data_9FXE
#
_model_server_result.job_id            vPKJBT_TX_wTnKmbvfIDNA 
_model_server_result.datetime_utc      '2024-11-05 14:35:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9fxe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    9FXE 
#
_exptl.entry_id    9FXE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              159.148 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N,2,3-etheno-2-aminopurine 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9FXE 
_cell.length_a            120.525 
_cell.length_b            120.525 
_cell.length_c            241.206 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9FXE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    'P 61 2 (x,y,z+5/12)' 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 120.603 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
#
_chem_comp.formula           'C7 H5 N5' 
_chem_comp.formula_weight    159.148 
_chem_comp.id                A1IEC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N,2,3-etheno-2-aminopurine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1~{H}-imidazo[2,1-b]purine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N01 C02 A1IEC sing 1 n y 
C02 N03 A1IEC doub 2 n y 
N03 C04 A1IEC sing 3 n y 
C04 C05 A1IEC doub 4 n y 
C05 N01 A1IEC sing 5 n y 
C04 C06 A1IEC sing 6 n y 
C06 N07 A1IEC doub 7 n y 
N07 C08 A1IEC sing 8 n y 
C08 N09 A1IEC sing 9 n y 
N09 C05 A1IEC sing 10 n y 
C08 N10 A1IEC doub 11 n y 
N10 C11 A1IEC sing 12 n y 
C11 C12 A1IEC doub 13 n y 
C12 N09 A1IEC sing 14 n y 
C02 H021 A1IEC sing 15 n n 
C06 H061 A1IEC sing 16 n n 
C11 H111 A1IEC sing 17 n n 
C12 H121 A1IEC sing 18 n n 
N01 H1 A1IEC sing 19 n n 
#
_atom_sites.entry_id                     9FXE 
_atom_sites.fract_transf_matrix[1][1]    0.008297 
_atom_sites.fract_transf_matrix[1][2]    0.00479 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009581 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004146 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 PO4 A 1 300 300 PO4 PO4 . 
E 3 A1IEC A 1 301 301 A1IEC 2AP . 
F 2 PO4 C 1 300 300 PO4 PO4 . 
G 3 A1IEC C 1 301 301 A1IEC 2AP . 
H 2 PO4 B 1 300 300 PO4 PO4 . 
I 3 A1IEC B 1 301 301 A1IEC 2AP . 
J 4 HOH A 1 401 108 HOH HOH . 
J 4 HOH A 2 402 37 HOH HOH . 
J 4 HOH A 3 403 166 HOH HOH . 
J 4 HOH A 4 404 4 HOH HOH . 
J 4 HOH A 5 405 156 HOH HOH . 
J 4 HOH A 6 406 42 HOH HOH . 
J 4 HOH A 7 407 87 HOH HOH . 
J 4 HOH A 8 408 178 HOH HOH . 
J 4 HOH A 9 409 41 HOH HOH . 
J 4 HOH A 10 410 129 HOH HOH . 
J 4 HOH A 11 411 172 HOH HOH . 
J 4 HOH A 12 412 100 HOH HOH . 
J 4 HOH A 13 413 81 HOH HOH . 
J 4 HOH A 14 414 173 HOH HOH . 
J 4 HOH A 15 415 38 HOH HOH . 
J 4 HOH A 16 416 84 HOH HOH . 
J 4 HOH A 17 417 54 HOH HOH . 
J 4 HOH A 18 418 97 HOH HOH . 
J 4 HOH A 19 419 105 HOH HOH . 
J 4 HOH A 20 420 80 HOH HOH . 
J 4 HOH A 21 421 82 HOH HOH . 
J 4 HOH A 22 422 99 HOH HOH . 
J 4 HOH A 23 423 53 HOH HOH . 
J 4 HOH A 24 424 28 HOH HOH . 
J 4 HOH A 25 425 121 HOH HOH . 
J 4 HOH A 26 426 61 HOH HOH . 
J 4 HOH A 27 427 45 HOH HOH . 
J 4 HOH A 28 428 164 HOH HOH . 
J 4 HOH A 29 429 52 HOH HOH . 
J 4 HOH A 30 430 150 HOH HOH . 
J 4 HOH A 31 431 48 HOH HOH . 
J 4 HOH A 32 432 5 HOH HOH . 
J 4 HOH A 33 433 149 HOH HOH . 
J 4 HOH A 34 434 147 HOH HOH . 
J 4 HOH A 35 435 148 HOH HOH . 
J 4 HOH A 36 436 153 HOH HOH . 
J 4 HOH A 37 437 89 HOH HOH . 
J 4 HOH A 38 438 2 HOH HOH . 
J 4 HOH A 39 439 123 HOH HOH . 
J 4 HOH A 40 440 93 HOH HOH . 
J 4 HOH A 41 441 70 HOH HOH . 
J 4 HOH A 42 442 154 HOH HOH . 
J 4 HOH A 43 443 157 HOH HOH . 
J 4 HOH A 44 444 39 HOH HOH . 
J 4 HOH A 45 445 68 HOH HOH . 
J 4 HOH A 46 446 145 HOH HOH . 
J 4 HOH A 47 447 67 HOH HOH . 
J 4 HOH A 48 448 109 HOH HOH . 
J 4 HOH A 49 449 8 HOH HOH . 
J 4 HOH A 50 450 55 HOH HOH . 
J 4 HOH A 51 451 72 HOH HOH . 
J 4 HOH A 52 452 76 HOH HOH . 
J 4 HOH A 53 453 181 HOH HOH . 
J 4 HOH A 54 454 143 HOH HOH . 
J 4 HOH A 55 455 132 HOH HOH . 
J 4 HOH A 56 456 14 HOH HOH . 
J 4 HOH A 57 457 170 HOH HOH . 
K 4 HOH C 1 401 167 HOH HOH . 
K 4 HOH C 2 402 26 HOH HOH . 
K 4 HOH C 3 403 7 HOH HOH . 
K 4 HOH C 4 404 114 HOH HOH . 
K 4 HOH C 5 405 158 HOH HOH . 
K 4 HOH C 6 406 140 HOH HOH . 
K 4 HOH C 7 407 34 HOH HOH . 
K 4 HOH C 8 408 134 HOH HOH . 
K 4 HOH C 9 409 18 HOH HOH . 
K 4 HOH C 10 410 151 HOH HOH . 
K 4 HOH C 11 411 113 HOH HOH . 
K 4 HOH C 12 412 160 HOH HOH . 
K 4 HOH C 13 413 66 HOH HOH . 
K 4 HOH C 14 414 15 HOH HOH . 
K 4 HOH C 15 415 118 HOH HOH . 
K 4 HOH C 16 416 20 HOH HOH . 
K 4 HOH C 17 417 95 HOH HOH . 
K 4 HOH C 18 418 155 HOH HOH . 
K 4 HOH C 19 419 94 HOH HOH . 
K 4 HOH C 20 420 122 HOH HOH . 
K 4 HOH C 21 421 85 HOH HOH . 
K 4 HOH C 22 422 125 HOH HOH . 
K 4 HOH C 23 423 98 HOH HOH . 
K 4 HOH C 24 424 71 HOH HOH . 
K 4 HOH C 25 425 141 HOH HOH . 
K 4 HOH C 26 426 47 HOH HOH . 
K 4 HOH C 27 427 92 HOH HOH . 
K 4 HOH C 28 428 25 HOH HOH . 
K 4 HOH C 29 429 120 HOH HOH . 
K 4 HOH C 30 430 124 HOH HOH . 
K 4 HOH C 31 431 146 HOH HOH . 
K 4 HOH C 32 432 63 HOH HOH . 
K 4 HOH C 33 433 27 HOH HOH . 
K 4 HOH C 34 434 161 HOH HOH . 
K 4 HOH C 35 435 56 HOH HOH . 
K 4 HOH C 36 436 83 HOH HOH . 
K 4 HOH C 37 437 179 HOH HOH . 
K 4 HOH C 38 438 75 HOH HOH . 
K 4 HOH C 39 439 60 HOH HOH . 
K 4 HOH C 40 440 58 HOH HOH . 
K 4 HOH C 41 441 13 HOH HOH . 
K 4 HOH C 42 442 88 HOH HOH . 
K 4 HOH C 43 443 110 HOH HOH . 
K 4 HOH C 44 444 19 HOH HOH . 
K 4 HOH C 45 445 107 HOH HOH . 
K 4 HOH C 46 446 180 HOH HOH . 
K 4 HOH C 47 447 133 HOH HOH . 
K 4 HOH C 48 448 131 HOH HOH . 
K 4 HOH C 49 449 51 HOH HOH . 
K 4 HOH C 50 450 29 HOH HOH . 
K 4 HOH C 51 451 177 HOH HOH . 
K 4 HOH C 52 452 174 HOH HOH . 
K 4 HOH C 53 453 73 HOH HOH . 
K 4 HOH C 54 454 106 HOH HOH . 
K 4 HOH C 55 455 69 HOH HOH . 
L 4 HOH B 1 401 65 HOH HOH . 
L 4 HOH B 2 402 111 HOH HOH . 
L 4 HOH B 3 403 96 HOH HOH . 
L 4 HOH B 4 404 159 HOH HOH . 
L 4 HOH B 5 405 102 HOH HOH . 
L 4 HOH B 6 406 40 HOH HOH . 
L 4 HOH B 7 407 90 HOH HOH . 
L 4 HOH B 8 408 139 HOH HOH . 
L 4 HOH B 9 409 6 HOH HOH . 
L 4 HOH B 10 410 79 HOH HOH . 
L 4 HOH B 11 411 116 HOH HOH . 
L 4 HOH B 12 412 35 HOH HOH . 
L 4 HOH B 13 413 78 HOH HOH . 
L 4 HOH B 14 414 43 HOH HOH . 
L 4 HOH B 15 415 32 HOH HOH . 
L 4 HOH B 16 416 117 HOH HOH . 
L 4 HOH B 17 417 31 HOH HOH . 
L 4 HOH B 18 418 21 HOH HOH . 
L 4 HOH B 19 419 12 HOH HOH . 
L 4 HOH B 20 420 128 HOH HOH . 
L 4 HOH B 21 421 62 HOH HOH . 
L 4 HOH B 22 422 127 HOH HOH . 
L 4 HOH B 23 423 101 HOH HOH . 
L 4 HOH B 24 424 44 HOH HOH . 
L 4 HOH B 25 425 103 HOH HOH . 
L 4 HOH B 26 426 168 HOH HOH . 
L 4 HOH B 27 427 33 HOH HOH . 
L 4 HOH B 28 428 16 HOH HOH . 
L 4 HOH B 29 429 162 HOH HOH . 
L 4 HOH B 30 430 136 HOH HOH . 
L 4 HOH B 31 431 17 HOH HOH . 
L 4 HOH B 32 432 135 HOH HOH . 
L 4 HOH B 33 433 57 HOH HOH . 
L 4 HOH B 34 434 10 HOH HOH . 
L 4 HOH B 35 435 24 HOH HOH . 
L 4 HOH B 36 436 144 HOH HOH . 
L 4 HOH B 37 437 9 HOH HOH . 
L 4 HOH B 38 438 163 HOH HOH . 
L 4 HOH B 39 439 64 HOH HOH . 
L 4 HOH B 40 440 137 HOH HOH . 
L 4 HOH B 41 441 119 HOH HOH . 
L 4 HOH B 42 442 23 HOH HOH . 
L 4 HOH B 43 443 36 HOH HOH . 
L 4 HOH B 44 444 22 HOH HOH . 
L 4 HOH B 45 445 130 HOH HOH . 
L 4 HOH B 46 446 50 HOH HOH . 
L 4 HOH B 47 447 86 HOH HOH . 
L 4 HOH B 48 448 152 HOH HOH . 
L 4 HOH B 49 449 77 HOH HOH . 
L 4 HOH B 50 450 104 HOH HOH . 
L 4 HOH B 51 451 11 HOH HOH . 
L 4 HOH B 52 452 115 HOH HOH . 
L 4 HOH B 53 453 74 HOH HOH . 
L 4 HOH B 54 454 142 HOH HOH . 
L 4 HOH B 55 455 165 HOH HOH . 
L 4 HOH B 56 456 49 HOH HOH . 
L 4 HOH B 57 457 176 HOH HOH . 
L 4 HOH B 58 458 182 HOH HOH . 
L 4 HOH B 59 459 3 HOH HOH . 
L 4 HOH B 60 460 175 HOH HOH . 
L 4 HOH B 61 461 91 HOH HOH . 
L 4 HOH B 62 462 138 HOH HOH . 
L 4 HOH B 63 463 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C02 A1IEC . . . E 3 -19.291 67.813 67.024 1 42.97 ? C02 A1IEC 301 A 1 
HETATM 2 C C04 A1IEC . . . E 3 -18.04 69.541 66.754 1 38.39 ? C04 A1IEC 301 A 1 
HETATM 3 C C05 A1IEC . . . E 3 -19.067 69.574 65.805 1 39.23 ? C05 A1IEC 301 A 1 
HETATM 4 C C06 A1IEC . . . E 3 -17.115 70.588 66.741 1 34.98 ? C06 A1IEC 301 A 1 
HETATM 5 C C08 A1IEC . . . E 3 -18.228 71.552 64.974 1 37.72 ? C08 A1IEC 301 A 1 
HETATM 6 C C11 A1IEC . . . E 3 -19.717 71.915 63.359 1 37.55 ? C11 A1IEC 301 A 1 
HETATM 7 C C12 A1IEC . . . E 3 -19.887 70.855 64.042 1 36.83 ? C12 A1IEC 301 A 1 
HETATM 8 N N01 A1IEC . . . E 3 -19.811 68.494 66.009 1 39.42 ? N01 A1IEC 301 A 1 
HETATM 9 N N03 A1IEC . . . E 3 -18.211 68.446 67.483 1 41.77 ? N03 A1IEC 301 A 1 
HETATM 10 N N07 A1IEC . . . E 3 -17.244 71.563 65.85 1 37.7 ? N07 A1IEC 301 A 1 
HETATM 11 N N09 A1IEC . . . E 3 -19.135 70.556 64.944 1 38.87 ? N09 A1IEC 301 A 1 
HETATM 12 N N10 A1IEC . . . E 3 -18.605 72.469 63.908 1 33.52 ? N10 A1IEC 301 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           12 
#