data_9FXN # _model_server_result.job_id ez2AaAnP3F3qmmLqc8dX8w _model_server_result.datetime_utc '2024-10-12 14:25:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fxn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 9FXN # _exptl.entry_id 9FXN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.51 _cell.angle_gamma 90 _cell.entry_id 9FXN _cell.length_a 73.55 _cell.length_b 83.56 _cell.length_c 74.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FXN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 237 A CYS 294 1_555 A SG CYS 242 A CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 B SG CYS 237 B CYS 294 1_555 B SG CYS 242 B CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A OD1 ASN 114 A ASN 171 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc2 C MG MG . A MG 401 1_555 E O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc3 C MG MG . A MG 401 1_555 E O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc4 C MG MG . A MG 401 1_555 E O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc5 C MG MG . A MG 401 1_555 E O HOH . A HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc6 C MG MG . A MG 401 1_555 E O HOH . A HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc7 B OD1 ASN 114 B ASN 171 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc8 D MG MG . B MG 401 1_555 F O HOH . B HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc9 D MG MG . B MG 401 1_555 F O HOH . B HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc10 D MG MG . B MG 401 1_555 F O HOH . B HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc11 D MG MG . B MG 401 1_555 F O HOH . B HOH 572 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc12 D MG MG . B MG 401 1_555 F O HOH . B HOH 578 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9FXN _atom_sites.fract_transf_matrix[1][1] 0.013596 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005915 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011967 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 1 MG MG . D 2 MG B 1 401 2 MG MG . E 3 HOH A 1 501 219 HOH HOH . E 3 HOH A 2 502 64 HOH HOH . E 3 HOH A 3 503 223 HOH HOH . E 3 HOH A 4 504 157 HOH HOH . E 3 HOH A 5 505 36 HOH HOH . E 3 HOH A 6 506 88 HOH HOH . E 3 HOH A 7 507 137 HOH HOH . E 3 HOH A 8 508 107 HOH HOH . E 3 HOH A 9 509 249 HOH HOH . E 3 HOH A 10 510 99 HOH HOH . E 3 HOH A 11 511 229 HOH HOH . E 3 HOH A 12 512 156 HOH HOH . E 3 HOH A 13 513 202 HOH HOH . E 3 HOH A 14 514 93 HOH HOH . E 3 HOH A 15 515 66 HOH HOH . E 3 HOH A 16 516 161 HOH HOH . E 3 HOH A 17 517 12 HOH HOH . E 3 HOH A 18 518 112 HOH HOH . E 3 HOH A 19 519 10 HOH HOH . E 3 HOH A 20 520 40 HOH HOH . E 3 HOH A 21 521 55 HOH HOH . E 3 HOH A 22 522 216 HOH HOH . E 3 HOH A 23 523 7 HOH HOH . E 3 HOH A 24 524 212 HOH HOH . E 3 HOH A 25 525 147 HOH HOH . E 3 HOH A 26 526 257 HOH HOH . E 3 HOH A 27 527 98 HOH HOH . E 3 HOH A 28 528 199 HOH HOH . E 3 HOH A 29 529 30 HOH HOH . E 3 HOH A 30 530 132 HOH HOH . E 3 HOH A 31 531 196 HOH HOH . E 3 HOH A 32 532 49 HOH HOH . E 3 HOH A 33 533 191 HOH HOH . E 3 HOH A 34 534 134 HOH HOH . E 3 HOH A 35 535 123 HOH HOH . E 3 HOH A 36 536 3 HOH HOH . E 3 HOH A 37 537 20 HOH HOH . E 3 HOH A 38 538 71 HOH HOH . E 3 HOH A 39 539 92 HOH HOH . E 3 HOH A 40 540 143 HOH HOH . E 3 HOH A 41 541 21 HOH HOH . E 3 HOH A 42 542 5 HOH HOH . E 3 HOH A 43 543 68 HOH HOH . E 3 HOH A 44 544 28 HOH HOH . E 3 HOH A 45 545 187 HOH HOH . E 3 HOH A 46 546 51 HOH HOH . E 3 HOH A 47 547 243 HOH HOH . E 3 HOH A 48 548 228 HOH HOH . E 3 HOH A 49 549 17 HOH HOH . E 3 HOH A 50 550 87 HOH HOH . E 3 HOH A 51 551 31 HOH HOH . E 3 HOH A 52 552 213 HOH HOH . E 3 HOH A 53 553 174 HOH HOH . E 3 HOH A 54 554 33 HOH HOH . E 3 HOH A 55 555 34 HOH HOH . E 3 HOH A 56 556 75 HOH HOH . E 3 HOH A 57 557 116 HOH HOH . E 3 HOH A 58 558 53 HOH HOH . E 3 HOH A 59 559 63 HOH HOH . E 3 HOH A 60 560 164 HOH HOH . E 3 HOH A 61 561 56 HOH HOH . E 3 HOH A 62 562 158 HOH HOH . E 3 HOH A 63 563 180 HOH HOH . E 3 HOH A 64 564 45 HOH HOH . E 3 HOH A 65 565 11 HOH HOH . E 3 HOH A 66 566 235 HOH HOH . E 3 HOH A 67 567 194 HOH HOH . E 3 HOH A 68 568 251 HOH HOH . E 3 HOH A 69 569 83 HOH HOH . E 3 HOH A 70 570 149 HOH HOH . E 3 HOH A 71 571 192 HOH HOH . E 3 HOH A 72 572 122 HOH HOH . E 3 HOH A 73 573 232 HOH HOH . E 3 HOH A 74 574 26 HOH HOH . E 3 HOH A 75 575 119 HOH HOH . E 3 HOH A 76 576 207 HOH HOH . E 3 HOH A 77 577 61 HOH HOH . E 3 HOH A 78 578 103 HOH HOH . E 3 HOH A 79 579 32 HOH HOH . E 3 HOH A 80 580 214 HOH HOH . E 3 HOH A 81 581 74 HOH HOH . E 3 HOH A 82 582 86 HOH HOH . E 3 HOH A 83 583 237 HOH HOH . E 3 HOH A 84 584 159 HOH HOH . E 3 HOH A 85 585 208 HOH HOH . E 3 HOH A 86 586 171 HOH HOH . E 3 HOH A 87 587 153 HOH HOH . E 3 HOH A 88 588 222 HOH HOH . E 3 HOH A 89 589 42 HOH HOH . E 3 HOH A 90 590 186 HOH HOH . E 3 HOH A 91 591 127 HOH HOH . E 3 HOH A 92 592 105 HOH HOH . E 3 HOH A 93 593 136 HOH HOH . E 3 HOH A 94 594 121 HOH HOH . E 3 HOH A 95 595 59 HOH HOH . E 3 HOH A 96 596 91 HOH HOH . E 3 HOH A 97 597 205 HOH HOH . E 3 HOH A 98 598 175 HOH HOH . E 3 HOH A 99 599 114 HOH HOH . E 3 HOH A 100 600 126 HOH HOH . E 3 HOH A 101 601 197 HOH HOH . E 3 HOH A 102 602 89 HOH HOH . E 3 HOH A 103 603 102 HOH HOH . E 3 HOH A 104 604 130 HOH HOH . E 3 HOH A 105 605 96 HOH HOH . E 3 HOH A 106 606 85 HOH HOH . E 3 HOH A 107 607 209 HOH HOH . E 3 HOH A 108 608 163 HOH HOH . E 3 HOH A 109 609 65 HOH HOH . E 3 HOH A 110 610 259 HOH HOH . E 3 HOH A 111 611 6 HOH HOH . E 3 HOH A 112 612 172 HOH HOH . E 3 HOH A 113 613 1 HOH HOH . E 3 HOH A 114 614 2 HOH HOH . E 3 HOH A 115 615 226 HOH HOH . E 3 HOH A 116 616 168 HOH HOH . E 3 HOH A 117 617 188 HOH HOH . E 3 HOH A 118 618 241 HOH HOH . E 3 HOH A 119 619 151 HOH HOH . E 3 HOH A 120 620 261 HOH HOH . F 3 HOH B 1 501 221 HOH HOH . F 3 HOH B 2 502 253 HOH HOH . F 3 HOH B 3 503 165 HOH HOH . F 3 HOH B 4 504 238 HOH HOH . F 3 HOH B 5 505 190 HOH HOH . F 3 HOH B 6 506 62 HOH HOH . F 3 HOH B 7 507 245 HOH HOH . F 3 HOH B 8 508 115 HOH HOH . F 3 HOH B 9 509 218 HOH HOH . F 3 HOH B 10 510 82 HOH HOH . F 3 HOH B 11 511 78 HOH HOH . F 3 HOH B 12 512 80 HOH HOH . F 3 HOH B 13 513 54 HOH HOH . F 3 HOH B 14 514 81 HOH HOH . F 3 HOH B 15 515 25 HOH HOH . F 3 HOH B 16 516 60 HOH HOH . F 3 HOH B 17 517 170 HOH HOH . F 3 HOH B 18 518 239 HOH HOH . F 3 HOH B 19 519 184 HOH HOH . F 3 HOH B 20 520 8 HOH HOH . F 3 HOH B 21 521 131 HOH HOH . F 3 HOH B 22 522 100 HOH HOH . F 3 HOH B 23 523 18 HOH HOH . F 3 HOH B 24 524 193 HOH HOH . F 3 HOH B 25 525 110 HOH HOH . F 3 HOH B 26 526 178 HOH HOH . F 3 HOH B 27 527 206 HOH HOH . F 3 HOH B 28 528 35 HOH HOH . F 3 HOH B 29 529 236 HOH HOH . F 3 HOH B 30 530 46 HOH HOH . F 3 HOH B 31 531 47 HOH HOH . F 3 HOH B 32 532 4 HOH HOH . F 3 HOH B 33 533 173 HOH HOH . F 3 HOH B 34 534 144 HOH HOH . F 3 HOH B 35 535 24 HOH HOH . F 3 HOH B 36 536 37 HOH HOH . F 3 HOH B 37 537 117 HOH HOH . F 3 HOH B 38 538 179 HOH HOH . F 3 HOH B 39 539 124 HOH HOH . F 3 HOH B 40 540 120 HOH HOH . F 3 HOH B 41 541 210 HOH HOH . F 3 HOH B 42 542 23 HOH HOH . F 3 HOH B 43 543 15 HOH HOH . F 3 HOH B 44 544 39 HOH HOH . F 3 HOH B 45 545 129 HOH HOH . F 3 HOH B 46 546 176 HOH HOH . F 3 HOH B 47 547 57 HOH HOH . F 3 HOH B 48 548 155 HOH HOH . F 3 HOH B 49 549 189 HOH HOH . F 3 HOH B 50 550 13 HOH HOH . F 3 HOH B 51 551 94 HOH HOH . F 3 HOH B 52 552 142 HOH HOH . F 3 HOH B 53 553 244 HOH HOH . F 3 HOH B 54 554 106 HOH HOH . F 3 HOH B 55 555 77 HOH HOH . F 3 HOH B 56 556 111 HOH HOH . F 3 HOH B 57 557 148 HOH HOH . F 3 HOH B 58 558 145 HOH HOH . F 3 HOH B 59 559 108 HOH HOH . F 3 HOH B 60 560 260 HOH HOH . F 3 HOH B 61 561 48 HOH HOH . F 3 HOH B 62 562 109 HOH HOH . F 3 HOH B 63 563 139 HOH HOH . F 3 HOH B 64 564 79 HOH HOH . F 3 HOH B 65 565 95 HOH HOH . F 3 HOH B 66 566 41 HOH HOH . F 3 HOH B 67 567 240 HOH HOH . F 3 HOH B 68 568 69 HOH HOH . F 3 HOH B 69 569 73 HOH HOH . F 3 HOH B 70 570 146 HOH HOH . F 3 HOH B 71 571 135 HOH HOH . F 3 HOH B 72 572 22 HOH HOH . F 3 HOH B 73 573 258 HOH HOH . F 3 HOH B 74 574 16 HOH HOH . F 3 HOH B 75 575 252 HOH HOH . F 3 HOH B 76 576 204 HOH HOH . F 3 HOH B 77 577 101 HOH HOH . F 3 HOH B 78 578 9 HOH HOH . F 3 HOH B 79 579 225 HOH HOH . F 3 HOH B 80 580 44 HOH HOH . F 3 HOH B 81 581 198 HOH HOH . F 3 HOH B 82 582 29 HOH HOH . F 3 HOH B 83 583 177 HOH HOH . F 3 HOH B 84 584 141 HOH HOH . F 3 HOH B 85 585 43 HOH HOH . F 3 HOH B 86 586 104 HOH HOH . F 3 HOH B 87 587 38 HOH HOH . F 3 HOH B 88 588 242 HOH HOH . F 3 HOH B 89 589 195 HOH HOH . F 3 HOH B 90 590 58 HOH HOH . F 3 HOH B 91 591 182 HOH HOH . F 3 HOH B 92 592 19 HOH HOH . F 3 HOH B 93 593 138 HOH HOH . F 3 HOH B 94 594 27 HOH HOH . F 3 HOH B 95 595 185 HOH HOH . F 3 HOH B 96 596 118 HOH HOH . F 3 HOH B 97 597 125 HOH HOH . F 3 HOH B 98 598 247 HOH HOH . F 3 HOH B 99 599 90 HOH HOH . F 3 HOH B 100 600 183 HOH HOH . F 3 HOH B 101 601 248 HOH HOH . F 3 HOH B 102 602 72 HOH HOH . F 3 HOH B 103 603 150 HOH HOH . F 3 HOH B 104 604 52 HOH HOH . F 3 HOH B 105 605 97 HOH HOH . F 3 HOH B 106 606 224 HOH HOH . F 3 HOH B 107 607 227 HOH HOH . F 3 HOH B 108 608 200 HOH HOH . F 3 HOH B 109 609 84 HOH HOH . F 3 HOH B 110 610 140 HOH HOH . F 3 HOH B 111 611 76 HOH HOH . F 3 HOH B 112 612 255 HOH HOH . F 3 HOH B 113 613 201 HOH HOH . F 3 HOH B 114 614 160 HOH HOH . F 3 HOH B 115 615 133 HOH HOH . F 3 HOH B 116 616 70 HOH HOH . F 3 HOH B 117 617 67 HOH HOH . F 3 HOH B 118 618 113 HOH HOH . F 3 HOH B 119 619 169 HOH HOH . F 3 HOH B 120 620 215 HOH HOH . F 3 HOH B 121 621 154 HOH HOH . F 3 HOH B 122 622 152 HOH HOH . F 3 HOH B 123 623 162 HOH HOH . F 3 HOH B 124 624 166 HOH HOH . F 3 HOH B 125 625 250 HOH HOH . F 3 HOH B 126 626 233 HOH HOH . F 3 HOH B 127 627 246 HOH HOH . F 3 HOH B 128 628 167 HOH HOH . F 3 HOH B 129 629 128 HOH HOH . F 3 HOH B 130 630 231 HOH HOH . F 3 HOH B 131 631 220 HOH HOH . F 3 HOH B 132 632 211 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -32.383 _atom_site.Cartn_y 12.526 _atom_site.Cartn_z -45.92 _atom_site.occupancy 0.39 _atom_site.B_iso_or_equiv 27.28 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 102 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #