data_9FXF # _model_server_result.job_id WGmy329uhhnQcSE9sC8SEQ _model_server_result.datetime_utc '2024-11-16 04:43:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fxf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 9FXF # _exptl.entry_id 9FXF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 216.317 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '12-HYDROXYDODECANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.93 _cell.angle_gamma 90 _cell.entry_id 9FXF _cell.length_a 88.022 _cell.length_b 34.951 _cell.length_c 46.269 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FXF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.07 ? disulf ? disulf2 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.017 ? disulf ? disulf3 A SG CYS 50 A CYS 50 1_555 A SG CYS 107 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? # _chem_comp.formula 'C12 H24 O3' _chem_comp.formula_weight 216.317 _chem_comp.id 12H _chem_comp.mon_nstd_flag . _chem_comp.name '12-HYDROXYDODECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 12H sing 1 n n C1 O13 12H sing 2 n n C1 H11 12H sing 3 n n C1 H12 12H sing 4 n n C2 C3 12H sing 5 n n C2 H21 12H sing 6 n n C2 H22 12H sing 7 n n C3 C4 12H sing 8 n n C3 H31 12H sing 9 n n C3 H32 12H sing 10 n n C4 C5 12H sing 11 n n C4 H41 12H sing 12 n n C4 H42 12H sing 13 n n C5 C6 12H sing 14 n n C5 H51 12H sing 15 n n C5 H52 12H sing 16 n n C6 C7 12H sing 17 n n C6 H61 12H sing 18 n n C6 H62 12H sing 19 n n C7 C8 12H sing 20 n n C7 H71 12H sing 21 n n C7 H72 12H sing 22 n n C8 C9 12H sing 23 n n C8 H81 12H sing 24 n n C8 H82 12H sing 25 n n C9 C10 12H sing 26 n n C9 H91 12H sing 27 n n C9 H92 12H sing 28 n n C10 C11 12H sing 29 n n C10 H101 12H sing 30 n n C10 H102 12H sing 31 n n C11 C12 12H sing 32 n n C11 H111 12H sing 33 n n C11 H112 12H sing 34 n n C12 O14 12H doub 35 n n C12 O15 12H sing 36 n n O13 H13 12H sing 37 n n O15 H15 12H sing 38 n n # _atom_sites.entry_id 9FXF _atom_sites.fract_transf_matrix[1][1] 0.011361 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003896 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022848 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 201 1 PO4 PO4 . C 3 12H A 1 202 1 12H PEG . D 4 HOH A 1 301 52 HOH HOH . D 4 HOH A 2 302 17 HOH HOH . D 4 HOH A 3 303 62 HOH HOH . D 4 HOH A 4 304 104 HOH HOH . D 4 HOH A 5 305 74 HOH HOH . D 4 HOH A 6 306 93 HOH HOH . D 4 HOH A 7 307 9 HOH HOH . D 4 HOH A 8 308 4 HOH HOH . D 4 HOH A 9 309 50 HOH HOH . D 4 HOH A 10 310 69 HOH HOH . D 4 HOH A 11 311 55 HOH HOH . D 4 HOH A 12 312 95 HOH HOH . D 4 HOH A 13 313 27 HOH HOH . D 4 HOH A 14 314 101 HOH HOH . D 4 HOH A 15 315 72 HOH HOH . D 4 HOH A 16 316 6 HOH HOH . D 4 HOH A 17 317 21 HOH HOH . D 4 HOH A 18 318 8 HOH HOH . D 4 HOH A 19 319 1 HOH HOH . D 4 HOH A 20 320 40 HOH HOH . D 4 HOH A 21 321 30 HOH HOH . D 4 HOH A 22 322 39 HOH HOH . D 4 HOH A 23 323 13 HOH HOH . D 4 HOH A 24 324 57 HOH HOH . D 4 HOH A 25 325 14 HOH HOH . D 4 HOH A 26 326 18 HOH HOH . D 4 HOH A 27 327 75 HOH HOH . D 4 HOH A 28 328 16 HOH HOH . D 4 HOH A 29 329 45 HOH HOH . D 4 HOH A 30 330 12 HOH HOH . D 4 HOH A 31 331 60 HOH HOH . D 4 HOH A 32 332 26 HOH HOH . D 4 HOH A 33 333 78 HOH HOH . D 4 HOH A 34 334 96 HOH HOH . D 4 HOH A 35 335 97 HOH HOH . D 4 HOH A 36 336 68 HOH HOH . D 4 HOH A 37 337 67 HOH HOH . D 4 HOH A 38 338 34 HOH HOH . D 4 HOH A 39 339 41 HOH HOH . D 4 HOH A 40 340 25 HOH HOH . D 4 HOH A 41 341 31 HOH HOH . D 4 HOH A 42 342 28 HOH HOH . D 4 HOH A 43 343 2 HOH HOH . D 4 HOH A 44 344 32 HOH HOH . D 4 HOH A 45 345 35 HOH HOH . D 4 HOH A 46 346 19 HOH HOH . D 4 HOH A 47 347 22 HOH HOH . D 4 HOH A 48 348 94 HOH HOH . D 4 HOH A 49 349 10 HOH HOH . D 4 HOH A 50 350 11 HOH HOH . D 4 HOH A 51 351 61 HOH HOH . D 4 HOH A 52 352 65 HOH HOH . D 4 HOH A 53 353 43 HOH HOH . D 4 HOH A 54 354 5 HOH HOH . D 4 HOH A 55 355 71 HOH HOH . D 4 HOH A 56 356 59 HOH HOH . D 4 HOH A 57 357 3 HOH HOH . D 4 HOH A 58 358 46 HOH HOH . D 4 HOH A 59 359 102 HOH HOH . D 4 HOH A 60 360 56 HOH HOH . D 4 HOH A 61 361 24 HOH HOH . D 4 HOH A 62 362 51 HOH HOH . D 4 HOH A 63 363 7 HOH HOH . D 4 HOH A 64 364 58 HOH HOH . D 4 HOH A 65 365 63 HOH HOH . D 4 HOH A 66 366 38 HOH HOH . D 4 HOH A 67 367 48 HOH HOH . D 4 HOH A 68 368 54 HOH HOH . D 4 HOH A 69 369 66 HOH HOH . D 4 HOH A 70 370 37 HOH HOH . D 4 HOH A 71 371 64 HOH HOH . D 4 HOH A 72 372 98 HOH HOH . D 4 HOH A 73 373 100 HOH HOH . D 4 HOH A 74 374 44 HOH HOH . D 4 HOH A 75 375 15 HOH HOH . D 4 HOH A 76 376 33 HOH HOH . D 4 HOH A 77 377 36 HOH HOH . D 4 HOH A 78 378 49 HOH HOH . D 4 HOH A 79 379 47 HOH HOH . D 4 HOH A 80 380 29 HOH HOH . D 4 HOH A 81 381 23 HOH HOH . D 4 HOH A 82 382 103 HOH HOH . D 4 HOH A 83 383 20 HOH HOH . D 4 HOH A 84 384 76 HOH HOH . D 4 HOH A 85 385 99 HOH HOH . D 4 HOH A 86 386 70 HOH HOH . D 4 HOH A 87 387 53 HOH HOH . D 4 HOH A 88 388 42 HOH HOH . D 4 HOH A 89 389 86 HOH HOH . D 4 HOH A 90 390 91 HOH HOH . D 4 HOH A 91 391 83 HOH HOH . D 4 HOH A 92 392 89 HOH HOH . D 4 HOH A 93 393 88 HOH HOH . D 4 HOH A 94 394 84 HOH HOH . D 4 HOH A 95 395 73 HOH HOH . D 4 HOH A 96 396 80 HOH HOH . D 4 HOH A 97 397 87 HOH HOH . D 4 HOH A 98 398 81 HOH HOH . D 4 HOH A 99 399 79 HOH HOH . D 4 HOH A 100 400 77 HOH HOH . D 4 HOH A 101 401 92 HOH HOH . D 4 HOH A 102 402 85 HOH HOH . D 4 HOH A 103 403 90 HOH HOH . D 4 HOH A 104 404 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 12H . . . C 3 -8.605 2.552 27.579 0.5 13.45 ? C1 12H 202 A 1 HETATM 2 C C2 12H . . . C 3 -7.708 2.688 26.352 0.5 10.47 ? C2 12H 202 A 1 HETATM 3 C C3 12H . . . C 3 -7.131 4.078 26.194 0.5 9.71 ? C3 12H 202 A 1 HETATM 4 C C4 12H . . . C 3 -6.433 4.211 24.841 0.5 7.55 ? C4 12H 202 A 1 HETATM 5 C C5 12H . . . C 3 -7.48 3.892 23.785 0.5 5.21 ? C5 12H 202 A 1 HETATM 6 C C6 12H . . . C 3 -6.97 4.086 22.4 0.5 6.33 ? C6 12H 202 A 1 HETATM 7 C C7 12H . . . C 3 -8.117 3.699 21.518 0.5 6.35 ? C7 12H 202 A 1 HETATM 8 C C8 12H . . . C 3 -7.587 4.022 20.165 0.5 3.8 ? C8 12H 202 A 1 HETATM 9 C C9 12H . . . C 3 -8.704 3.825 19.177 0.5 6.75 ? C9 12H 202 A 1 HETATM 10 C C10 12H . . . C 3 -8.176 4.183 17.814 0.5 7.6 ? C10 12H 202 A 1 HETATM 11 C C11 12H . . . C 3 -7.383 2.994 17.34 0.5 5.73 ? C11 12H 202 A 1 HETATM 12 C C12 12H . . . C 3 -6.91 3.139 15.919 0.5 9.13 ? C12 12H 202 A 1 HETATM 13 O O13 12H . . . C 3 -9.481 1.412 27.449 0.5 15.6 ? O13 12H 202 A 1 HETATM 14 O O14 12H . . . C 3 -6.388 1.849 15.536 0.5 13.32 ? O14 12H 202 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 14 #