data_9FX5 # _model_server_result.job_id 64e8juzkvSufuTQxE4kSCg _model_server_result.datetime_utc '2024-10-19 03:38:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fx5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 9FX5 # _exptl.entry_id 9FX5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FX5 _cell.length_a 58.449 _cell.length_b 58.449 _cell.length_c 151.499 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FX5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 9 1_555 A SG CYS 226 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 78 A CYS 56 1_555 A SG CYS 88 A CYS 66 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 78 A CYS 56 1_555 A SG CYS 88 A CYS 66 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 A SG CYS 93 A CYS 71 1_555 A SG CYS 99 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 A SG CYS 143 A CYS 121 1_555 A SG CYS 215 A CYS 193 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 A SG CYS 143 A CYS 121 1_555 A SG CYS 215 A CYS 193 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.045 ? disulf ? disulf7 A SG CYS 148 A CYS 126 1_555 A SG CYS 199 A CYS 177 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf8 A SG CYS 148 A CYS 126 1_555 A SG CYS 199 A CYS 177 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf9 A SG CYS 156 A CYS 134 1_555 A SG CYS 167 A CYS 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf10 A SG CYS 171 A CYS 149 1_555 A SG CYS 180 A CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf11 A SG CYS 181 A CYS 159 1_555 A SG CYS 186 A CYS 164 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf12 A SG CYS 181 A CYS 159 1_555 A SG CYS 186 A CYS 164 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf13 A SG CYS 181 A CYS 159 1_555 A SG CYS 186 A CYS 164 1_555 ? C ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 285 n n O11 C1 TLA sing 286 n n O11 H11 TLA sing 287 n n C1 C2 TLA sing 288 n n C2 O2 TLA sing 289 n n C2 C3 TLA sing 290 n n C2 H2 TLA sing 291 n n O2 HA TLA sing 292 n n C3 O3 TLA sing 293 n n C3 C4 TLA sing 294 n n C3 H3 TLA sing 295 n n O3 HB TLA sing 296 n n C4 O4 TLA doub 297 n n C4 O41 TLA sing 298 n n O41 H41 TLA sing 299 n n # _atom_sites.entry_id 9FX5 _atom_sites.fract_transf_matrix[1][1] 0.017109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006601 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TLA A 1 1001 1001 TLA TLA . C 3 HOH A 1 1101 1069 HOH HOH . C 3 HOH A 2 1102 1048 HOH HOH . C 3 HOH A 3 1103 1055 HOH HOH . C 3 HOH A 4 1104 1112 HOH HOH . C 3 HOH A 5 1105 1068 HOH HOH . C 3 HOH A 6 1106 1011 HOH HOH . C 3 HOH A 7 1107 1117 HOH HOH . C 3 HOH A 8 1108 1173 HOH HOH . C 3 HOH A 9 1109 1121 HOH HOH . C 3 HOH A 10 1110 1257 HOH HOH . C 3 HOH A 11 1111 1049 HOH HOH . C 3 HOH A 12 1112 1138 HOH HOH . C 3 HOH A 13 1113 1070 HOH HOH . C 3 HOH A 14 1114 1012 HOH HOH . C 3 HOH A 15 1115 1089 HOH HOH . C 3 HOH A 16 1116 1006 HOH HOH . C 3 HOH A 17 1117 1252 HOH HOH . C 3 HOH A 18 1118 1186 HOH HOH . C 3 HOH A 19 1119 1026 HOH HOH . C 3 HOH A 20 1120 1002 HOH HOH . C 3 HOH A 21 1121 1009 HOH HOH . C 3 HOH A 22 1122 1351 HOH HOH . C 3 HOH A 23 1123 1084 HOH HOH . C 3 HOH A 24 1124 1159 HOH HOH . C 3 HOH A 25 1125 1023 HOH HOH . C 3 HOH A 26 1126 1016 HOH HOH . C 3 HOH A 27 1127 1040 HOH HOH . C 3 HOH A 28 1128 1100 HOH HOH . C 3 HOH A 29 1129 1064 HOH HOH . C 3 HOH A 30 1130 1033 HOH HOH . C 3 HOH A 31 1131 1039 HOH HOH . C 3 HOH A 32 1132 1015 HOH HOH . C 3 HOH A 33 1133 1078 HOH HOH . C 3 HOH A 34 1134 6 HOH HOH . C 3 HOH A 35 1135 1101 HOH HOH . C 3 HOH A 36 1136 1054 HOH HOH . C 3 HOH A 37 1137 1062 HOH HOH . C 3 HOH A 38 1138 1298 HOH HOH . C 3 HOH A 39 1139 1119 HOH HOH . C 3 HOH A 40 1140 1122 HOH HOH . C 3 HOH A 41 1141 1036 HOH HOH . C 3 HOH A 42 1142 1047 HOH HOH . C 3 HOH A 43 1143 1201 HOH HOH . C 3 HOH A 44 1144 1034 HOH HOH . C 3 HOH A 45 1145 1066 HOH HOH . C 3 HOH A 46 1146 1010 HOH HOH . C 3 HOH A 47 1147 1128 HOH HOH . C 3 HOH A 48 1148 1013 HOH HOH . C 3 HOH A 49 1149 1266 HOH HOH . C 3 HOH A 50 1150 1085 HOH HOH . C 3 HOH A 51 1151 1021 HOH HOH . C 3 HOH A 52 1152 1038 HOH HOH . C 3 HOH A 53 1153 1004 HOH HOH . C 3 HOH A 54 1154 1213 HOH HOH . C 3 HOH A 55 1155 1141 HOH HOH . C 3 HOH A 56 1156 1094 HOH HOH . C 3 HOH A 57 1157 1185 HOH HOH . C 3 HOH A 58 1158 1265 HOH HOH . C 3 HOH A 59 1159 1148 HOH HOH . C 3 HOH A 60 1160 1003 HOH HOH . C 3 HOH A 61 1161 1158 HOH HOH . C 3 HOH A 62 1162 23 HOH HOH . C 3 HOH A 63 1163 1072 HOH HOH . C 3 HOH A 64 1164 1244 HOH HOH . C 3 HOH A 65 1165 1092 HOH HOH . C 3 HOH A 66 1166 1303 HOH HOH . C 3 HOH A 67 1167 1149 HOH HOH . C 3 HOH A 68 1168 1058 HOH HOH . C 3 HOH A 69 1169 1090 HOH HOH . C 3 HOH A 70 1170 1123 HOH HOH . C 3 HOH A 71 1171 1118 HOH HOH . C 3 HOH A 72 1172 1161 HOH HOH . C 3 HOH A 73 1173 1116 HOH HOH . C 3 HOH A 74 1174 1136 HOH HOH . C 3 HOH A 75 1175 1071 HOH HOH . C 3 HOH A 76 1176 1060 HOH HOH . C 3 HOH A 77 1177 1339 HOH HOH . C 3 HOH A 78 1178 1157 HOH HOH . C 3 HOH A 79 1179 1017 HOH HOH . C 3 HOH A 80 1180 1075 HOH HOH . C 3 HOH A 81 1181 1 HOH HOH . C 3 HOH A 82 1182 1086 HOH HOH . C 3 HOH A 83 1183 1051 HOH HOH . C 3 HOH A 84 1184 8 HOH HOH . C 3 HOH A 85 1185 1130 HOH HOH . C 3 HOH A 86 1186 1029 HOH HOH . C 3 HOH A 87 1187 1041 HOH HOH . C 3 HOH A 88 1188 1065 HOH HOH . C 3 HOH A 89 1189 1150 HOH HOH . C 3 HOH A 90 1190 1113 HOH HOH . C 3 HOH A 91 1191 1126 HOH HOH . C 3 HOH A 92 1192 1030 HOH HOH . C 3 HOH A 93 1193 1037 HOH HOH . C 3 HOH A 94 1194 1160 HOH HOH . C 3 HOH A 95 1195 1212 HOH HOH . C 3 HOH A 96 1196 1204 HOH HOH . C 3 HOH A 97 1197 1019 HOH HOH . C 3 HOH A 98 1198 1035 HOH HOH . C 3 HOH A 99 1199 1114 HOH HOH . C 3 HOH A 100 1200 1178 HOH HOH . C 3 HOH A 101 1201 1083 HOH HOH . C 3 HOH A 102 1202 1082 HOH HOH . C 3 HOH A 103 1203 1174 HOH HOH . C 3 HOH A 104 1204 1152 HOH HOH . C 3 HOH A 105 1205 1018 HOH HOH . C 3 HOH A 106 1206 1133 HOH HOH . C 3 HOH A 107 1207 26 HOH HOH . C 3 HOH A 108 1208 1007 HOH HOH . C 3 HOH A 109 1209 1105 HOH HOH . C 3 HOH A 110 1210 1052 HOH HOH . C 3 HOH A 111 1211 1143 HOH HOH . C 3 HOH A 112 1212 1024 HOH HOH . C 3 HOH A 113 1213 18 HOH HOH . C 3 HOH A 114 1214 1097 HOH HOH . C 3 HOH A 115 1215 1031 HOH HOH . C 3 HOH A 116 1216 1043 HOH HOH . C 3 HOH A 117 1217 1014 HOH HOH . C 3 HOH A 118 1218 1063 HOH HOH . C 3 HOH A 119 1219 1074 HOH HOH . C 3 HOH A 120 1220 1044 HOH HOH . C 3 HOH A 121 1221 1027 HOH HOH . C 3 HOH A 122 1222 1032 HOH HOH . C 3 HOH A 123 1223 1056 HOH HOH . C 3 HOH A 124 1224 1099 HOH HOH . C 3 HOH A 125 1225 1061 HOH HOH . C 3 HOH A 126 1226 1028 HOH HOH . C 3 HOH A 127 1227 1224 HOH HOH . C 3 HOH A 128 1228 1057 HOH HOH . C 3 HOH A 129 1229 1008 HOH HOH . C 3 HOH A 130 1230 1108 HOH HOH . C 3 HOH A 131 1231 20 HOH HOH . C 3 HOH A 132 1232 1098 HOH HOH . C 3 HOH A 133 1233 12 HOH HOH . C 3 HOH A 134 1234 1165 HOH HOH . C 3 HOH A 135 1235 1169 HOH HOH . C 3 HOH A 136 1236 1372 HOH HOH . C 3 HOH A 137 1237 2 HOH HOH . C 3 HOH A 138 1238 1020 HOH HOH . C 3 HOH A 139 1239 3 HOH HOH . C 3 HOH A 140 1240 1050 HOH HOH . C 3 HOH A 141 1241 9 HOH HOH . C 3 HOH A 142 1242 1088 HOH HOH . C 3 HOH A 143 1243 5 HOH HOH . C 3 HOH A 144 1244 1254 HOH HOH . C 3 HOH A 145 1245 1073 HOH HOH . C 3 HOH A 146 1246 1287 HOH HOH . C 3 HOH A 147 1247 1053 HOH HOH . C 3 HOH A 148 1248 19 HOH HOH . C 3 HOH A 149 1249 1080 HOH HOH . C 3 HOH A 150 1250 1076 HOH HOH . C 3 HOH A 151 1251 1005 HOH HOH . C 3 HOH A 152 1252 1142 HOH HOH . C 3 HOH A 153 1253 1022 HOH HOH . C 3 HOH A 154 1254 1107 HOH HOH . C 3 HOH A 155 1255 1270 HOH HOH . C 3 HOH A 156 1256 1214 HOH HOH . C 3 HOH A 157 1257 1139 HOH HOH . C 3 HOH A 158 1258 1232 HOH HOH . C 3 HOH A 159 1259 1087 HOH HOH . C 3 HOH A 160 1260 1046 HOH HOH . C 3 HOH A 161 1261 1305 HOH HOH . C 3 HOH A 162 1262 1177 HOH HOH . C 3 HOH A 163 1263 1373 HOH HOH . C 3 HOH A 164 1264 7 HOH HOH . C 3 HOH A 165 1265 1045 HOH HOH . C 3 HOH A 166 1266 10 HOH HOH . C 3 HOH A 167 1267 1155 HOH HOH . C 3 HOH A 168 1268 1211 HOH HOH . C 3 HOH A 169 1269 1237 HOH HOH . C 3 HOH A 170 1270 1081 HOH HOH . C 3 HOH A 171 1271 11 HOH HOH . C 3 HOH A 172 1272 25 HOH HOH . C 3 HOH A 173 1273 16 HOH HOH . C 3 HOH A 174 1274 1187 HOH HOH . C 3 HOH A 175 1275 13 HOH HOH . C 3 HOH A 176 1276 21 HOH HOH . C 3 HOH A 177 1277 1106 HOH HOH . C 3 HOH A 178 1278 1208 HOH HOH . C 3 HOH A 179 1279 1334 HOH HOH . C 3 HOH A 180 1280 1192 HOH HOH . C 3 HOH A 181 1281 1103 HOH HOH . C 3 HOH A 182 1282 17 HOH HOH . C 3 HOH A 183 1283 1025 HOH HOH . C 3 HOH A 184 1284 27 HOH HOH . C 3 HOH A 185 1285 1223 HOH HOH . C 3 HOH A 186 1286 1127 HOH HOH . C 3 HOH A 187 1287 1110 HOH HOH . C 3 HOH A 188 1288 1195 HOH HOH . C 3 HOH A 189 1289 1124 HOH HOH . C 3 HOH A 190 1290 1262 HOH HOH . C 3 HOH A 191 1291 1320 HOH HOH . C 3 HOH A 192 1292 14 HOH HOH . C 3 HOH A 193 1293 1104 HOH HOH . C 3 HOH A 194 1294 1229 HOH HOH . C 3 HOH A 195 1295 1392 HOH HOH . C 3 HOH A 196 1296 1156 HOH HOH . C 3 HOH A 197 1297 1091 HOH HOH . C 3 HOH A 198 1298 15 HOH HOH . C 3 HOH A 199 1299 1196 HOH HOH . C 3 HOH A 200 1300 1067 HOH HOH . C 3 HOH A 201 1301 1184 HOH HOH . C 3 HOH A 202 1302 1275 HOH HOH . C 3 HOH A 203 1303 1194 HOH HOH . C 3 HOH A 204 1304 1180 HOH HOH . C 3 HOH A 205 1305 1154 HOH HOH . C 3 HOH A 206 1306 1115 HOH HOH . C 3 HOH A 207 1307 4 HOH HOH . C 3 HOH A 208 1308 22 HOH HOH . C 3 HOH A 209 1309 1335 HOH HOH . C 3 HOH A 210 1310 1135 HOH HOH . C 3 HOH A 211 1311 1317 HOH HOH . C 3 HOH A 212 1312 1079 HOH HOH . C 3 HOH A 213 1313 24 HOH HOH . C 3 HOH A 214 1314 1357 HOH HOH . C 3 HOH A 215 1315 1179 HOH HOH . C 3 HOH A 216 1316 1205 HOH HOH . C 3 HOH A 217 1317 1077 HOH HOH . C 3 HOH A 218 1318 1292 HOH HOH . C 3 HOH A 219 1319 1388 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . B 2 -20.182 12.322 -26.429 1 26.69 ? O1 TLA 1001 A 1 HETATM 2 O O11 TLA . . . B 2 -18.798 11.763 -24.766 1 26.98 ? O11 TLA 1001 A 1 HETATM 3 C C1 TLA . . . B 2 -19.203 12.523 -25.679 1 26.95 ? C1 TLA 1001 A 1 HETATM 4 C C2 TLA . . . B 2 -18.512 13.885 -25.79 1 27.86 ? C2 TLA 1001 A 1 HETATM 5 O O2 TLA . . . B 2 -17.296 13.903 -25.061 1 28.49 ? O2 TLA 1001 A 1 HETATM 6 C C3 TLA . . . B 2 -19.458 14.969 -25.273 1 29.14 ? C3 TLA 1001 A 1 HETATM 7 O O3 TLA . . . B 2 -19.774 14.714 -23.903 1 28.48 ? O3 TLA 1001 A 1 HETATM 8 C C4 TLA . . . B 2 -18.798 16.34 -25.472 1 31.14 ? C4 TLA 1001 A 1 HETATM 9 O O4 TLA . . . B 2 -18.666 16.748 -26.648 1 31.46 ? O4 TLA 1001 A 1 HETATM 10 O O41 TLA . . . B 2 -18.387 16.934 -24.448 1 32.27 ? O41 TLA 1001 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 10 #