HOH 1312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc5 B NA NA . A NA 1201 1_555 V O HOH . A HOH 1334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.159 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 485 n n C10 C9 OLC doub 486 n n C10 C11 OLC sing 487 n n C9 C8 OLC sing 488 n n C17 C16 OLC sing 489 z n C11 C12 OLC sing 490 n n C8 C7 OLC sing 491 n n C24 C22 OLC sing 492 n n C24 O25 OLC sing 493 n n C16 C15 OLC sing 494 n n C12 C13 OLC sing 495 n n C7 C6 OLC sing 496 n n C15 C14 OLC sing 497 n n C13 C14 OLC sing 498 n n C6 C5 OLC sing 499 n n C5 C4 OLC sing 500 n n C4 C3 OLC sing 501 n n C3 C2 OLC sing 502 n n C2 C1 OLC sing 503 n n C21 C22 OLC sing 504 n n C21 O20 OLC sing 505 n n C1 O19 OLC doub 506 n n C1 O20 OLC sing 507 n n C22 O23 OLC sing 508 n n C18 H18 OLC sing 509 n n C18 H18A OLC sing 510 n n C18 H18B OLC sing 511 n n C10 H10 OLC sing 512 n n C9 H9 OLC sing 513 n n C17 H17 OLC sing 514 n n C17 H17A OLC sing 515 n n C11 H11 OLC sing 516 n n C11 H11A OLC sing 517 n n C8 H8 OLC sing 518 n n C8 H8A OLC sing 519 n n C24 H24 OLC sing 520 n n C24 H24A OLC sing 521 n n C16 H16 OLC sing 522 n n C16 H16A OLC sing 523 n n C12 H12 OLC sing 524 n n C12 H12A OLC sing 525 n n C7 H7 OLC sing 526 n n C7 H7A OLC sing 527 n n C15 H15 OLC sing 528 n n C15 H15A OLC sing 529 n n C13 H13 OLC sing 530 n n C13 H13A OLC sing 531 n n C6 H6 OLC sing 532 n n C6 H6A OLC sing 533 n n C14 H14 OLC sing 534 n n C14 H14A OLC sing 535 n n C5 H5 OLC sing 536 n n C5 H5A OLC sing 537 n n C4 H4 OLC sing 538 n n C4 H4A OLC sing 539 n n C3 H3 OLC sing 540 n n C3 H3A OLC sing 541 n n C2 H2 OLC sing 542 n n C2 H2A OLC sing 543 n n C21 H21 OLC sing 544 n n C21 H21A OLC sing 545 n n C22 H22 OLC sing 546 n n O25 HO25 OLC sing 547 n n O23 HO23 OLC sing 548 n n # _atom_sites.entry_id 9FUP _atom_sites.fract_transf_matrix[1][1] 0.024894 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 1201 1201 NA NA . C 3 CLR A 1 1202 1202 CLR CLR . D 3 CLR A 1 1203 1203 CLR CLR . E 3 CLR A 1 1204 1204 CLR CLR . F 4 OLA A 1 1205 1205 OLA OLA . G 4 OLA A 1 1206 1206 OLA OLA . H 4 OLA A 1 1207 1207 OLA OLA . I 4 OLA A 1 1208 1208 OLA OLA . J 4 OLA A 1 1209 1210 OLA OLA . K 4 OLA A 1 1210 1211 OLA OLA . L 4 OLA A 1 1211 1212 OLA OLA . M 4 OLA A 1 1212 1213 OLA OLA . N 4 OLA A 1 1213 1214 OLA OLA . O 4 OLA A 1 1214 1215 OLA OLA . P 4 OLA A 1 1215 1218 OLA OLA . Q 5 OLB A 1 1216 1220 OLB OLB . R 5 OLB A 1 1217 1221 OLB OLB . S 6 OLC A 1 1218 1222 OLC OLC . T 6 OLC A 1 1219 1223 OLC OLC . U 7 JQ9 A 1 1220 1224 JQ9 JQ9 . V 8 HOH A 1 1301 162 HOH HOH . V 8 HOH A 2 1302 1 HOH HOH . V 8 HOH A 3 1303 168 HOH HOH . V 8 HOH A 4 1304 163 HOH HOH . V 8 HOH A 5 1305 164 HOH HOH . V 8 HOH A 6 1306 43 HOH HOH . V 8 HOH A 7 1307 160 HOH HOH . V 8 HOH A 8 1308 23 HOH HOH . V 8 HOH A 9 1309 37 HOH HOH . V 8 HOH A 10 1310 49 HOH HOH . V 8 HOH A 11 1311 32 HOH HOH . V 8 HOH A 12 1312 166 HOH HOH . V 8 HOH A 13 1313 40 HOH HOH . V 8 HOH A 14 1314 7 HOH HOH . V 8 HOH A 15 1315 156 HOH HOH . V 8 HOH A 16 1316 36 HOH HOH . V 8 HOH A 17 1317 26 HOH HOH . V 8 HOH A 18 1318 3 HOH HOH . V 8 HOH A 19 1319 10 HOH HOH . V 8 HOH A 20 1320 46 HOH HOH . V 8 HOH A 21 1321 150 HOH HOH . V 8 HOH A 22 1322 11 HOH HOH . V 8 HOH A 23 1323 161 HOH HOH . V 8 HOH A 24 1324 15 HOH HOH . V 8 HOH A 25 1325 159 HOH HOH . V 8 HOH A 26 1326 109 HOH HOH . V 8 HOH A 27 1327 4 HOH HOH . V 8 HOH A 28 1328 2 HOH HOH . V 8 HOH A 29 1329 154 HOH HOH . V 8 HOH A 30 1330 48 HOH HOH . V 8 HOH A 31 1331 169 HOH HOH . V 8 HOH A 32 1332 155 HOH HOH . V 8 HOH A 33 1333 157 HOH HOH . V 8 HOH A 34 1334 165 HOH HOH . V 8 HOH A 35 1335 47 HOH HOH . V 8 HOH A 36 1336 158 HOH HOH . V 8 HOH A 37 1337 167 HOH HOH . V 8 HOH A 38 1338 89 HOH HOH . V 8 HOH A 39 1339 62 HOH HOH . V 8 HOH A 40 1340 152 HOH HOH . V 8 HOH A 41 1341 153 HOH HOH . V 8 HOH A 42 1342 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . S 6 41.048 5.548 16.98 0.64 95.01 ? C18 OLC 1218 A 1 HETATM 2 C C10 OLC . . . S 6 38.427 -3.14 15.243 0.64 71.15 ? C10 OLC 1218 A 1 HETATM 3 C C9 OLC . . . S 6 37.952 -4.344 15.536 0.64 68.56 ? C9 OLC 1218 A 1 HETATM 4 C C17 OLC . . . S 6 40.872 4.597 15.805 0.64 85.79 ? C17 OLC 1218 A 1 HETATM 5 C C11 OLC . . . S 6 38.582 -1.99 16.184 0.64 71.21 ? C11 OLC 1218 A 1 HETATM 6 C C8 OLC . . . S 6 37.461 -4.793 16.874 0.64 69.2 ? C8 OLC 1218 A 1 HETATM 7 C C24 OLC . . . S 6 39.54 -17.669 19.261 0.64 90.24 ? C24 OLC 1218 A 1 HETATM 8 C C16 OLC . . . S 6 41.57 3.259 16.023 0.64 85.59 ? C16 OLC 1218 A 1 HETATM 9 C C12 OLC . . . S 6 38.716 -0.662 15.445 0.64 72.01 ? C12 OLC 1218 A 1 HETATM 10 C C7 OLC . . . S 6 36.733 -6.131 16.79 0.64 72.46 ? C7 OLC 1218 A 1 HETATM 11 C C15 OLC . . . S 6 40.984 2.124 15.193 0.64 83.7 ? C15 OLC 1218 A 1 HETATM 12 C C13 OLC . . . S 6 40.167 -0.28 15.185 0.64 76.74 ? C13 OLC 1218 A 1 HETATM 13 C C6 OLC . . . S 6 37.634 -7.276 16.357 0.64 75.43 ? C6 OLC 1218 A 1 HETATM 14 C C14 OLC . . . S 6 40.645 0.896 16.028 0.64 79.63 ? C14 OLC 1218 A 1 HETATM 15 C C5 OLC . . . S 6 37.733 -8.379 17.402 0.64 74.86 ? C5 OLC 1218 A 1 HETATM 16 C C4 OLC . . . S 6 38.041 -9.733 16.782 0.64 80.01 ? C4 OLC 1218 A 1 HETATM 17 C C3 OLC . . . S 6 38.4 -10.791 17.815 0.64 83.11 ? C3 OLC 1218 A 1 HETATM 18 C C2 OLC . . . S 6 38.811 -12.091 17.145 0.64 83.86 ? C2 OLC 1218 A 1 HETATM 19 C C21 OLC . . . S 6 39.87 -15.357 18.468 0.64 86.39 ? C21 OLC 1218 A 1 HETATM 20 C C1 OLC . . . S 6 39.48 -13.061 18.077 0.64 84.47 ? C1 OLC 1218 A 1 HETATM 21 C C22 OLC . . . S 6 38.951 -16.567 18.391 0.64 88.67 ? C22 OLC 1218 A 1 HETATM 22 O O19 OLC . . . S 6 40.104 -12.755 19.063 0.64 87.55 ? O19 OLC 1218 A 1 HETATM 23 O O25 OLC . . . S 6 38.76 -17.813 20.422 0.64 88.98 ? O25 OLC 1218 A 1 HETATM 24 O O23 OLC . . . S 6 37.618 -16.248 18.701 0.64 88.59 ? O23 OLC 1218 A 1 HETATM 25 O O20 OLC . . . S 6 39.297 -14.317 17.682 0.64 85.77 ? O20 OLC 1218 A 1 HETATM 26 H H18 OLC . . . S 6 41.987 5.723 17.15 0.64 114.05 ? H18 OLC 1218 A 1 HETATM 27 H H18A OLC . . . S 6 40.665 5.177 17.79 0.64 114.05 ? H18A OLC 1218 A 1 HETATM 28 H H18B OLC . . . S 6 40.614 6.398 16.809 0.64 114.05 ? H18B OLC 1218 A 1 HETATM 29 H H10 OLC . . . S 6 38.694 -2.98 14.366 0.64 85.43 ? H10 OLC 1218 A 1 HETATM 30 H H9 OLC . . . S 6 37.915 -4.98 14.858 0.64 82.31 ? H9 OLC 1218 A 1 HETATM 31 H H17 OLC . . . S 6 41.214 5.01 14.997 0.64 103 ? H17 OLC 1218 A 1 HETATM 32 H H17A OLC . . . S 6 39.927 4.444 15.648 0.64 103 ? H17A OLC 1218 A 1 HETATM 33 H H11 OLC . . . S 6 37.821 -1.946 16.784 0.64 85.49 ? H11 OLC 1218 A 1 HETATM 34 H H11A OLC . . . S 6 39.361 -2.123 16.746 0.64 85.49 ? H11A OLC 1218 A 1 HETATM 35 H H8 OLC . . . S 6 38.206 -4.872 17.491 0.64 83.08 ? H8 OLC 1218 A 1 HETATM 36 H H8A OLC . . . S 6 36.863 -4.126 17.248 0.64 83.08 ? H8A OLC 1218 A 1 HETATM 37 H H24 OLC . . . S 6 39.57 -18.489 18.745 0.64 108.33 ? H24 OLC 1218 A 1 HETATM 38 H H24A OLC . . . S 6 40.459 -17.44 19.472 0.64 108.33 ? H24A OLC 1218 A 1 HETATM 39 H H16 OLC . . . S 6 42.513 3.353 15.816 0.64 102.75 ? H16 OLC 1218 A 1 HETATM 40 H H16A OLC . . . S 6 41.525 3.025 16.963 0.64 102.75 ? H16A OLC 1218 A 1 HETATM 41 H H12 OLC . . . S 6 38.284 0.038 15.958 0.64 86.46 ? H12 OLC 1218 A 1 HETATM 42 H H12A OLC . . . S 6 38.238 -0.712 14.602 0.64 86.46 ? H12A OLC 1218 A 1 HETATM 43 H H7 OLC . . . S 6 35.991 -6.052 16.17 0.64 87 ? H7 OLC 1218 A 1 HETATM 44 H H7A OLC . . . S 6 36.342 -6.336 17.654 0.64 87 ? H7A OLC 1218 A 1 HETATM 45 H H15 OLC . . . S 6 40.186 2.436 14.739 0.64 100.48 ? H15 OLC 1218 A 1 HETATM 46 H H15A OLC . . . S 6 41.61 1.879 14.495 0.64 100.48 ? H15A OLC 1218 A 1 HETATM 47 H H13 OLC . . . S 6 40.278 -0.065 14.245 0.64 92.13 ? H13 OLC 1218 A 1 HETATM 48 H H13A OLC . . . S 6 40.736 -1.047 15.354 0.64 92.13 ? H13A OLC 1218 A 1 HETATM 49 H H6 OLC . . . S 6 38.522 -6.934 16.167 0.64 90.56 ? H6 OLC 1218 A 1 HETATM 50 H H6A OLC . . . S 6 37.305 -7.65 15.525 0.64 90.56 ? H6A OLC 1218 A 1 HETATM 51 H H14 OLC . . . S 6 39.963 1.123 16.678 0.64 95.6 ? H14 OLC 1218 A 1 HETATM 52 H H14A OLC . . . S 6 41.424 0.627 16.54 0.64 95.6 ? H14A OLC 1218 A 1 HETATM 53 H H5 OLC . . . S 6 36.902 -8.432 17.9 0.64 89.88 ? H5 OLC 1218 A 1 HETATM 54 H H5A OLC . . . S 6 38.419 -8.156 18.049 0.64 89.88 ? H5A OLC 1218 A 1 HETATM 55 H H4 OLC . . . S 6 37.275 -10.035 16.268 0.64 96.05 ? H4 OLC 1218 A 1 HETATM 56 H H4A OLC . . . S 6 38.771 -9.641 16.151 0.64 96.05 ? H4A OLC 1218 A 1 HETATM 57 H H3 OLC . . . S 6 37.643 -10.946 18.401 0.64 99.77 ? H3 OLC 1218 A 1 HETATM 58 H H3A OLC . . . S 6 39.12 -10.466 18.378 0.64 99.77 ? H3A OLC 1218 A 1 HETATM 59 H H2 OLC . . . S 6 38.043 -12.535 16.754 0.64 100.68 ? H2 OLC 1218 A 1 HETATM 60 H H2A OLC . . . S 6 39.416 -11.922 16.406 0.64 100.68 ? H2A OLC 1218 A 1 HETATM 61 H H21 OLC . . . S 6 40.753 -15.577 18.133 0.64 103.71 ? H21 OLC 1218 A 1 HETATM 62 H H21A OLC . . . S 6 39.967 -15.061 19.387 0.64 103.71 ? H21A OLC 1218 A 1 HETATM 63 H H22 OLC . . . S 6 38.914 -16.89 17.477 0.64 106.45 ? H22 OLC 1218 A 1 HETATM 64 H HO25 OLC . . . S 6 39.241 -17.601 21.09 0.64 106.82 ? HO25 OLC 1218 A 1 HETATM 65 H HO23 OLC . . . S 6 37.11 -16.839 18.362 0.64 106.35 ? HO23 OLC 1218 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 65 #